Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30671.Seq
(298 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 140 4e-33
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 136 1e-31
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 129 1e-29
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 124 5e-28
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 116 1e-25
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 108 3e-23
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 105 1e-22
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 97 9e-20
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 95 3e-19
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 86 1e-16
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 83 2e-15
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 79 1e-14
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 78 3e-14
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 68 5e-11
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 56 1e-07
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 41 0.006
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 41 0.006
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 39 0.019
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 39 0.025
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 38 0.044
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 36 0.14
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 36 0.14
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 35 0.31
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 35 0.41
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 34 0.55
UniRef50_Q1EY35 Cluster: Major facilitator superfamily MFS_1 pre... 33 1.3
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 33 1.3
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 33 1.3
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 32 2.2
UniRef50_P19503 Cluster: Envelope glycoprotein gp160 precursor (... 32 2.2
UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4; P... 32 2.9
UniRef50_Q4V2R7 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_Q5AY71 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 31 3.9
UniRef50_O87614 Cluster: Transposase; n=4; Proteobacteria|Rep: T... 31 3.9
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q29471 Cluster: Annexin A13; n=24; Euteleostomi|Rep: An... 31 5.1
UniRef50_Q2IUU2 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 31 6.7
UniRef50_UPI0000E46956 Cluster: PREDICTED: similar to myostatin ... 30 8.9
UniRef50_Q399U9 Cluster: Rhs family protein; n=2; Burkholderia c... 30 8.9
UniRef50_Q6QT50 Cluster: FucA; n=14; Streptococcus|Rep: FucA - S... 30 8.9
UniRef50_Q0BZ87 Cluster: YD repeat/RHS repeat protein; n=1; Hyph... 30 8.9
UniRef50_A5N0X0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A2XSM9 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|... 30 8.9
UniRef50_Q7RXT7 Cluster: Putative uncharacterized protein NCU004... 30 8.9
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 30 8.9
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 140 bits (340), Expect = 4e-33
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKR+G VEAD LGDEWKGY LR+A GNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLL 251
FPMK GVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 136 bits (328), Expect = 1e-31
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MKLNVS+PATG QK FEV+D+HKLR FY+KR+GAE+ AD LGDEWKGYV ++A GNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQR 260
FPMK GVLTN+RVRLL+++
Sbjct: 61 FPMKQGVLTNTRVRLLLKK 79
Score = 34.7 bits (76), Expect = 0.41
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2
Query: 257 KGHSCYRPRRDGER 298
KGHSCYRPRR GER
Sbjct: 79 KGHSCYRPRRTGER 92
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 129 bits (311), Expect = 1e-29
Identities = 57/79 (72%), Positives = 67/79 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKR+ EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQR 260
FPMK GVLT+ RVRLL+ +
Sbjct: 61 FPMKQGVLTHGRVRLLLSK 79
Score = 35.1 bits (77), Expect = 0.31
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 254 AKGHSCYRPRRDGER 298
+KGHSCYRPRR GER
Sbjct: 78 SKGHSCYRPRRTGER 92
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 124 bits (298), Expect = 5e-28
Identities = 52/79 (65%), Positives = 63/79 (79%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MKLN+SYP TGCQKL E+ DE K+R FY+KR+ EV + LGDEWKGYV R+ GNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQR 260
FPMK G++TN RVRLL+ +
Sbjct: 61 FPMKQGIMTNGRVRLLLSK 79
Score = 35.1 bits (77), Expect = 0.31
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 254 AKGHSCYRPRRDGER 298
+KGHSCYRPRR GER
Sbjct: 78 SKGHSCYRPRRTGER 92
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 116 bits (279), Expect = 1e-25
Identities = 50/78 (64%), Positives = 63/78 (80%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MKLN+S+PATGCQKL E DE K R FYEK + +EV AD LG+EWKGY++R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQ 257
FPMK VLT+ R+ LL++
Sbjct: 61 FPMKQDVLTHDRIHLLLR 78
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 108 bits (259), Expect = 3e-23
Identities = 47/79 (59%), Positives = 61/79 (77%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MK N+SYP TG QK E+ D+ K IF++KR+G VEAD LG+E+KGYVL++ GNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQR 260
FPM+ GVL RVR+LM++
Sbjct: 61 FPMRQGVLFKGRVRILMRK 79
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 105 bits (253), Expect = 1e-22
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MK N+SYP TG QK E+ D+ K IF +K++G EVE D LGDE+KGYV ++A GNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 204 FPMKHGVLTNSRVRLLM 254
FPMK GV+ RVRLL+
Sbjct: 61 FPMKQGVMVRGRVRLLL 77
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 96.7 bits (230), Expect = 9e-20
Identities = 46/79 (58%), Positives = 55/79 (69%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MKLN+S P QK E+ DE KL F EKRIG V D +G+E+ GYV R+ GNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 204 FPMKHGVLTNSRVRLLMQR 260
FPM GVLTN+RVRLL ++
Sbjct: 102 FPMMQGVLTNNRVRLLFKK 120
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 95.1 bits (226), Expect = 3e-19
Identities = 44/76 (57%), Positives = 56/76 (73%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQGF 206
K+NV+YPATG K F+ +E R F +KRIG EV+A LGDE+KGY+L++ G DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 207 PMKHGVLTNSRVRLLM 254
PM GV TN+RVRLL+
Sbjct: 61 PMMTGVATNNRVRLLL 76
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 86.2 bits (204), Expect = 1e-16
Identities = 35/78 (44%), Positives = 55/78 (70%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ G DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQ 257
FPMK GV+T R+RLL++
Sbjct: 61 FPMKQGVITPRRIRLLLK 78
Score = 30.3 bits (65), Expect = 8.9
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2
Query: 260 GHSCYRPRRDGER 298
G SCYRPR+DGER
Sbjct: 80 GASCYRPRKDGER 92
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 82.6 bits (195), Expect = 2e-15
Identities = 34/81 (41%), Positives = 55/81 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + G DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQRAT 266
FPMK G+L+ SRV++L+++ +
Sbjct: 61 FPMKEGILSPSRVKILLKKGS 81
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 79.4 bits (187), Expect = 1e-14
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQ 200
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ G+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 201 GFPMKHGVLTNSRVRLLMQR 260
GFPM GVL +SRV LL++R
Sbjct: 61 GFPMVPGVLASSRVSLLVKR 80
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 78.2 bits (184), Expect = 3e-14
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWK 161
MKLN+S+PATGCQKL EV DE KLR FYEKR+ EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQGF 206
K+N+S P TG K + D K + + R+ +E + LG+E+ G R+ GND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 207 PMKHGVLTNSRVRLLMQR 260
PM GVL + R RLL+++
Sbjct: 68 PMYQGVLKSQRARLLLRQ 85
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/65 (38%), Positives = 44/65 (67%)
Frame = +3
Query: 66 LFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQGFPMKHGVLTNSRVR 245
+FE+ +++R+ Y+K+IG + + LG+E++G ++ + G+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 246 LLMQR 260
L+ +
Sbjct: 60 PLLSK 64
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 40.7 bits (91), Expect = 0.006
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQG 203
MK+N++ P G Q + DE I K IG +E LG+++ + G+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 204 FPMKHGVLTNSRVRLLMQRAT 266
F +K + T R+++ +++ +
Sbjct: 60 FLLKKNLNTFERLKINVKKGS 80
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 40.7 bits (91), Expect = 0.006
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLG---DEWKGYV------ 170
A KL +S P G K E+ ++ +RIG E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 171 LRVACGNDKQGFPMKHGVLTNSRVRLLMQRATHVTDRAAMER 296
L++ G DK GFPM+ V RV++L+ R R ER
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPGFRPRERGER 102
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 39.1 bits (87), Expect = 0.019
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +3
Query: 114 RIGAEVEADQLGDEWKGYVLRVACGNDKQGFPMKHGVLTNSRVRLLMQRAT 266
+IG E LG KGY LR+ G+DK GFPMK V R + L+ T
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 38.7 bits (86), Expect = 0.025
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQL--------GDEWKGYV- 170
A KL +S P +G K E+ ++ KRIG ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 171 LRVACGNDKQGFPMKHGVLTNSRVRLLMQRATHVTDRAAMER 296
L + G DK GFPM+ + RVR+L+ + + ER
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPGFRPKEKGER 102
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 37.9 bits (84), Expect = 0.044
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 KLFEV-VDEHKLRIFYEKRIGAEVEADQLGDEW-KGYVLRVACGNDKQGFPMKHGVLTNS 236
K F++ ++ R F KRIG V A LG E KG L + G+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 237 RVRLLM 254
+ R L+
Sbjct: 193 KKRALL 198
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 254 HQKTNTAVCQDAMFHRESLLVVAASDTKYIALPFI 150
H++ +T V Q A+ H E+LLVV D + ++LPF+
Sbjct: 177 HEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 36.3 bits (80), Expect = 0.14
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDK 197
+V+K+ VS P +G E + L Y K+IG ++ ++G + GY L++ G+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 198 QGFPMKHGV 224
GFPM+ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 35.1 bits (77), Expect = 0.31
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +3
Query: 111 KRIGAEVEADQLGDEWKGYVLRVACGNDKQGFPMKHGVLTNSRVRLLMQ 257
K+IG E+ + E +GY L++ G+D+ GF M+H + ++R+L++
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLK 74
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDK 197
A ++ V+ P +G FEV D F + IGA V+ +G + GY + + G+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 198 QGFPMKHGVLTNSRVRLLMQ 257
G PM+ V + + +L++
Sbjct: 59 AGRPMREDVDGSDLMEVLLE 78
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 34.3 bits (75), Expect = 0.55
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 117 IGAEVEADQLGDEWKGYVLRVACGNDKQGFPMKHGVLTNSRVRLLMQRATHVTD 278
IG+E +A LG E K +R+ G+DK G PM+ V +R +L+ R + D
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRD 89
>UniRef50_Q1EY35 Cluster: Major facilitator superfamily MFS_1
precursor; n=1; Clostridium oremlandii OhILAs|Rep: Major
facilitator superfamily MFS_1 precursor - Clostridium
oremlandii OhILAs
Length = 421
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -3
Query: 260 PLHQKTNTAVCQDAMFHRESLLVVAASDTKYIALPFIA*LISLYFGANALFVKDTKLVLV 81
P ++ T T + + + + S LV A +KY+ PFIA LI A+ + D +++
Sbjct: 114 PAYRATVTDIISEENYAKASGLVQIAGTSKYLISPFIAGLILTVSDIRAILIFDIATIII 173
Query: 80 HHF 72
F
Sbjct: 174 TAF 176
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 75 VVDEHKLRIFYEKRIGAEVEADQLGDEW 158
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 33.1 bits (72), Expect = 1.3
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 36 VSYPATG--CQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQGFP 209
+S P TG QK+ E + ++L K+IG +V + + D Y L++ G D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFP 62
Query: 210 MKHGVLTNSRVRLLM 254
M+ + +R RLL+
Sbjct: 63 MRPDLPGTARRRLLL 77
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQL 146
M + ++YPA+ QKL ++ +H++ Y+ E+ AD L
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_P19503 Cluster: Envelope glycoprotein gp160 precursor (Env
polyprotein) [Contains: Surface protein (SU)
(Glycoprotein 120) (gp120); Transmembrane protein (TM)
(Glycoprotein 32) (gp32)]; n=4192; Primate lentivirus
group|Rep: Envelope glycoprotein gp160 precursor (Env
polyprotein) [Contains: Surface protein (SU)
(Glycoprotein 120) (gp120); Transmembrane protein (TM)
(Glycoprotein 32) (gp32)] - Simian immunodeficiency
virus (isolate PBj14/BCL-3) (SIV-sm)
(Simianimmunodeficiency virus sooty mangabey monkey)
Length = 889
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/98 (21%), Positives = 40/98 (40%)
Frame = +2
Query: 2 FDGIDRSHEVKRFVPGNGMPEVVRSGGRAQASYLLRKAHWXXXXXXXXXXXMEGLCTSCR 181
+ G +++ ++K PG G PEV + +L K +W + +
Sbjct: 373 YTGTNKTEQIKLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVENIQNGSRWTSQNQK 432
Query: 182 LRQRQARIPDETWRPDKQPCSSSDAKGHSCYRPRRDGE 295
RQR+ +P +Q ++ G + Y P R+G+
Sbjct: 433 ERQRRNYVPCHI----RQIINTWHKVGKNVYLPPREGD 466
>UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4;
Proteobacteria|Rep: Selenium-binding family protein -
Methylococcus capsulatus
Length = 459
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 54 GCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKG----YVLRVACGNDKQG 203
G +LF++ D H R YEK IGA+V + + W G Y + DK+G
Sbjct: 348 GKTRLFDISDPHHPRQVYEKTIGAQV--NMVSSSWDGQRLYYTSSLLANWDKKG 399
>UniRef50_Q4V2R7 Cluster: Putative uncharacterized protein; n=1;
Burkholderia mallei|Rep: Putative uncharacterized
protein - Burkholderia mallei (Pseudomonas mallei)
Length = 121
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 177 HEVHSPSIHRLTDQPLLRRQCAFRKRYEACARP 79
H PSIHR TD P+ R Q A R Y P
Sbjct: 59 HRSIDPSIHRSTDPPIHRAQAAQRAAYTGAPAP 91
>UniRef50_Q5AY71 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 465
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 219 HVSSGILACRCRKRHEVHSPSIHRLTDQPLLRRQCAFRKRYEACARPPLRTTSG 58
H S +L C +HE SP+ + PL++ Q R+ ++A ARP TSG
Sbjct: 244 HYSELLLRCTRMLQHEQESPTDELI--YPLIKLQQLARETFDAQARPRSMLTSG 295
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 31.5 bits (68), Expect = 3.9
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +3
Query: 27 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQGF 206
KLN+S+ Q L EV + KLR FYEK + E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 207 PMKHGVLTNSRVRLLM 254
MK VL + RV LL+
Sbjct: 51 SMKQEVLIHFRVHLLL 66
>UniRef50_O87614 Cluster: Transposase; n=4; Proteobacteria|Rep:
Transposase - Pseudomonas aeruginosa
Length = 388
Score = 31.5 bits (68), Expect = 3.9
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = -2
Query: 264 WPFASEDEHGCLSGRHVSSGILACRCRKRHEVHSPSIH-RLTDQPLLRRQCAFRKRYEAC 88
WP GC S+ ACR R + +I R+T + +L +C+ R
Sbjct: 67 WPKGCRTRCGCSVAHRASTAATACRRRSAISNATATISPRVTKRSVLTTECSLR---ATT 123
Query: 87 ARPPLRTTSGIPLPGTKR 34
A P+RT L T R
Sbjct: 124 AALPMRTAPSRALTATSR 141
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 155 MEGLCTSCRLRQRQARIPDETWRPDKQPCSSSDAKGHSC 271
+ G C +CR R+ + +P + RP+ C SS GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGRCISS---GHTC 41
>UniRef50_Q29471 Cluster: Annexin A13; n=24; Euteleostomi|Rep:
Annexin A13 - Canis familiaris (Dog)
Length = 316
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 96 RIFYEKRIGAEVEADQLGDEWKGYVLRVACGNDKQGF 206
+I +K I +EA+ GD K Y+ V C D++G+
Sbjct: 213 QILIDKDIEEAIEAETSGDLQKAYLTLVRCARDQEGY 249
>UniRef50_Q2IUU2 Cluster: Putative uncharacterized protein; n=1;
Rhodopseudomonas palustris HaA2|Rep: Putative
uncharacterized protein - Rhodopseudomonas palustris
(strain HaA2)
Length = 99
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 234 CLSGRHVSSGILACRCRKRHEVHSPSIHRLTDQPLLRRQCAFRKRYEACA--RPPLR 70
CL+G + RCRKR + +I R ++ P+ + R+R+ A RPP+R
Sbjct: 21 CLNGGMGWLEVECLRCRKRVSLPLSAIRRPSNSPVWALEAGLRRRFCATPRYRPPVR 77
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 VDEHKLRIFYEKRIGAEVEADQL-GDEWKGYVLRVACGNDKQGFPMKHGVLTNSRVRLLM 254
VD++K +IG EA+QL G K L++ G+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
>UniRef50_UPI0000E46956 Cluster: PREDICTED: similar to myostatin 1;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to myostatin 1 - Strongylocentrotus purpuratus
Length = 511
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1
Query: 250 RRRTRLFVRTPCFIGNPCLSLPQATR 173
RRR++ RTP FI NP LP ATR
Sbjct: 54 RRRSQDPFRTPGFIPNPAPELPSATR 79
>UniRef50_Q399U9 Cluster: Rhs family protein; n=2; Burkholderia
cepacia complex|Rep: Rhs family protein - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 1446
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 173 SCRLRQRQARIPDETWRPDKQPCSSSDAKGH 265
S + + R+ TW D+QP S +DA+GH
Sbjct: 529 SVTITDQIGRVTRWTWNEDQQPTSHTDAEGH 559
>UniRef50_Q6QT50 Cluster: FucA; n=14; Streptococcus|Rep: FucA -
Streptococcus gordonii
Length = 576
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 159 KGYVLRVACGNDKQGFPMKHGVLTNSR 239
+ Y +V+C N+K+GFP H LT+ R
Sbjct: 337 RAYQAKVSCSNEKEGFPSSH--LTDGR 361
>UniRef50_Q0BZ87 Cluster: YD repeat/RHS repeat protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: YD repeat/RHS
repeat protein - Hyphomonas neptunium (strain ATCC
15444)
Length = 1493
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +2
Query: 2 FDGIDRSHEVKRFV-PGNGMPEVVRS 76
+DG+ R E++R PG+G+P++VRS
Sbjct: 472 YDGVGRVTEIRRISKPGSGLPDMVRS 497
>UniRef50_A5N0X0 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 860
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 63 KLFEVVDEHKLRIFYEKRIGAEVEADQLGDE-WKGY 167
KL E ++HK IF +RI E LGDE WK Y
Sbjct: 747 KLIEDDNQHKYTIFLSRRIEDEKNNVLLGDEIWKEY 782
>UniRef50_A2XSM9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 212
Score = 30.3 bits (65), Expect = 8.9
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -2
Query: 168 HSPSIHRLTDQPLLRRQCAFRKRYEACARPPL-RTTSGIPLPGTKRLTS*L--RSIPSN 1
HSP RL P+LRR A ++ C L R +S +PL ++L + L S+P+N
Sbjct: 90 HSPPSIRLLMPPVLRRYFASLPSFDTCRYQGLMRDSSKLPLFDLRKLNASLPVASVPNN 148
>UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|Rep:
CG30115-PD, isoform D - Drosophila melanogaster (Fruit
fly)
Length = 1593
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 155 MEGLCTSCRLRQRQARIPDETWRPDKQPCS-SSDAK 259
++ L + R R+R A + +ET P K+PC DAK
Sbjct: 988 LQKLAAAMRYRKRDAAVKEETKTPVKEPCKCDQDAK 1023
>UniRef50_Q7RXT7 Cluster: Putative uncharacterized protein
NCU00421.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU00421.1 - Neurospora crassa
Length = 732
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 295 LSIAARSVT*VALCIRRRTRLFVRTPCFIGNP 200
LS++ T +A CIR +T+LF R+ +G+P
Sbjct: 313 LSLSGEFTTAIAHCIREQTQLFTRSLYSVGHP 344
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 111 KRIGAEVEADQLGDEWKGYVLRVACGNDKQGFPMKHGVLTNSRVRLLM 254
K+IG EV+A LG GY + + G+D+ G P + + R +LL+
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLL 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,980,037
Number of Sequences: 1657284
Number of extensions: 5598501
Number of successful extensions: 17355
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 16994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17354
length of database: 575,637,011
effective HSP length: 75
effective length of database: 451,340,711
effective search space used: 10380836353
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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