Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30668.Seq
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V447 Cluster: Protein Kr-h2; n=2; Sophophora|Rep: Pro... 114 2e-24
UniRef50_Q7PJT0 Cluster: ENSANGP00000023658; n=6; Neoptera|Rep: ... 104 2e-21
UniRef50_P57088 Cluster: Transmembrane protein 33; n=24; Eumetaz... 92 1e-17
UniRef50_Q803C2 Cluster: Transmembrane protein 33; n=5; Euteleos... 87 3e-16
UniRef50_UPI0000E468AC Cluster: PREDICTED: hypothetical protein;... 83 8e-15
UniRef50_Q5D930 Cluster: SJCHGC00341 protein; n=3; Schistosoma j... 83 8e-15
UniRef50_Q9XWV0 Cluster: UPF0121 protein Y37D8A.17; n=2; Caenorh... 72 1e-11
UniRef50_Q4P046 Cluster: Putative uncharacterized protein; n=1; ... 38 0.31
UniRef50_Q4Z213 Cluster: Putative uncharacterized protein; n=1; ... 36 0.71
UniRef50_Q6L1D3 Cluster: Transporter involved in lipid transport... 36 0.94
UniRef50_Q7YXA5 Cluster: Putative uncharacterized protein srh-1;... 35 2.2
UniRef50_Q94QP8 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 34 2.9
UniRef50_Q5CSE6 Cluster: Cation diffusion facilitator like membr... 34 3.8
UniRef50_Q1D6T0 Cluster: Acyltransferase family protein; n=1; My... 33 5.0
UniRef50_Q2H1D9 Cluster: Putative uncharacterized protein; n=7; ... 33 5.0
UniRef50_A6DLF1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_A6R2H7 Cluster: Predicted protein; n=4; Pezizomycotina|... 33 6.6
UniRef50_Q31LN7 Cluster: Putative uncharacterized protein; n=2; ... 33 8.8
UniRef50_Q125S6 Cluster: ABC transporter related; n=14; cellular... 33 8.8
UniRef50_Q54ME7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_Q9V447 Cluster: Protein Kr-h2; n=2; Sophophora|Rep:
Protein Kr-h2 - Drosophila melanogaster (Fruit fly)
Length = 276
Score = 114 bits (274), Expect = 2e-24
Identities = 53/92 (57%), Positives = 72/92 (78%)
Frame = +2
Query: 248 VPMFNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIF 427
+P+F + SAF K +LANAA SALRLHQR+PA + SR+F+AR F EDS HY+ YSLIF
Sbjct: 70 LPIFTSQQSAFSKVMLANAAISALRLHQRLPA--FAFSREFLARLFAEDSCHYMMYSLIF 127
Query: 428 MNVVPNLLILVPIFLFALLHAASYSLTSLILL 523
N+ P+LL+L+P+ L+++LHA+SYSL L L+
Sbjct: 128 FNIRPSLLVLIPVLLYSVLHASSYSLKLLDLI 159
Score = 56.8 bits (131), Expect = 5e-07
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 6/200 (3%)
Frame = +3
Query: 108 ADQNQQAGDTGPPKGIPA-LKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHST 284
+ Q Q+ + +PA L H N+ID ALW +R++ + T+ YV P T Q +
Sbjct: 22 SSQQQEQPQQSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSAFS 81
Query: 285 K-----RYSRTLRLQRCGYIKEFQHEXXXXXXXXXXXXXXXTALTIYSIHSFS*TSCPIC 449
K LRL + F E +L ++I P+
Sbjct: 82 KVMLANAAISALRLHQRLPAFAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIPVL 141
Query: 450 *YWCQSFYLRCYTPLRIP*LP*YSWSKFVVGGLVWLISLVEFQSRNILRAAALAEDRAVP 629
Y + Y+ + + SW G ++IS+VEFQ+ NIL+A A E +P
Sbjct: 142 LY--SVLHASSYSLKLLDLIGQNSW-----WGARFIISIVEFQAANILKATAFCEIFIMP 194
Query: 630 GRNSSWALFGHCGLMSPFVY 689
A H GLM+P +Y
Sbjct: 195 -YAIVLAFMNHAGLMTPVIY 213
>UniRef50_Q7PJT0 Cluster: ENSANGP00000023658; n=6; Neoptera|Rep:
ENSANGP00000023658 - Anopheles gambiae str. PEST
Length = 259
Score = 104 bits (249), Expect = 2e-21
Identities = 54/99 (54%), Positives = 72/99 (72%)
Frame = +2
Query: 257 FNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV 436
F N V+A+YK L+ANAATSA+RLHQR+P +LSR ++ + LEDS HYL +SLIF+ V
Sbjct: 52 FLNSVNAYYKVLMANAATSAIRLHQRLPP--FTLSRAYLQQTMLEDSFHYLLFSLIFLYV 109
Query: 437 VPNLLILVPIFLFALLHAASYSLTSLILLVKIRCGWARL 553
P L+I++P+ LF+LLH+ SYSLT L L + ARL
Sbjct: 110 YPLLVIILPVILFSLLHSTSYSLTLLDTLGQNSWWGARL 148
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +3
Query: 105 MADQNQQAGDTGPPKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCL 260
M+DQ + G ALK H++ANK++ W RV+T+ +GYV P L
Sbjct: 2 MSDQQRDQQSQQRQTGFAALKEHVLANKLETTQWVSRVLTIYFALGYVLPFL 53
Score = 42.3 bits (95), Expect = 0.011
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 555 LISLVEFQSRNILRAAALAEDRAVPGRNSSWALFGHCGLMSPFVY 689
LIS+VEFQ+RNILR AA +E +P FG G+M+P VY
Sbjct: 149 LISVVEFQTRNILRLAACSEILIMP-ITVLLVFFGKAGIMTPLVY 192
>UniRef50_P57088 Cluster: Transmembrane protein 33; n=24;
Eumetazoa|Rep: Transmembrane protein 33 - Homo sapiens
(Human)
Length = 247
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P +
Sbjct: 53 SFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTM 110
Query: 452 ILVPIFLFALLHAASYS 502
+ P+ LF+LLHAA+Y+
Sbjct: 111 SIFPVLLFSLLHAATYT 127
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 132 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHSTKRYSRTL 305
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V P L + + Y R L
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGL--HEAASFYQRAL 59
>UniRef50_Q803C2 Cluster: Transmembrane protein 33; n=5;
Euteleostomi|Rep: Transmembrane protein 33 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 252
Score = 87.4 bits (207), Expect = 3e-16
Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = +2
Query: 248 VPMFNNPVSA-FY-KALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSL 421
+P+ +A FY +ALLANA TSALRLHQR+P LSR F+A+ EDS HYL YSL
Sbjct: 48 LPLLGPQAAANFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALQEDSCHYLLYSL 105
Query: 422 IFMNVVPNLLILVPIFLFALLHAASYS 502
I +N P + + P+FLF+LLHA +Y+
Sbjct: 106 ILVNSYPITMSIFPVFLFSLLHATTYT 132
Score = 39.5 bits (88), Expect = 0.076
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +3
Query: 105 MADQNQQAGDTGPPKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHST 284
MAD Q++ PP A + +++NK++ A+W R+ TV C+I ++ P L Q +
Sbjct: 1 MADTEQRSPPPPPPPQAGAAQ-FLLSNKLETAMWLSRLFTVYCSIMFILPLLGPQA--AA 57
Query: 285 KRYSRTL 305
Y R L
Sbjct: 58 NFYQRAL 64
>UniRef50_UPI0000E468AC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 236
Score = 82.6 bits (195), Expect = 8e-15
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
S++ +AL+ N TSALRLHQR+P + +R ++ + LEDS H L YSLIF+N P
Sbjct: 84 SSYQRALILNGLTSALRLHQRMP--RVQFNRMYLGQLLLEDSCHNLLYSLIFINSYPLTF 141
Query: 452 ILVPIFLFALLHAASYS 502
+L P+FLFA+LH++S++
Sbjct: 142 VLTPVFLFAVLHSSSFT 158
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/61 (45%), Positives = 35/61 (57%)
Frame = +3
Query: 129 GDTGPPKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHSTKRYSRTLR 308
G TG GI + AH+ K+D ALW R+ TV+C+I YVFP L HS+ Y R L
Sbjct: 34 GATGGQFGIGKVVAHLTEFKVDAALWASRLATVVCSILYVFPILGQAAGHSS--YQRALI 91
Query: 309 L 311
L
Sbjct: 92 L 92
>UniRef50_Q5D930 Cluster: SJCHGC00341 protein; n=3; Schistosoma
japonicum|Rep: SJCHGC00341 protein - Schistosoma
japonicum (Blood fluke)
Length = 274
Score = 82.6 bits (195), Expect = 8e-15
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +2
Query: 278 FYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLIL 457
+ +ALLA+AATSALRLHQRI + SR+ + EDS+HYL +S++F + P + L
Sbjct: 62 YRRALLASAATSALRLHQRIKSLNTGFSREVLEVLITEDSSHYLLFSIMFAILPPVTVSL 121
Query: 458 VPIFLFALLHAASYS 502
VPIFLFALLH AS++
Sbjct: 122 VPIFLFALLHVASFT 136
>UniRef50_Q9XWV0 Cluster: UPF0121 protein Y37D8A.17; n=2;
Caenorhabditis|Rep: UPF0121 protein Y37D8A.17 -
Caenorhabditis elegans
Length = 271
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/76 (43%), Positives = 50/76 (65%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
SA+YK A+AAT ALRLH RI + +L+ F+ R +EDS HYL YS++F+ P +
Sbjct: 77 SAYYKIFAASAATFALRLHTRIQG-QFALNAQFIQRLIIEDSFHYLVYSVVFLMAAPVSM 135
Query: 452 ILVPIFLFALLHAASY 499
+P+ ++A LHA ++
Sbjct: 136 AALPVTIYAALHACTF 151
>UniRef50_Q4P046 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 298
Score = 37.5 bits (83), Expect = 0.31
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 356 LSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTSLILLV 526
L++ ++ R ++++ YLF ++ + P + LVP F+L H ++ T+LI +V
Sbjct: 69 LNKAYVQRALMDENVQYLFLAIYWFMSKPIFISLVPFVTFSLFHVLTFLRTTLIPIV 125
>UniRef50_Q4Z213 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 141
Score = 36.3 bits (80), Expect = 0.71
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 404 YLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTSLILLV 526
YLFY IF ++P IL+ I + +++A S +L S +LL+
Sbjct: 56 YLFYFDIFFGIIPINFILINIIILKIINAISLALFSFLLLI 96
>UniRef50_Q6L1D3 Cluster: Transporter involved in lipid transport;
n=1; Picrophilus torridus|Rep: Transporter involved in
lipid transport - Picrophilus torridus
Length = 891
Score = 35.9 bits (79), Expect = 0.94
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 383 FLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTSLILLV 526
+LE+S Y F F N++P L+I++ I LF LL++A L +I+++
Sbjct: 709 YLENS--YTFTESSFYNIIPMLIIVIYIILFILLYSALTPLRLIIIVI 754
>UniRef50_Q7YXA5 Cluster: Putative uncharacterized protein srh-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein srh-1 - Caenorhabditis elegans
Length = 311
Score = 34.7 bits (76), Expect = 2.2
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +2
Query: 239 WIRVPMFNNPVSAFYKALLANAATSAL-RLHQRIPAREISLSRDFMARFFLEDSAHYLFY 415
++ V + P++A Y L A+ L +L + R ISL R+F+ +++ + H +F
Sbjct: 194 FVGVAASSQPLAAVYFGLSVYASKLGLQKLKASLSQRTISLQRNFLHSLYIQTAVHVIFI 253
Query: 416 SLIFMNVVPNLLILVPIFLFALLHAASY---SLTSLILLV 526
S+ + +I +P + +L A SL++L L++
Sbjct: 254 SIPLGIFFLSFIIWIPSNMSYILTAMCTQHGSLSTLALMI 293
>UniRef50_Q94QP8 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=5; Bilateria|Rep: NADH-ubiquinone oxidoreductase chain
5 - Inversidens japanensis
Length = 588
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 368 FMARFFLEDSAHYLFYSLIFMNVVP-NLLILVPIFLFALLHAASYSLTSLILLV 526
F + D H LFYSL+ V N+LIL+P +F LL + S +L+V
Sbjct: 85 FSVSYMSGDKFHSLFYSLVAAFVAAMNILILIPNLVFVLLGWDLLGIISFLLVV 138
>UniRef50_Q5CSE6 Cluster: Cation diffusion facilitator like membrane
protein transporter, 6x transmembrane domains; n=2;
Cryptosporidium|Rep: Cation diffusion facilitator like
membrane protein transporter, 6x transmembrane domains -
Cryptosporidium parvum Iowa II
Length = 459
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 150 GIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHS-TKRYSRTLRLQRC 320
G+PAL HI+ D A + +R T LC Y TIQ +S K T+ Q+C
Sbjct: 379 GVPALSCHIVVASEDNARFTLRYATDLCQKKYGIFHTTIQIDYSPNKATCETIHHQKC 436
>UniRef50_Q1D6T0 Cluster: Acyltransferase family protein; n=1;
Myxococcus xanthus DK 1622|Rep: Acyltransferase family
protein - Myxococcus xanthus (strain DK 1622)
Length = 422
Score = 33.5 bits (73), Expect = 5.0
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +2
Query: 380 FFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTSLILLVKIRCGWARLAH 559
FF ED L+ SL F+ P LL ++P+++ LL LT ILL + GW R+
Sbjct: 164 FFHEDPFTALWSSL-FLLYCPPLLDILPLYVVLLL------LTPFILLGARKAGWTRILC 216
Query: 560 LPGRV 574
L G V
Sbjct: 217 LSGLV 221
>UniRef50_Q2H1D9 Cluster: Putative uncharacterized protein; n=7;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 287
Score = 33.5 bits (73), Expect = 5.0
Identities = 20/101 (19%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +2
Query: 224 RAVYHWIRVPMFNNPVSAFYK-ALLANAATSALRLHQRIPAREISLSRD--FMARFFLED 394
R + WIR+ + Y+ A L+ A T + +++ AR+ + ++ + + ++
Sbjct: 39 RYSFSWIRMNYYGGVAQFCYRFAFLSAAGTYGIVVYKTWRARQKTGAKQPGGVLGYLSDE 98
Query: 395 SAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTSLI 517
+ YL +L+++ + L L+P ++++ H A+Y ++++
Sbjct: 99 NVQYLVMALVWLFMPQYPLALLPYGIYSIFHVATYVGSTIV 139
>UniRef50_A6DLF1 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 304
Score = 33.1 bits (72), Expect = 6.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 254 WEHVSNGTQHGDYADPPKSYVYFIGNDVSFQGWDAFWWTSVACL 123
W + G + D Y + +GN F G+ AF W ++ CL
Sbjct: 247 WVCIIKGNSNVTRTDGDSPYYWLVGNYDKFTGYAAFLWLAIICL 290
>UniRef50_A6R2H7 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 285
Score = 33.1 bits (72), Expect = 6.6
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
+A Y ++ A + RL IPA + L+ D ++ YLF +L+++ +
Sbjct: 60 AATYGIVVYKAYIARGRLGGSIPATAMKLAGD--------ENVQYLFMALVWLYSRQIPI 111
Query: 452 ILVPIFLFALLHAASYSLTSLI-LLVKIRCGWARLAHLPGRVPVAEHPPXXXXXXXXXXX 628
L+P ++++ H A+Y+ T LI L + A P PV + P
Sbjct: 112 ALLPFAIYSVFHVATYTRTYLIPTLQPPKPAAPGEATSPSGRPVTKQSPLAESIGRFVKR 171
Query: 629 XXXLIMGIVRSLRLDESVRIL 691
MG+V + + R++
Sbjct: 172 YYDTSMGLVAAFEMSLMFRLI 192
>UniRef50_Q31LN7 Cluster: Putative uncharacterized protein; n=2;
Synechococcus elongatus|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain PCC 7942) (Anacystis
nidulans R2)
Length = 236
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 219 LRGPPKELRLFYWQ-*CELSRLGCLLVDQCRLLADFDRP 106
LRG P++LR +WQ CE++R G L + + LL F RP
Sbjct: 183 LRGAPEQLRPGWWQFDCEVTRYGQLRIVEAELLVPF-RP 220
>UniRef50_Q125S6 Cluster: ABC transporter related; n=14; cellular
organisms|Rep: ABC transporter related - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 370
Score = 32.7 bits (71), Expect = 8.8
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 224 RAVYHWIRVPMFNNPVSAFYKALLANAATSALRLHQRIPAREISLSRD 367
RA+ +V +F+ P+S AL N +RLHQR+ A I ++ D
Sbjct: 148 RAIVREPKVFLFDEPLSNLDAALRVNTRNELVRLHQRLNATMIYVTHD 195
>UniRef50_Q54ME7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 290
Score = 32.7 bits (71), Expect = 8.8
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 278 FYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV-VPNLLI 454
FYKALL ++ + R+ R A+ +++A ++FY +IF +L+
Sbjct: 110 FYKALLGATIAYSIPIFNTFEGRKPD--RALAAQLVQDENAQFVFYCMIFYFFGSSSLVY 167
Query: 455 LVPIFLFALLH 487
L+P F+++ H
Sbjct: 168 LLPNFIYSFFH 178
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,279,357
Number of Sequences: 1657284
Number of extensions: 14636645
Number of successful extensions: 40233
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 38965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40212
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -