Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30682.Seq
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 130 2e-30
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 125 5e-29
08_02_0657 - 19749835-19751942,19753123-19753561 100 3e-21
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 42 8e-04
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 42 8e-04
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 37 0.021
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 37 0.021
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 37 0.021
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 37 0.021
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 36 0.037
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 36 0.037
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 36 0.037
09_06_0271 + 21959213-21960559 34 0.15
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 31 0.80
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 31 0.80
01_01_0886 - 6970112-6970225,6970357-6970473,6970567-6970635,697... 31 0.80
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 31 1.4
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 29 4.3
06_01_0057 - 483710-484309 29 4.3
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 29 4.3
06_01_0065 + 549972-550770,551577-552190,552392-552544,552769-55... 28 7.5
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 28 7.5
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 7.5
04_03_0179 - 12304726-12304782,12305509-12305601,12305729-123058... 28 9.9
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 130 bits (313), Expect = 2e-30
Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVL+DD C + KIRM DVVS+ CP VKYGKRVHIL
Sbjct: 65 LLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHIL 124
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLF+ +LKPYF+EAYRP+ + D F G S K I A +
Sbjct: 125 PIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGG---MRSVEFKVIETDPAEYC 181
Query: 583 LI-P*YTVTVNRLNVRKKRKH*MLS-GYDDIGGCRKQLGAN*GDGGVATASSFTVQGYWS 756
++ P + + ++++ + + GYDD+GG RKQ+ + +
Sbjct: 182 IVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV 241
Query: 757 EAPRGILMYG 786
+ P+GIL+YG
Sbjct: 242 KPPKGILLYG 251
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
+D K D STAIL RK PNRL+V+EA +DDNSV+ + ME+LQLFRGDTVLLKGK+
Sbjct: 11 SDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKK 70
Query: 242 RKETV 256
RK+T+
Sbjct: 71 RKDTI 75
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +2
Query: 677 VANNWAQIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
V AQI+E+VELPLRHP LFK+IGVK GPPG
Sbjct: 215 VRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG 254
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E V+ P+ HP F+ G+ GPPG
Sbjct: 494 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 527
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 125 bits (301), Expect = 5e-29
Identities = 69/189 (36%), Positives = 102/189 (53%), Gaps = 1/189 (0%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVL+D+ C + KIRM DVVS+ C VKYGKRVHIL
Sbjct: 65 LLKGKKRKDTICIVLADETCEEPKIRMNKVVRKNLRVRLGDVVSVHQCQDVKYGKRVHIL 124
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLF+ +LKPYF+EAYRP+ + D F G K + + +
Sbjct: 125 PIDDTVEGITGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPTEYC--I 182
Query: 583 LIP*YTVTVNRLNVRKKRKH*MLS-GYDDIGGCRKQLGAN*GDGGVATASSFTVQGYWSE 759
+ P + + ++++ + + GYDD+GG RKQ+ + + +
Sbjct: 183 VAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 242
Query: 760 APRGILMYG 786
P+GIL+YG
Sbjct: 243 PPKGILLYG 251
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD K D STAIL RK PNRL+V+EA +DDNSVVAL ME+LQLFRGDTVLLKGK+
Sbjct: 11 ADPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKK 70
Query: 242 RKETV 256
RK+T+
Sbjct: 71 RKDTI 75
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 656
VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIKRE+EE L+ VG
Sbjct: 161 VRGGMRSVEFKVIETDPTEYCIVAPDTEIFCDGEPIKREDEER-LDEVG 208
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +2
Query: 677 VANNWAQIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
V AQI+E+VELPLRHP LFK+IGVK GPPG
Sbjct: 215 VRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG 254
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 99.5 bits (237), Expect = 3e-21
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Frame = +1
Query: 256 CIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTG 435
C D++CPD ++R+ D+V++ PCP+++ KRV + P DDSVEG++G
Sbjct: 79 CYAQKDESCPDGRLRLSRGVRSNLHVRLGDLVTVKPCPTIRNAKRVQLRPFDDSVEGISG 138
Query: 436 NLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWLLIP*YTVTVNR 615
+LFE YLKPYFM+A RP+ + D F G K + ++ + +
Sbjct: 139 DLFEPYLKPYFMDALRPVKKGDRFLVRGHMHAVEFK-VMDTEPNNEPVIVAGDTEIFCDE 197
Query: 616 LNVRKKRKH*MLS--GYDDIGGCRKQLGAN*GDGGVATASSFTVQGYWSEAPRGILMYG 786
+ K+ L GYDD+GG RKQL + Q P+GIL+YG
Sbjct: 198 GDPVKREDEERLDGPGYDDVGGVRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYG 256
Score = 62.5 bits (145), Expect = 4e-10
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Frame = +2
Query: 83 DLSTAILR--RKDRPNRLIVEEA---VSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRK 247
D STAIL +K PNRL+ ++A V+ DNS V LS+A ME+L +FRGD V L+G+RR+
Sbjct: 16 DYSTAILECAKKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRR 75
Query: 248 ETV 256
E V
Sbjct: 76 EAV 78
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDP-SPFCIVAPDTVIHCD-GEPIKREEEE 635
VRG M AVEFKV++T+P + IVA DT I CD G+P+KRE+EE
Sbjct: 164 VRGHMHAVEFKVMDTEPNNEPVIVAGDTEIFCDEGDPVKREDEE 207
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2
Query: 677 VANNWAQIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
V AQI+E+VELPLRHP LF+ +GV+ GPPG
Sbjct: 220 VRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPG 259
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E V+ P+ HP +F G+ GPPG
Sbjct: 500 ELQETVQYPVEHPEMFDLFGMSPSRGVLFYGPPG 533
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 41.5 bits (93), Expect = 8e-04
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE++ELP++HP LF+++G+ GPPG
Sbjct: 199 EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 232
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 41.5 bits (93), Expect = 8e-04
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE++ELP++HP LF+++G+ GPPG
Sbjct: 177 EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 210
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE VELPL HP L++ IG++ G PG
Sbjct: 218 EIKEAVELPLTHPELYEDIGIRPPKGVILYGEPG 251
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+VELP+ HP F +G+ C GPPG
Sbjct: 179 KMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE VELPL HP L++ IG++ G PG
Sbjct: 240 EIKEAVELPLTHPELYEDIGIRPPKGVILYGEPG 273
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+VELP+ HP F +G+ C GPPG
Sbjct: 179 KMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 35.9 bits (79), Expect = 0.037
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E +ELPL +P LF +G+K GPPG
Sbjct: 152 ELRESIELPLMNPKLFLRVGIKPPKGVLLYGPPG 185
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+I+E VELPL H L+K IG+ GPPG
Sbjct: 126 EIREAVELPLTHHELYKQIGIDPPRGVLLYGPPG 159
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 35.9 bits (79), Expect = 0.037
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E +ELPL +P LF +G+K GPPG
Sbjct: 151 ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPG 184
>09_06_0271 + 21959213-21960559
Length = 448
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E VELPL HP LF A GV GP G
Sbjct: 201 EVREAVELPLTHPELFAAAGVDPPRGVLLHGPLG 234
>11_01_0737 +
6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
Q+ E +ELP ++P F+ +GV +GPPG
Sbjct: 743 QLIEAIELPQKNPKAFENMGVSPPRGLLMIGPPG 776
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 698 IKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
++E+V LPLR P LFK +K GPPG
Sbjct: 513 LQELVMLPLRRPDLFKGGLLKPCRGILLFGPPG 545
>01_01_0886 -
6970112-6970225,6970357-6970473,6970567-6970635,
6970711-6970849,6970964-6971532,6971799-6971966,
6972097-6972184,6972260-6972818,6972924-6973024,
6973113-6973155,6973845-6973938,6974160-6974215,
6974460-6974581,6975306-6975517
Length = 816
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 698 IKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
++E+V LPLR P LFK +K GPPG
Sbjct: 520 LQELVMLPLRRPDLFKGGLLKPCRGILLFGPPG 552
>08_02_1554 +
27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 698 IKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
IKE +ELP ++P++F V+L + GP G
Sbjct: 804 IKETLELPSKYPNIFTKAPVRLRSNILLYGPSG 836
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 695 QIKEMVE---LPLRHPSLFKAIGVKLHAAFSCMGPPG 796
QI+E+VE LP+ H F+ +G++ GPPG
Sbjct: 170 QIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPG 206
>06_01_0057 - 483710-484309
Length = 199
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 87 YRPRSSVARTDPTVSLSKKQSAMTTQS-WHFHRPKWSNFNSSVVTQSCSR 233
Y P ART P ++ + A S W F WS+ S V+T+ SR
Sbjct: 62 YFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSR 111
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 695 QIKEMVE---LPLRHPSLFKAIGVKLHAAFSCMGPPG 796
QI+E+VE LP+ H F+ +G++ GPPG
Sbjct: 173 QIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPG 209
>06_01_0065 +
549972-550770,551577-552190,552392-552544,552769-552885,
552972-553076,553269-553334,553430-553494,553577-553778,
554026-554169,554212-554340
Length = 797
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
Q+ V +PL HP + + +GVK A GPPG
Sbjct: 202 QLMMEVVVPLCHPEVPRWLGVKPVAGLLLHGPPG 235
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 476 LTVRSIVTTPSGPRGHARRRVQSGRNRSITILHRGS 583
+ + +V T GP+G + +GR RS+T+ + G+
Sbjct: 27 MAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 62
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 476 LTVRSIVTTPSGPRGHARRRVQSGRNRSITILHRGS 583
+ + +V T GP+G + +GR RS+T+ + G+
Sbjct: 26 MAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 61
>04_03_0179 -
12304726-12304782,12305509-12305601,12305729-12305833,
12306715-12306793,12307297-12307415,12307728-12307919,
12308158-12308277,12309542-12309613,12310157-12310246,
12310402-12310485
Length = 336
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 695 QIKEMVE---LPLRHPSLFKAIGVKLHAAFSCMGPPG 796
QI+E+VE LP+ H + F+ +G+ GPPG
Sbjct: 122 QIEELVEAVVLPIIHKNCFQRLGIHPPKGVLLYGPPG 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,239,285
Number of Sequences: 37544
Number of extensions: 499333
Number of successful extensions: 1301
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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