Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30672.Seq
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical... 90 2e-18
AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical ... 90 2e-18
AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical... 85 7e-17
AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical... 85 7e-17
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 34 0.093
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 34 0.093
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 34 0.093
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.87
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 31 0.87
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 1.5
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 3.5
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 29 4.6
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 29 4.6
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 29 4.6
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 28 6.1
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 28 6.1
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 6.1
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z92790-3|CAB07228.1| 383|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 28 8.1
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 28 8.1
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 8.1
U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical p... 28 8.1
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 8.1
AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical ... 28 8.1
>AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical
protein Y62E10A.13b protein.
Length = 279
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/82 (51%), Positives = 56/82 (68%)
Frame = +1
Query: 259 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDII 438
++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL RL ++
Sbjct: 52 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAARLQVM 111
Query: 439 RPNVGQIREFIEKFPVRLTPGI 504
+PN Q+ +F+ +LT GI
Sbjct: 112 KPNHEQLEQFVNISKPKLTVGI 133
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +3
Query: 510 LVKELHERGVIVYLVSGGFRSLIEPVAERL 599
LV LH RG VYLVSGGFR LI PVAE L
Sbjct: 136 LVSRLHARGTHVYLVSGGFRRLILPVAELL 165
>AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical
protein Y62E10A.13a protein.
Length = 276
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/82 (51%), Positives = 56/82 (68%)
Frame = +1
Query: 259 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDII 438
++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL RL ++
Sbjct: 49 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAARLQVM 108
Query: 439 RPNVGQIREFIEKFPVRLTPGI 504
+PN Q+ +F+ +LT GI
Sbjct: 109 KPNHEQLEQFVNISKPKLTVGI 130
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +3
Query: 510 LVKELHERGVIVYLVSGGFRSLIEPVAERL 599
LV LH RG VYLVSGGFR LI PVAE L
Sbjct: 133 LVSRLHARGTHVYLVSGGFRRLILPVAELL 162
>AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical
protein Y62E10A.13d protein.
Length = 282
Score = 84.6 bits (200), Expect = 7e-17
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +1
Query: 259 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTF--QEALKKRLD 432
++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F ++AL RL
Sbjct: 53 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALAARLQ 112
Query: 433 IIRPNVGQIREFIEKFPVRLTPGI 504
+++PN Q+ +F+ +LT GI
Sbjct: 113 VMKPNHEQLEQFVNISKPKLTVGI 136
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +3
Query: 510 LVKELHERGVIVYLVSGGFRSLIEPVAERL 599
LV LH RG VYLVSGGFR LI PVAE L
Sbjct: 139 LVSRLHARGTHVYLVSGGFRRLILPVAELL 168
>AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical
protein Y62E10A.13c protein.
Length = 265
Score = 84.6 bits (200), Expect = 7e-17
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +1
Query: 259 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTF--QEALKKRLD 432
++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F ++AL RL
Sbjct: 36 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALAARLQ 95
Query: 433 IIRPNVGQIREFIEKFPVRLTPGI 504
+++PN Q+ +F+ +LT GI
Sbjct: 96 VMKPNHEQLEQFVNISKPKLTVGI 119
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +3
Query: 510 LVKELHERGVIVYLVSGGFRSLIEPVAERL 599
LV LH RG VYLVSGGFR LI PVAE L
Sbjct: 122 LVSRLHARGTHVYLVSGGFRRLILPVAELL 151
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -3
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 482 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 541
Query: 215 VRASSTSRTAGCFSNCKEPS 156
+ + S S + G P+
Sbjct: 542 MTSPSQSSSVGSSQGSTSPA 561
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = -3
Query: 389 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVR 210
P S+ S +T P+ +SS S + S + + S SG S+G S S+P
Sbjct: 424 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 479
Query: 209 ASSTSRTAGCFSNCKEPS 156
+S + T+G + EPS
Sbjct: 480 SSLSPSTSGMSTLTSEPS 497
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 392 PPIASAVSLLTSS-PFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
P + S+ ++ +SS FP ++ASS PS TV STS S+ G+T TP
Sbjct: 64 PVVLSSSTIQSSSGTFPSSVASS--PS---TVGSTSGAASSSSYATVSTIAGSTGSTITP 118
Query: 215 VRASSTS 195
V SS++
Sbjct: 119 VPGSSST 125
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -3
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 748
Query: 215 VRASSTSRTAGCFSNCKEPS 156
+ + S S + G P+
Sbjct: 749 MTSPSQSSSVGSSQGSTSPA 768
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = -3
Query: 389 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVR 210
P S+ S +T P+ +SS S + S + + S SG S+G S S+P
Sbjct: 631 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
Query: 209 ASSTSRTAGCFSNCKEPS 156
+S + T+G + EPS
Sbjct: 687 SSLSPSTSGMSTLTSEPS 704
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 392 PPIASAVSLLTSS-PFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
P + S+ ++ +SS FP ++ASS PS TV STS S+ G+T TP
Sbjct: 271 PVVLSSSTIQSSSGTFPSSVASS--PS---TVGSTSGAASSSSYATVSTIAGSTGSTITP 325
Query: 215 VRASSTS 195
V SS++
Sbjct: 326 VPGSSST 332
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -3
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 748
Query: 215 VRASSTSRTAGCFSNCKEPS 156
+ + S S + G P+
Sbjct: 749 MTSPSQSSSVGSSQGSTSPA 768
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = -3
Query: 380 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASS 201
S V+ T+SP ASS+ PSS T+ STS T + ++ S + A+S+ + V S
Sbjct: 1500 STVASSTASP----AASSTAPSSTGTMSSTSSGTVGSTISESSTTASASSQTGSTVTMGS 1555
Query: 200 TSRTAG 183
+S T+G
Sbjct: 1556 SS-TSG 1560
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = -3
Query: 383 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRAS 204
+SA S + SS ASS+ PSS T+ STS T + ++ S + TS + V
Sbjct: 1745 SSAGSTVVSST-ASPAASSTAPSSTGTMSSTSSGTVGSTMSQSSTAASTTSHTGSTVTLG 1803
Query: 203 STSRTAGCFSNCKEPS 156
S+S ++ S + S
Sbjct: 1804 SSSTSSNQMSTSQGSS 1819
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = -3
Query: 380 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASS 201
S+V +S +++S++PSS T+ STS T + ++ S + A+S+ + V S
Sbjct: 1818 SSVGSTVASSTAGLVSTSTVPSSTGTMGSTSSGTVGSTISESSTTASASSQTGSTVTMGS 1877
Query: 200 TSRTAG 183
+S T+G
Sbjct: 1878 SS-TSG 1882
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = -3
Query: 338 LASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRT 189
+++S++PSS T+ STS T + ++ S + +S+ + V STS T
Sbjct: 1915 VSTSTVPSSTGTMGSTSSGTVGSTISESSTAASTSSQTGSTVTIGSTSGT 1964
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = -3
Query: 389 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVR 210
P S+ S +T P+ +SS S + S + + S SG S+G S S+P
Sbjct: 631 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
Query: 209 ASSTSRTAGCFSNCKEPS 156
+S + T+G + EPS
Sbjct: 687 SSLSPSTSGMSTLTSEPS 704
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = -3
Query: 338 LASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRTAG 183
+++S++PSS T+ STS T + ++ S + A+S+ + V S+S T+G
Sbjct: 1593 VSTSTVPSSTGTMGSTSSGTVGSTISESSTTASASSQTGSTVTMGSSS-TSG 1643
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = -3
Query: 338 LASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRTAG 183
+++S++PSS T+ STS T + ++ S + A+S+ + V S+S T+G
Sbjct: 1676 VSTSTVPSSTGTMGSTSSGTVGSTISESSTAASASSQTGSTVTMGSSS-TSG 1726
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 392 PPIASAVSLLTSS-PFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
P + S+ ++ +SS FP ++ASS PS TV STS S+ G+T TP
Sbjct: 271 PVVLSSSTIQSSSGTFPSSVASS--PS---TVGSTSGAASSSSYATVSTIAGSTGSTITP 325
Query: 215 VRASSTS 195
V SS++
Sbjct: 326 VPGSSST 332
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -3
Query: 362 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTS 195
++SP S++ PS+ T S+S T S+ ++S S ++++ ST + SST+
Sbjct: 482 STSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -3
Query: 380 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASS 201
+ V TS+ S+S PS+ T+ESTS T ++ + S S T + S+ + +S
Sbjct: 294 TTVPTSTSTVTTAMSTSTSTPSTSTTIESTS-TTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 200 TSRT 189
+S T
Sbjct: 353 SSTT 356
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = -3
Query: 500 PGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSM 321
P +LT + + S P+ + +S S + + + S+ S T+ P + S+S
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTS----PSTSPVTSTVTSSSSSSTTVTTPTSTESTST 483
Query: 320 -PSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASST 198
PSS +T +T+ T + ++S + +T+ S ASST
Sbjct: 484 SPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASST 525
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Frame = -3
Query: 413 ASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMT----VESTSKQTQSAVLNN---- 258
AS + P ++ + ++SP + SSS S+ +T ESTS S V +
Sbjct: 437 ASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAP 496
Query: 257 SGQSVGATSR*STPVRASSTS 195
S + G +S STP +S+S
Sbjct: 497 STSTTGPSSSSSTPSSTASSS 517
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -3
Query: 362 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTS 195
++SP S++ PS+ T S+S T S+ ++S S ++++ ST + SST+
Sbjct: 482 STSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -3
Query: 380 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASS 201
+ V TS+ S+S PS+ T+ESTS T ++ + S S T + S+ + +S
Sbjct: 294 TTVPTSTSTVTTAMSTSTSTPSTSTTIESTS-TTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 200 TSRT 189
+S T
Sbjct: 353 SSTT 356
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = -3
Query: 500 PGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSM 321
P +LT + + S P+ + +S S + + + S+ S T+ P + S+S
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTS----PSTSPVTSTVTSSSSSSTTVTTPTSTESTST 483
Query: 320 -PSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASST 198
PSS +T +T+ T + ++S + +T+ S ASST
Sbjct: 484 SPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASST 525
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Frame = -3
Query: 413 ASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMT----VESTSKQTQSAVLNN---- 258
AS + P ++ + ++SP + SSS S+ +T ESTS S V +
Sbjct: 437 ASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAP 496
Query: 257 SGQSVGATSR*STPVRASSTS 195
S + G +S STP +S+S
Sbjct: 497 STSTTGPSSSSSTPSSTASSS 517
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = -3
Query: 389 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVR 210
P + AVS T++P P N + ++P + + + V +S + GA S +T
Sbjct: 2228 PTSGAVSSTTNTPSPTNQSPVTLPPPSVATAGPTGPILTVVPVSSAPTSGAVSSTATAAP 2287
Query: 209 ASSTSRTAGCFS 174
+T++T+ S
Sbjct: 2288 VITTTKTSSVLS 2299
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTS-KQTQSAVLNNSGQSVGATSR*ST 219
+PP S S T P S+ P+S T +T+ K T S + S + TS +T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 218 PVRASSTSRTA 186
+T+ T+
Sbjct: 643 TTPQPTTTTTS 653
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTS-KQTQSAVLNNSGQSVGATSR*ST 219
+PP S S T P S+ P+S T +T+ K T S + S + TS +T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 218 PVRASSTSRTA 186
+T+ T+
Sbjct: 643 TTPQPTTTTTS 653
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = -3
Query: 386 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRA 207
+AS+ TSS ++ASSS PS TV + S T + S + G T + +
Sbjct: 489 VASSTIAPTSSQESSSIASSSAPSQSTTVITVS-TTATVSSGQSTSTFGTTIGQGSSFGS 547
Query: 206 SSTSRTAGCFSNCKEPS 156
S+ T G S PS
Sbjct: 548 STIQTTQGTSSFAPIPS 564
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = -1
Query: 151 CFFSE*RNYYDRIHFNLIY*LRYYLSFVKVTSVIMKDPLCGKYDE 17
C+++E NY++ N + Y+ SF + + I+++ L GK+++
Sbjct: 1502 CYWNEGMNYWETDCGNFYGAIIYFCSFYLIITYIVRNLLVGKFEK 1546
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 401 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*S 222
V +PPIA S +P P++ S S + ST + + + S Q SR S
Sbjct: 10 VNIPPIAKTRSTSHLAPTPEHHRSVSYEDTTTASTSTDSVPEVRIRSESSQ----VSRES 65
Query: 221 TPVRAS 204
P+RAS
Sbjct: 66 PPIRAS 71
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 401 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*S 222
V +PPIA S +P P++ S S + ST + + + S Q SR S
Sbjct: 10 VNIPPIAKTRSTSHLAPTPEHHRSVSYEDTTTASTSTDSVPEVRIRSESSQ----VSRES 65
Query: 221 TPVRAS 204
P+RAS
Sbjct: 66 PPIRAS 71
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 353 PFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRT 189
P + + S ++ + EST TQS S S G T+ T R S S+T
Sbjct: 522 PHRDDSTTDSKTTTSLDYESTPTSTQSTASTKSSTSEGITTSEQTSHRMFSASKT 576
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 355 DEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 447
D+VK +T E M GNM + RLD+ P+
Sbjct: 385 DDVKMITGEEMKGNMADFSDILTRLDLAPPS 415
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = -3
Query: 320 PSSCMTVESTSKQTQSAVLNNSGQSVGATSR---*STPVRASSTSRTAGCFS 174
PS+ + STS+ T SA L ++ +++ +TS+ ST R +S T+G S
Sbjct: 913 PSTPLETASTSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATS 964
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 392 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLN--NSGQSV 243
P + S TS+P +AS+ PS+ +V STS Q +A + NSG+ +
Sbjct: 2859 PTTSKQASASTSTPSTSAVASAQTPST--SVPSTSSQAAAAAASSANSGEDI 2908
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 359 SSPFPQNLASSS-MPSSCMTVESTSKQTQSAVLNNS 255
SSP L++SS +PS T +S Q QS V NNS
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNS 866
>Z92790-3|CAB07228.1| 383|Caenorhabditis elegans Hypothetical
protein H03G16.4 protein.
Length = 383
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 151 NRDGSLQFEKQPAVRDVEDALTGVDQRDVAPTDCPELFRTA--DCVCFDVDSTVIQDEGI 324
NRDGS + R E +TG D ++A D + + + D V ++D Q+
Sbjct: 141 NRDGSCYVQCDTGARGDEKEVTGGDHLEMAVNDFCNMIKGSKHDLVKVELD---FQNCSP 197
Query: 325 DELAKFC 345
DE KFC
Sbjct: 198 DEHDKFC 204
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 359 SSPFPQNLASSS-MPSSCMTVESTSKQTQSAVLNNS 255
SSP L++SS +PS T +S Q QS V NNS
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNS 866
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 362 TSSPFPQNLA-SSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRTA 186
T +P P + + S+S +S T STS ++ + + +S T+ STP +S + T+
Sbjct: 87 TDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTTTATSTPTSSSKATTTS 146
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 292 VDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIRE 465
+D+ + E L K KG+E+ R AEA G ++ +KKR++ + + GQIR+
Sbjct: 1766 IDTELASHEPQVSLVKL--KGEELLRSAAEAGVG----EDQIKKRMEDLEQSWGQIRD 1817
>U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical
protein F25B5.2 protein.
Length = 757
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -3
Query: 437 MMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNN 258
M+ +L + S+ + PP +V+ + L +S +++ES ++
Sbjct: 107 MLRTLVNRDSFTPVPPPDGESVTFILPEIGSSKLEFTSKMDDAISIESRMSIGSCHTIDE 166
Query: 257 SGQSVGATSR*STPVR 210
S+G+TS TP R
Sbjct: 167 DSASIGSTSVFCTPSR 182
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -3
Query: 410 SWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATS 231
SW PPI + VSL T + S+ MTV S S + + + + QS AT
Sbjct: 4341 SWTTAKPPIGAKVSLQTKK------VEKEVTSATMTVASASVECEVGLESKREQSRDAT- 4393
Query: 230 R*STPVRASS 201
+ VRA S
Sbjct: 4394 --GSMVRAKS 4401
>AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical
protein ZK185.5 protein.
Length = 352
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 86 PQSVNKIEVNSIIIVSLL-GEEATEMALYSLKSNLQYATLKTLSLVSISVM 235
P+ N++E+ +II S+L G T + + S++S L+ +++ +IS+M
Sbjct: 134 PRGRNRLELVGVIICSILMGISNTLLVMESIRSILEGDINPVMNITTISIM 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,402,944
Number of Sequences: 27780
Number of extensions: 328994
Number of successful extensions: 1186
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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