Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30679.Seq
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052117-1|AAK93541.1| 412|Drosophila melanogaster SD06613p pro... 49 8e-06
AE014297-3726|AAN14041.1| 412|Drosophila melanogaster CG11844-P... 49 8e-06
AE014297-3725|AAN14040.1| 412|Drosophila melanogaster CG11844-P... 49 8e-06
AE014297-3724|AAF56404.2| 443|Drosophila melanogaster CG11844-P... 49 8e-06
AY119578-1|AAM50232.1| 490|Drosophila melanogaster LD07162p pro... 45 1e-04
AE014134-2563|AAN10889.1| 490|Drosophila melanogaster CG4170-PD... 45 1e-04
AE014134-2562|AAN10888.1| 490|Drosophila melanogaster CG4170-PC... 45 1e-04
AE014134-2561|AAN10887.1| 490|Drosophila melanogaster CG4170-PB... 45 1e-04
AE014134-2560|AAF53437.1| 490|Drosophila melanogaster CG4170-PA... 45 1e-04
AY118699-1|AAM50559.1| 309|Drosophila melanogaster AT19571p pro... 36 0.059
AE014298-2117|AAF48435.2| 309|Drosophila melanogaster CG15031-P... 36 0.059
>AY052117-1|AAK93541.1| 412|Drosophila melanogaster SD06613p
protein.
Length = 412
Score = 48.8 bits (111), Expect = 8e-06
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +2
Query: 617 RDRAGP---RSFDNRGKRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
RD GP R+ + GKR+FDR+SGSD+TGV DK EG G G
Sbjct: 129 RDNRGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAHNWG 174
>AE014297-3726|AAN14041.1| 412|Drosophila melanogaster CG11844-PC,
isoform C protein.
Length = 412
Score = 48.8 bits (111), Expect = 8e-06
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +2
Query: 617 RDRAGP---RSFDNRGKRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
RD GP R+ + GKR+FDR+SGSD+TGV DK EG G G
Sbjct: 129 RDNRGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAHNWG 174
>AE014297-3725|AAN14040.1| 412|Drosophila melanogaster CG11844-PA,
isoform A protein.
Length = 412
Score = 48.8 bits (111), Expect = 8e-06
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +2
Query: 617 RDRAGP---RSFDNRGKRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
RD GP R+ + GKR+FDR+SGSD+TGV DK EG G G
Sbjct: 129 RDNRGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAHNWG 174
>AE014297-3724|AAF56404.2| 443|Drosophila melanogaster CG11844-PB,
isoform B protein.
Length = 443
Score = 48.8 bits (111), Expect = 8e-06
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +2
Query: 617 RDRAGP---RSFDNRGKRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
RD GP R+ + GKR+FDR+SGSD+TGV DK EG G G
Sbjct: 160 RDNRGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAHNWG 205
>AY119578-1|AAM50232.1| 490|Drosophila melanogaster LD07162p
protein.
Length = 490
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 635 RSFDNRG-KRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
R++D + KR+FDR+SGSD+TGV DK +GAG G
Sbjct: 210 RNYDGQNRKREFDRQSGSDRTGVKSIDKRDGAGSHNWG 247
>AE014134-2563|AAN10889.1| 490|Drosophila melanogaster CG4170-PD,
isoform D protein.
Length = 490
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 635 RSFDNRG-KRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
R++D + KR+FDR+SGSD+TGV DK +GAG G
Sbjct: 210 RNYDGQNRKREFDRQSGSDRTGVKSIDKRDGAGSHNWG 247
>AE014134-2562|AAN10888.1| 490|Drosophila melanogaster CG4170-PC,
isoform C protein.
Length = 490
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 635 RSFDNRG-KRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
R++D + KR+FDR+SGSD+TGV DK +GAG G
Sbjct: 210 RNYDGQNRKREFDRQSGSDRTGVKSIDKRDGAGSHNWG 247
>AE014134-2561|AAN10887.1| 490|Drosophila melanogaster CG4170-PB,
isoform B protein.
Length = 490
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 635 RSFDNRG-KRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
R++D + KR+FDR+SGSD+TGV DK +GAG G
Sbjct: 210 RNYDGQNRKREFDRQSGSDRTGVKSIDKRDGAGSHNWG 247
>AE014134-2560|AAF53437.1| 490|Drosophila melanogaster CG4170-PA,
isoform A protein.
Length = 490
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 635 RSFDNRG-KRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
R++D + KR+FDR+SGSD+TGV DK +GAG G
Sbjct: 210 RNYDGQNRKREFDRQSGSDRTGVKSIDKRDGAGSHNWG 247
>AY118699-1|AAM50559.1| 309|Drosophila melanogaster AT19571p
protein.
Length = 309
Score = 35.9 bits (79), Expect = 0.059
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 653 GKRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
G R FDRRSGS +TGV +K GAG G
Sbjct: 96 GDRLFDRRSGSKRTGVKAVEKRNGAGAHNWG 126
>AE014298-2117|AAF48435.2| 309|Drosophila melanogaster CG15031-PA
protein.
Length = 309
Score = 35.9 bits (79), Expect = 0.059
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 653 GKRDFDRRSGSDKTGVNQFDKXEGAGPPQLG 745
G R FDRRSGS +TGV +K GAG G
Sbjct: 96 GDRLFDRRSGSKRTGVKAVEKRNGAGAHNWG 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,587,374
Number of Sequences: 53049
Number of extensions: 468049
Number of successful extensions: 907
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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