Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30668.Seq
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 540  GGLVWLISLVEFQSR 584
            GG+VW + L +F++R
Sbjct: 2657 GGMVWALDLDDFKNR 2671



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +3

Query: 540  GGLVWLISLVEFQSR 584
            GG++W + L +F++R
Sbjct: 1734 GGMIWALDLDDFKNR 1748



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 241  PMVHSTVITRTPQRATS 191
            P VHS+ +   PQ +T+
Sbjct: 1797 PSVHSSTVVPPPQHSTT 1813


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 469 FICAATRRFVFLDFL 513
           +ICA T+R +F++FL
Sbjct: 368 WICAITKRDMFVEFL 382


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 469 FICAATRRFVFLDFL 513
           +ICA T+R +F++FL
Sbjct: 93  WICAITKRDMFVEFL 107


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 138 GPPKGIPALKAHIIANKIDVALWGVRV 218
           GP +    L AH++A    V L G+RV
Sbjct: 333 GPARSRRHLPAHLVAGTCFVQLIGMRV 359


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 188 NRRSSLGGPRNHRAVYHWIRVPMFNNP 268
           N R    GPR   AVY  +R+   + P
Sbjct: 179 NIRLKRAGPRTESAVYEPVRIMGVHRP 205


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +2

Query: 284 KALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 463
           K LL+N    +++++  I  +E + +    +  F   + + LFY  +  +V  NL   VP
Sbjct: 136 KTLLSNL--ESIQIYS-IKPKERNSNHWVRSGLFALITGNVLFYPFLPSDVSYNLFSFVP 192

Query: 464 IFLFALLH 487
           + + AL H
Sbjct: 193 LVVNALDH 200


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +2

Query: 284 KALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 463
           K LL+N    +++++  I  +E + +    +  F   + + LFY  +  +V  NL   VP
Sbjct: 92  KTLLSNL--ESIQIYS-IKPKERNSNHWVRSGLFALITGNVLFYPFLPSDVSYNLFSFVP 148

Query: 464 IFLFALLH 487
           + + AL H
Sbjct: 149 LVVNALDH 156


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 268 WIVKHGNTYPMVHSTVITRTPQRAT 194
           W + H   YP V +TV   T  R T
Sbjct: 235 WFLPHQPIYPAVTATVQLSTCTRTT 259


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 232 VPLDTCSHV*QSSVGI 279
           +P+D C+H+  S +G+
Sbjct: 46  LPVDLCTHIVYSFIGV 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,656
Number of Sequences: 336
Number of extensions: 3557
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)