Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30682.Seq
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 128 6e-30
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 116 1e-26
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 42 7e-04
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 42 7e-04
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 37 0.015
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 37 0.015
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 34 0.14
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 33 0.24
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 5.1
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 8.9
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 8.9
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 128 bits (308), Expect = 6e-30
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + + I++SD++CP+EK+RM DVVSI P P++ YG R+H+L
Sbjct: 64 ILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVL 123
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD++EGLTGNLF+V+LKPYF+EAYRP+H+ D F A K + + +
Sbjct: 124 PIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVET--EPAPACI 181
Query: 583 LIP*YTVTVNRLNVRKKRKH*MLS--GYDDIGGCRKQLGAN*GDGGVATASSFTVQGYWS 756
+ P + ++++ + ++ GYDD+GG RKQL + +
Sbjct: 182 VSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGI 241
Query: 757 EAPRGILMYG 786
+ PRGIL++G
Sbjct: 242 KPPRGILLFG 251
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/63 (66%), Positives = 55/63 (87%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 251 TVA 259
+VA
Sbjct: 73 SVA 75
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/49 (67%), Positives = 43/49 (87%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 656
V+ MR VEFKVVET+P+P CIV+PDT+IH +G+PIKREEEEE++N +G
Sbjct: 160 VQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESMNDIG 208
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/40 (65%), Positives = 27/40 (67%)
Frame = +2
Query: 677 VANNWAQIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
V AQIKEMVELPLRHP LFKAIG+K GPPG
Sbjct: 215 VRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPG 254
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+V+ P+ HP + G++ GPPG
Sbjct: 494 ELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPG 527
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 116 bits (280), Expect = 1e-26
Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F A K + + +
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVET--DPAPACI 180
Query: 583 LIP*YTVTVNRLNVRKKRKH*MLS--GYDDIGGCRKQLGAN*GDGGVATASSFTVQGYWS 756
+ P + ++++ + L+ GYDD+GG RKQL + +
Sbjct: 181 VAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGV 240
Query: 757 EAPRGILMYG 786
+ PRGIL++G
Sbjct: 241 KPPRGILLFG 250
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/63 (63%), Positives = 56/63 (88%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 251 TVA 259
TV+
Sbjct: 73 TVS 75
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 656
V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VG
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVG 207
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/40 (67%), Positives = 27/40 (67%)
Frame = +2
Query: 677 VANNWAQIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
V AQIKEMVELPLRHP LFKAIGVK GPPG
Sbjct: 214 VRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPG 253
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+V+ P+ HP + G++ GPPG
Sbjct: 493 ELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPG 526
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 116 bits (280), Expect = 1e-26
Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F A K + + +
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVET--DPAPACI 180
Query: 583 LIP*YTVTVNRLNVRKKRKH*MLS--GYDDIGGCRKQLGAN*GDGGVATASSFTVQGYWS 756
+ P + ++++ + L+ GYDD+GG RKQL + +
Sbjct: 181 VAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGV 240
Query: 757 EAPRGILMYG 786
+ PRGIL++G
Sbjct: 241 KPPRGILLFG 250
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/63 (63%), Positives = 56/63 (88%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 251 TVA 259
TV+
Sbjct: 73 TVS 75
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 656
V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VG
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVG 207
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/40 (67%), Positives = 27/40 (67%)
Frame = +2
Query: 677 VANNWAQIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
V AQIKEMVELPLRHP LFKAIGVK GPPG
Sbjct: 214 VRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPG 253
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+V+ P+ HP + G++ GPPG
Sbjct: 493 ELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPG 526
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE++ELP++HP LF A+G+ GPPG
Sbjct: 170 EIKEVIELPVKHPELFDALGIAQPKGVLLFGPPG 203
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE++ELP++HP LF A+G+ GPPG
Sbjct: 165 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 198
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE++ELP++HP LF A+G+ GPPG
Sbjct: 186 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 219
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 677 VANNWAQIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+A +++E+VELPL +P LFK +G+ GPPG
Sbjct: 147 LAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPG 186
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 677 VANNWAQIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+A +++E+VELPL +P LFK +G+ GPPG
Sbjct: 155 LAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPG 194
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E VELPL H L++ IG+ GPPG
Sbjct: 172 EVREAVELPLTHGELYQQIGIDPPRGVLMYGPPG 205
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+IKE VELPL HP ++ +G++ G PG
Sbjct: 199 EIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPG 232
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
++KE VELPL HP ++ +G+ G PG
Sbjct: 194 ELKESVELPLTHPEYYEEMGITAPKGVILYGEPG 227
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+++E+VE PL HP + +G++ GPPG
Sbjct: 188 KLREVVETPLLHPERYVNLGIEPPKGVLLYGPPG 221
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 695 QIKEMVELPLRHPSLFKAIGVKLHAAFSCMGPPG 796
+I++ V P +HP F+ G+ A GPPG
Sbjct: 470 EIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPG 503
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 85 IIRAFIICHFIQNLLLESKNYYNFY 11
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 50 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 199
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 50 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 199
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,111,570
Number of Sequences: 27780
Number of extensions: 404677
Number of successful extensions: 1029
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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