Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30668.Seq
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   0.98 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.3  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.0  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.0  
AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.    24   5.2  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    24   5.2  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    24   5.2  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    23   6.9  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    23   6.9  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   9.1  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   9.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +2

Query: 47   HSILYNFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHH 178
            HS+ Y     +++F  +  Y ++        STKR P  E S++
Sbjct: 2079 HSLRYPMDSAASSFTLIYDYNKNGEVKSIKESTKRVPMFEFSYN 2122


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 371 MARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTSLILLVKIRCGWAR 550
           M R  LE+    LFY  +    +  + ++VP     L+    YS   +I +   R  + R
Sbjct: 252 MERLSLEEKLRVLFYEFLPYLAIVCMNLVVPQLFNYLVQYEKYSPLFVIKISLFRTVFLR 311

Query: 551 LAHL 562
           L+ L
Sbjct: 312 LSSL 315



 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/68 (20%), Positives = 29/68 (42%)
 Frame = +3

Query: 63  ILVVQARTLIP*INMADQNQQAGDTGPPKGIPALKAHIIANKIDVALWGVRVITVLCTIG 242
           +L+     L+P +    +   +   GP +G+P++    IA  + +  +   VI    T  
Sbjct: 505 LLISFTLALVPVVYALAEIVPSRSCGPFRGLPSVWDRAIAAFMKMPQFFQNVIFYFGTAS 564

Query: 243 YVFPCLTI 266
           +  PC  +
Sbjct: 565 FAIPCFVV 572


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 404 YLFYSLIFMNVVPNLLILVPIFLFALLHAAS 496
           Y  ++L+FM ++P LLIL+  +L   +  +S
Sbjct: 349 YTTFTLVFMFIIP-LLILIGTYLSTFMTISS 378


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 404 YLFYSLIFMNVVPNLLILVPIFLFALLHAAS 496
           Y  ++L+FM ++P LLIL+  +L   +  +S
Sbjct: 350 YTTFTLVFMFIIP-LLILIGTYLSTFMTISS 379


>AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 230 VYHWIRVPMFNNPV 271
           V + +RVP+FNNPV
Sbjct: 7   VKNTMRVPLFNNPV 20


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +2

Query: 326 HQRIPAREISLSRDFMAR--FFLEDSAHY---LFYSLIFMNVVPNLLILVPIFLFAL 481
           + R+ +R  SL R++  R   +L    ++   L+YSL+  NV  + L L+P  +  L
Sbjct: 82  YARVVSRVKSLQREYADRNPIYLNAGDNFQGTLWYSLLRWNVTAHFLNLLPADVMTL 138


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +2

Query: 326 HQRIPAREISLSRDFMAR--FFLEDSAHY---LFYSLIFMNVVPNLLILVPIFLFAL 481
           + R+ +R  SL R++  R   +L    ++   L+YSL+  NV  + L L+P  +  L
Sbjct: 82  YARVVSRVKSLQREYADRNPIYLNAGDNFQGTLWYSLLRWNVTAHFLNLLPADVMTL 138


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 588 ILRAAALAEDRAVPGRNSSWALFGHCGLMSPFVY 689
           +L+   + E RAV    ++W + G C L   F++
Sbjct: 150 VLKPLKVHEHRAVLMIAAAWIMSGLCSLPQAFIF 183


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 588 ILRAAALAEDRAVPGRNSSWALFGHCGLMSPFVY 689
           +L+   + E RAV    ++W + G C L   F++
Sbjct: 150 VLKPLKVHEHRAVLMIAAAWIMSGLCSLPQAFIF 183


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 140 STKRHPSLESSHHCQ*NRRSSLGGPRNHRAVYHWI 244
           S  R P +    H Q  RRSS    R  R+V +++
Sbjct: 60  SKNRMPPVPPPKHSQRRRRSSSPRTRQFRSVCYYV 94


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 500 NTKRRVAAQIKRLAPILTNWARRS*K*VNRINSERCPPGR 381
           N  +   A I+++ P   N  RRS +   R  S R PP R
Sbjct: 238 NIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPAR 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,003
Number of Sequences: 2352
Number of extensions: 15187
Number of successful extensions: 32
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)