Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30682.Seq
(797 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 101 9e-22
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 36 0.050
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 35 0.066
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 33 0.35
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 30 2.5
SB_33412| Best HMM Match : ANF_receptor (HMM E-Value=0) 29 3.3
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 101 bits (241), Expect = 9e-22
Identities = 46/59 (77%), Positives = 56/59 (94%)
Frame = +2
Query: 80 DDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETV 256
D+L+TAIL+ K RPNRL+VEEAV+DDNSVV +SQAKME+LQLFRGDTVL+KGK+RK+TV
Sbjct: 5 DELATAILKNKSRPNRLLVEEAVNDDNSVVTMSQAKMEELQLFRGDTVLIKGKKRKDTV 63
Score = 101 bits (241), Expect = 9e-22
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 656
VRGGMRAVEFKV+ETDPSP+CIVAPDTVIHC+GEP+KREEEEE+LN VG
Sbjct: 108 VRGGMRAVEFKVIETDPSPYCIVAPDTVIHCEGEPVKREEEEESLNEVG 156
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVV 351
L +G+ + CIVLSDD D+KIRM DVV
Sbjct: 53 LIKGKKRKDTVCIVLSDDTISDDKIRMNRVVRMNLRVRLGDVV 95
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 655 GYDDIGGCRKQL 690
GYDDIGGCRKQL
Sbjct: 156 GYDDIGGCRKQL 167
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+V+ P+ HP F G+ GPPG
Sbjct: 321 ELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPG 354
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE++ELP++HP LF+A+G+ GPPG
Sbjct: 188 EIKEVIELPVKHPELFEALGIDQPKGVLLYGPPG 221
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE VELPL HP L++ +G+K G PG
Sbjct: 391 EIKESVELPLTHPELYEEMGIKPPKGVILYGQPG 424
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
++KE VE PL+HP F+ +G++ GPPG
Sbjct: 548 KLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPG 581
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 698 IKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
++EM+E+PL +P LF A GV GP G
Sbjct: 268 VREMIEMPLTNPELFTAYGVPPPRGILLYGPSG 300
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 35.5 bits (78), Expect = 0.050
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E++ELPL +P LF+ +G+ GPPG
Sbjct: 146 ELREVIELPLTNPELFQRVGIAPPKGCLLFGPPG 179
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 35.1 bits (77), Expect = 0.066
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+I+E VELPL H L+K IG+ GPPG
Sbjct: 175 EIREAVELPLTHFELYKQIGIDPPRGVLLYGPPG 208
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+VE PL HP F +G++ GPPG
Sbjct: 95 KLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 128
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 698 IKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++ +E PL HP F +G++ GPPG
Sbjct: 496 LRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPG 528
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 698 IKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+KE+V+ PL +P F +G+ +G PG
Sbjct: 223 LKELVQFPLYYPESFSHLGINGPKGILLVGAPG 255
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 698 IKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++ +E PL HP F +G++ GPPG
Sbjct: 25 LRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPG 57
>SB_33412| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 852
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 710 VELPLRHPSLFKAIGVKLHAAFSCMG 787
V+LP+ HPSL +A+G+ A +SC+G
Sbjct: 547 VKLPVVHPSLGEAMGITF-AVWSCLG 571
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+VE LR+P FK +G KL +G PG
Sbjct: 142 ELQEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPG 174
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+I + ++LPL HP LF A G++ + GPPG
Sbjct: 823 EILDTIQLPLLHPELF-AAGLR-RSGVLLYGPPG 854
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 698 IKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+KE+V+ PL +P F +G+ +G PG
Sbjct: 53 LKELVQFPLYYPESFSHLGINGPKGILLVGAPG 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,233,996
Number of Sequences: 59808
Number of extensions: 555149
Number of successful extensions: 1391
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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