Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30668.Seq
(694 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06) 30 1.5
SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043) 30 1.5
SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_43938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50729| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12) 29 4.7
SB_8047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_56967| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_30356| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 29 4.7
SB_742| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_59238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_41956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24159| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_4994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_43731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_41197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_36615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_17901| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_50135| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87) 28 8.3
SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_25921| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_14602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8545| Best HMM Match : C2 (HMM E-Value=0.00073) 28 8.3
SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28) 28 8.3
SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_50032| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_46352| Best HMM Match : L71 (HMM E-Value=0.19) 28 8.3
SB_46171| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_45427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_31357| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_26762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_17082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_13869| Best HMM Match : Antirestrict (HMM E-Value=4.5) 28 8.3
SB_13618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_12793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06)
Length = 183
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 LVDPPGCRNSARAI 42
LVDPPGCRNS R +
Sbjct: 15 LVDPPGCRNSIRTV 28
>SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043)
Length = 205
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 1 LVDPPGCRNSARAIIS 48
LVDPPGCRNS A +S
Sbjct: 15 LVDPPGCRNSMNANVS 30
>SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 1 LVDPPGCRNSARA 39
LVDPPGCRNS R+
Sbjct: 15 LVDPPGCRNSIRS 27
>SB_43938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 1 LVDPPGCRNSARAIIS*YFI 60
LVDPPGCRNS I Y +
Sbjct: 15 LVDPPGCRNSINTINHIYHV 34
>SB_50729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 50 YEIIARAEFLQPGGST 3
Y II+ EFLQPGGST
Sbjct: 16 YNIISSIEFLQPGGST 31
>SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 1 LVDPPGCRNSARA 39
LVDPPGCRNS +A
Sbjct: 15 LVDPPGCRNSIQA 27
>SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 103 LIQGIKVRAWTTKII*NTMK**LVPNSCSPGDPL 2
L +G K+ ++ +T+ L+ NSCSPGDPL
Sbjct: 12 LTKGNKMLVRGPPLLRSTVSISLISNSCSPGDPL 45
>SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)
Length = 979
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 194 RSSLGGPRNHRAVYHWIRVP-MFNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDF 370
+S G + RA W+ +F NPV+ ++ A AL + + A EI+L
Sbjct: 885 KSGTQGDADRRATGLWVHKDGLFGNPVNTIFQDSSKKALYKALAEYNPVEAGEIALVEGD 944
Query: 371 MARFFLEDSA 400
F E +A
Sbjct: 945 TVSFVREGNA 954
>SB_8047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 1 LVDPPGCRNSARAI 42
LVDPPGCRNS I
Sbjct: 15 LVDPPGCRNSIEVI 28
>SB_56967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1
Query: 64 II*NTMK**LVPNSCSPGDPL 2
+I NT++ LV NSCSPGDPL
Sbjct: 1 MIHNTLRI-LVSNSCSPGDPL 20
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 1 LVDPPGCRNSARAII 45
LVDPPGCRNS + +
Sbjct: 70 LVDPPGCRNSMKVCV 84
>SB_30356| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 FNNPVSAFYKA-LLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIF 427
F +P AFY LL A R+ R+P LSR A + DS + S+ F
Sbjct: 299 FTDPTKAFYVTQLLKGYAKQGARVDTRLPITLAILSRILSAANIITDSPYEAMCSVAF 356
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 1 LVDPPGCRNSARAII 45
LVDPPGCRNS + ++
Sbjct: 102 LVDPPGCRNSIQQMV 116
>SB_742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Frame = +3
Query: 3 SGSPGLQEF--------GTSYYFIVFYIILVVQARTLIP*INMADQNQQAGDTGPPKGIP 158
SGSPGLQEF + F+ FY I ++ P I M G P G P
Sbjct: 15 SGSPGLQEFDEYLLLTVSANLVFVCFYFIFRMEMEIQRPQIGMIKLIDTVDLEGGPVGKP 74
Query: 159 ALKAHII 179
+ A ++
Sbjct: 75 VVPAALM 81
>SB_59238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
LV NSCSPGDPL
Sbjct: 24 LVSNSCSPGDPL 35
>SB_41956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
LV NSCSPGDPL
Sbjct: 3 LVSNSCSPGDPL 14
>SB_24159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
LV NSCSPGDPL
Sbjct: 17 LVSNSCSPGDPL 28
>SB_4994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1
Query: 1 LVDPPGCRNSARA 39
LVDPPGCRNS A
Sbjct: 15 LVDPPGCRNSIAA 27
>SB_43731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
LV NSCSPGDPL
Sbjct: 5 LVSNSCSPGDPL 16
>SB_41197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
LV NSCSPGDPL
Sbjct: 2 LVSNSCSPGDPL 13
>SB_36615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = -3
Query: 62 YIKYYE-IIARAEFLQPGGST 3
Y+ Y E ++ + EFLQPGGST
Sbjct: 6 YLTYAEAVLQKIEFLQPGGST 26
>SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
LV NSCSPGDPL
Sbjct: 26 LVSNSCSPGDPL 37
>SB_17901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
LV NSCSPGDPL
Sbjct: 26 LVSNSCSPGDPL 37
>SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 33 LISNSCSPGDPL 44
>SB_50135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 17 LISNSCSPGDPL 28
>SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87)
Length = 209
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 1 LVDPPGCRNSAR 36
LVDPPGCRNS +
Sbjct: 15 LVDPPGCRNSIK 26
>SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 1 LVDPPGCRNSAR 36
LVDPPGCRNS +
Sbjct: 15 LVDPPGCRNSMK 26
>SB_25921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 37 LISNSCSPGDPL 48
>SB_14602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 47 EIIARAEFLQPGGST 3
EI +R EFLQPGGST
Sbjct: 12 EIKSRIEFLQPGGST 26
>SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 1 LVDPPGCRNSAR 36
LVDPPGCRNS +
Sbjct: 15 LVDPPGCRNSIK 26
>SB_8545| Best HMM Match : C2 (HMM E-Value=0.00073)
Length = 106
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 1 LVDPPGCRNSAR 36
LVDPPGCRNS +
Sbjct: 15 LVDPPGCRNSMK 26
>SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 8 LISNSCSPGDPL 19
>SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28)
Length = 951
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 398 RCPPGRTSP*NPARGRSLVLEFFDVAAALKSQRSRVTLC 282
RCPPGR P P + + LV FD+ +K + S + +C
Sbjct: 85 RCPPGRGGPILPVKTK-LVPSLFDIDLEVK-KGSLIGIC 121
>SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 33 LISNSCSPGDPL 44
>SB_50032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 33 LISNSCSPGDPL 44
>SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 33 LISNSCSPGDPL 44
>SB_46352| Best HMM Match : L71 (HMM E-Value=0.19)
Length = 179
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 1 LVDPPGCRNSAR 36
LVDPPGCRNS +
Sbjct: 15 LVDPPGCRNSIK 26
>SB_46171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 47 EIIARAEFLQPGGST 3
E++ R EFLQPGGST
Sbjct: 3 EVMHRIEFLQPGGST 17
>SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 1 LVDPPGCRNSAR 36
LVDPPGCRNS +
Sbjct: 15 LVDPPGCRNSIK 26
>SB_45427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 24 LISNSCSPGDPL 35
>SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 33 LISNSCSPGDPL 44
>SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 33 LISNSCSPGDPL 44
>SB_31357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 40 LISNSCSPGDPL 51
>SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 33 LISNSCSPGDPL 44
>SB_26762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 70 LISNSCSPGDPL 81
>SB_17082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 21 LISNSCSPGDPL 32
>SB_13869| Best HMM Match : Antirestrict (HMM E-Value=4.5)
Length = 149
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3
Query: 44 IIARAEFLQPGGST 3
I AR EFLQPGGST
Sbjct: 22 IYARIEFLQPGGST 35
>SB_13618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 56 KYYEIIARAEFLQPGGST 3
++Y +I EFLQPGGST
Sbjct: 5 RHYYVIKFIEFLQPGGST 22
>SB_12793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 16 LISNSCSPGDPL 27
>SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 33 LISNSCSPGDPL 44
>SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 1 LVDPPGCRNSAR 36
LVDPPGCRNS +
Sbjct: 15 LVDPPGCRNSMK 26
>SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 LVPNSCSPGDPL 2
L+ NSCSPGDPL
Sbjct: 31 LISNSCSPGDPL 42
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,057,556
Number of Sequences: 59808
Number of extensions: 452296
Number of successful extensions: 2632
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2632
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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