Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30681.Seq
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 163 8e-40
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 163 8e-40
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 163 8e-40
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 163 8e-40
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 163 8e-40
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 160 6e-39
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 145 2e-34
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 44 4e-04
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 44 4e-04
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 44 4e-04
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 44 4e-04
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 44 6e-04
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 44 6e-04
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 44 6e-04
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 44 6e-04
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 44 6e-04
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 44 6e-04
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 42 0.002
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 42 0.002
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 42 0.002
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 42 0.002
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 40 0.007
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 40 0.007
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 40 0.007
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 40 0.007
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 40 0.007
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 40 0.007
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 40 0.007
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 40 0.007
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 40 0.007
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 40 0.007
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 40 0.007
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 40 0.007
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 40 0.007
BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA doma... 35 0.36
BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein. 35 0.36
AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein. 35 0.36
AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens ... 35 0.36
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 34 0.62
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 34 0.62
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 34 0.62
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 34 0.62
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 34 0.62
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 34 0.62
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 33 1.4
AB065574-1|BAC05807.1| 337|Homo sapiens seven transmembrane hel... 33 1.4
U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein. 32 1.9
D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly facto... 32 1.9
BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis ... 32 1.9
AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis ... 32 1.9
AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly fac... 32 1.9
AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis ... 32 1.9
AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein. 32 1.9
AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein. 32 1.9
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 32 2.5
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 32 2.5
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 32 2.5
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 32 2.5
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 32 2.5
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 32 2.5
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 32 2.5
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 31 4.4
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 31 4.4
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 30 7.7
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 30 7.7
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 163 bits (395), Expect = 8e-40
Identities = 73/79 (92%), Positives = 78/79 (98%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQL
Sbjct: 154 VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 213
Query: 690 AQIKEMVELPLRHPSLFKA 746
AQIKEMVELPLRHP+LFKA
Sbjct: 214 AQIKEMVELPLRHPALFKA 232
Score = 132 bits (318), Expect = 2e-30
Identities = 60/99 (60%), Positives = 70/99 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRG 156
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V ++DIGG +++E+V+ P+ HP F
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 163 bits (395), Expect = 8e-40
Identities = 73/79 (92%), Positives = 78/79 (98%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQL
Sbjct: 154 VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 213
Query: 690 AQIKEMVELPLRHPSLFKA 746
AQIKEMVELPLRHP+LFKA
Sbjct: 214 AQIKEMVELPLRHPALFKA 232
Score = 132 bits (318), Expect = 2e-30
Identities = 60/99 (60%), Positives = 70/99 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRG 156
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V ++DIGG +++E+V+ P+ HP F
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 163 bits (395), Expect = 8e-40
Identities = 73/79 (92%), Positives = 78/79 (98%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQL
Sbjct: 92 VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 151
Query: 690 AQIKEMVELPLRHPSLFKA 746
AQIKEMVELPLRHP+LFKA
Sbjct: 152 AQIKEMVELPLRHPALFKA 170
Score = 131 bits (316), Expect = 3e-30
Identities = 58/88 (65%), Positives = 65/88 (73%)
Frame = +1
Query: 256 CIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTG 435
CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TG
Sbjct: 7 CIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITG 66
Query: 436 NLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
NLFEVYLKPYF+EAYRPI + D F G
Sbjct: 67 NLFEVYLKPYFLEAYRPIRKGDIFLVRG 94
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 163 bits (395), Expect = 8e-40
Identities = 73/79 (92%), Positives = 78/79 (98%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQL
Sbjct: 154 VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 213
Query: 690 AQIKEMVELPLRHPSLFKA 746
AQIKEMVELPLRHP+LFKA
Sbjct: 214 AQIKEMVELPLRHPALFKA 232
Score = 132 bits (318), Expect = 2e-30
Identities = 60/99 (60%), Positives = 70/99 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRG 156
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V ++DIGG +++E+V+ P+ HP F
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 163 bits (395), Expect = 8e-40
Identities = 73/79 (92%), Positives = 78/79 (98%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQL
Sbjct: 154 VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 213
Query: 690 AQIKEMVELPLRHPSLFKA 746
AQIKEMVELPLRHP+LFKA
Sbjct: 214 AQIKEMVELPLRHPALFKA 232
Score = 132 bits (318), Expect = 2e-30
Identities = 60/99 (60%), Positives = 70/99 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRG 156
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V ++DIGG +++E+V+ P+ HP F
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 160 bits (388), Expect = 6e-39
Identities = 72/79 (91%), Positives = 77/79 (97%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMRAVEFKVVET PSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQL
Sbjct: 154 VRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 213
Query: 690 AQIKEMVELPLRHPSLFKA 746
AQIKEMVELPLRHP+LFKA
Sbjct: 214 AQIKEMVELPLRHPALFKA 232
Score = 132 bits (318), Expect = 2e-30
Identities = 60/99 (60%), Positives = 70/99 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAG 519
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRG 156
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V ++DIGG +++E+V+ P+ HP F
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 145 bits (351), Expect = 2e-34
Identities = 64/70 (91%), Positives = 69/70 (98%)
Frame = +3
Query: 537 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEL 716
FKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQIKEMVEL
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVEL 60
Query: 717 PLRHPSLFKA 746
PLRHP+LFKA
Sbjct: 61 PLRHPALFKA 70
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V ++DIGG +++E+V+ P+ HP F
Sbjct: 312 VTWEDIGGLEDVKRELQELVQYPVEHPDKF 341
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 618 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
K +E++ V YD IGG QL I+E++ELPL+ P LFK+
Sbjct: 338 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKS 380
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V + DIGG ++++ VE PL+HP F
Sbjct: 623 VSWSDIGGLESIKLKLEQAVEWPLKHPESF 652
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 618 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
K +E++ V YD IGG QL I+E++ELPL+ P LFK+
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKS 381
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V + DIGG ++++ VE PL+HP F
Sbjct: 624 VSWSDIGGLESIKLKLEQAVEWPLKHPESF 653
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 618 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
K +E++ V YD IGG QL I+E++ELPL+ P LFK+
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKS 381
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V + DIGG ++++ VE PL+HP F
Sbjct: 624 VSWSDIGGLESIKLKLEQAVEWPLKHPESF 653
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 618 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
K +E++ V YD IGG QL I+E++ELPL+ P LFK+
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKS 381
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V + DIGG ++++ VE PL+HP F
Sbjct: 624 VSWSDIGGLESIKLKLEQAVEWPLKHPESF 653
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 44.0 bits (99), Expect = 6e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
Y+ IGG KQ+ +IKE++ELP++HP LF+A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEA 177
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 44.0 bits (99), Expect = 6e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
Y+ IGG KQ+ +IKE++ELP++HP LF+A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEA 177
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 44.0 bits (99), Expect = 6e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
Y+ IGG KQ+ +IKE++ELP++HP LF+A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEA 177
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 44.0 bits (99), Expect = 6e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
Y+ IGG KQ+ +IKE++ELP++HP LF+A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEA 177
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 44.0 bits (99), Expect = 6e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
Y+ IGG KQ+ +IKE++ELP++HP LF+A
Sbjct: 22 YEMIGGLDKQIKEIKEVIELPVKHPELFEA 51
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 44.0 bits (99), Expect = 6e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKA 746
Y+ IGG KQ+ +IKE++ELP++HP LF+A
Sbjct: 144 YEMIGGLDKQIKEIKEVIELPVKHPELFEA 173
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V Y D+GGC++Q+ +++E+VE PL HP F
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERF 201
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V Y D+GGC++Q+ +++E+VE PL HP F
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERF 201
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V Y D+GGC++Q+ +++E+VE PL HP F
Sbjct: 148 VTYSDVGGCKEQIEKLREVVETPLLHPERF 177
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V Y D+GGC++Q+ +++E+VE PL HP F
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERF 201
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP ++
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
+P+ E V Y +IGG +Q+ +++E++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQ 160
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP ++
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
+P+ E V Y +IGG +Q+ +++E++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQ 160
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP ++
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
+P+ E V Y +IGG +Q+ +++E++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQ 160
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP ++
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP ++
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP ++
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
+P+ E V Y +IGG +Q+ +++E++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQ 160
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP ++
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP ++
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYE 212
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
+P+ E V Y +IGG +Q+ +++E++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQ 160
>BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA domain
containing 2 protein.
Length = 1390
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
++V +D +GG +A +KEMV PL +P +F+
Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFE 453
>BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein.
Length = 939
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
++V +D +GG +A +KEMV PL +P +F+
Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFE 453
>AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein.
Length = 1390
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
++V +D +GG +A +KEMV PL +P +F+
Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFE 453
>AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens
cDNA FLJ39814 fis, clone SPLEN2009970, weakly similar to
TAT-BINDING HOMOLOG 7. ).
Length = 978
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
++V +D +GG +A +KEMV PL +P +F+
Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFE 453
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.62
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V Y DIGG Q +++E VELPL H L+K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYK 192
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.62
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V Y DIGG Q +++E VELPL H L+K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYK 192
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.62
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V Y DIGG Q +++E VELPL H L+K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYK 192
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 33.9 bits (74), Expect = 0.62
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V Y DIGG Q +++E VELPL H L+K
Sbjct: 131 VMYADIGGMDIQKQEVREAVELPLTHFELYK 161
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.62
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V Y DIGG Q +++E VELPL H L+K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYK 192
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.62
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V Y DIGG Q +++E VELPL H L+K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYK 192
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
V Y DIGG Q +++E VELP+ H L+K
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPVTHFELYK 192
>AB065574-1|BAC05807.1| 337|Homo sapiens seven transmembrane helix
receptor protein.
Length = 337
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 440 YSKYT*SRTSWRLTVRSIVTTPSGPRGHARRRVQSGRNRSITILHRG 580
Y++ ++ +W L+ R++ PSG R +RR +SG+ RS++ + +G
Sbjct: 24 YTRSCPTQRAWTLSHRALTVQPSGKRSGVQRR-KSGQPRSLSTMAQG 69
>U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein.
Length = 980
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
+V + D+GG ++ +I E ++LPL HP L
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 730
>D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
+V + D+GG ++ +I E ++LPL HP L
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 730
>BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
+V + D+GG ++ +I E ++LPL HP L
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 730
>AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
+V + D+GG ++ +I E ++LPL HP L
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 730
>AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ37502 fis, clone BRAWH2016446, moderately
similar to TAT-BINDING HOMOLOG 7. ).
Length = 574
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
+V +D IGG + +KEMV PL +P +F+
Sbjct: 396 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFE 427
>AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly
factor-2 protein.
Length = 980
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
+V + D+GG ++ +I E ++LPL HP L
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 730
>AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis
factor 6 variant protein.
Length = 836
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
+V + D+GG ++ +I E ++LPL HP L
Sbjct: 718 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 747
>AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein.
Length = 892
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
+V + D+GG ++ +I E ++LPL HP L
Sbjct: 613 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 642
>AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein.
Length = 980
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 648 AVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
+V + D+GG ++ +I E ++LPL HP L
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 730
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
Y DIGG KQ+ ++ E + LP+ H F+
Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFE 178
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
Y DIGG KQ+ ++ E + LP+ H F+
Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFE 178
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
Y DIGG KQ+ ++ E + LP+ H F+
Sbjct: 237 YSDIGGLDKQIQELVEAIVLPMNHKEKFE 265
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
Y DIGG KQ+ ++ E + LP+ H F+
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFE 213
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
Y DIGG KQ+ ++ E + LP+ H F+
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFE 213
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
Y DIGG KQ+ ++ E + LP+ H F+
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFE 213
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFK 743
Y DIGG KQ+ ++ E + LP+ H F+
Sbjct: 170 YSDIGGLDKQIQELVEAIVLPMNHKEKFE 198
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 558 PSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
P P +V P T + GEP + + + +GG + ++E++ LPLR+P
Sbjct: 172 PDPAGLVTPRTRVSLGGEPPSEAQPQPEV------PLGGLSEAADSLRELLRLPLRYPRA 225
Query: 738 FKA 746
A
Sbjct: 226 LTA 228
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 558 PSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
P P +V P T + GEP + + + +GG + ++E++ LPLR+P
Sbjct: 172 PDPAGLVTPRTRVSLGGEPPSEAQPQPEV------PLGGLSEAADSLRELLRLPLRYPRA 225
Query: 738 FKA 746
A
Sbjct: 226 LTA 228
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 558 PSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSL 737
P P +V P T + GEP + + + +GG + ++E++ LPLR+P
Sbjct: 172 PDPAGLVTPRTRVSLGGEPPSEAQPQPEV------PLGGLSEAADSLRELLRLPLRYPRA 225
Query: 738 FKA 746
A
Sbjct: 226 LTA 228
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V ++DIGG +++E+V+ P+ HP F
Sbjct: 143 VTWEDIGGLEDVKRELQELVQYPVEHPDKF 172
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF 740
V ++DIGG +++E+V+ P+ HP F
Sbjct: 102 VTWEDIGGLEDVKRELQELVQYPVEHPDKF 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,405,652
Number of Sequences: 237096
Number of extensions: 2254153
Number of successful extensions: 4973
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 4747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4970
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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