Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30668.Seq
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457260-1|CAG33541.1| 247|Homo sapiens FLJ10525 protein. 92 2e-18
BC000948-1|AAH00948.2| 247|Homo sapiens transmembrane protein 3... 92 2e-18
AY659966-1|AAV70491.1| 247|Homo sapiens SHINC3 protein. 92 2e-18
AK023062-1|BAB14384.1| 247|Homo sapiens protein ( Homo sapiens ... 92 2e-18
AK001387-1|BAA91665.1| 247|Homo sapiens protein ( Homo sapiens ... 92 2e-18
BC075825-1|AAH75825.1| 661|Homo sapiens ALS2CL protein protein. 32 1.7
BC061883-1|AAH61883.1| 661|Homo sapiens ALS2CL protein protein. 32 1.7
BC042906-1|AAH42906.1| 661|Homo sapiens ALS2CL protein protein. 32 1.7
AK131273-1|BAD18450.1| 705|Homo sapiens protein ( Homo sapiens ... 32 1.7
AK131270-1|BAD18448.1| 953|Homo sapiens protein ( Homo sapiens ... 32 1.7
AK093844-1|BAC04237.1| 468|Homo sapiens protein ( Homo sapiens ... 32 1.7
AK092455-1|BAC03895.1| 300|Homo sapiens protein ( Homo sapiens ... 32 1.7
AB107015-1|BAD51817.1| 953|Homo sapiens ALS2 C-terminal like pr... 32 1.7
AB065559-1|BAC05797.1| 304|Homo sapiens seven transmembrane hel... 31 5.2
L29220-1|AAA61483.1| 152|Homo sapiens clk3 protein. 30 9.0
BC039904-1|AAH39904.1| 972|Homo sapiens HDAC4 protein protein. 30 9.0
AF132607-1|AAD29046.1| 1084|Homo sapiens histone deacetylase 4 p... 30 9.0
AC017028-1|AAX93070.1| 1052|Homo sapiens unknown protein. 30 9.0
AB006626-1|BAA22957.2| 1097|Homo sapiens KIAA0288 protein protein. 30 9.0
>CR457260-1|CAG33541.1| 247|Homo sapiens FLJ10525 protein.
Length = 247
Score = 91.9 bits (218), Expect = 2e-18
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P +
Sbjct: 53 SFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTM 110
Query: 452 ILVPIFLFALLHAASYS 502
+ P+ LF+LLHAA+Y+
Sbjct: 111 SIFPVLLFSLLHAATYT 127
Score = 35.1 bits (77), Expect = 0.24
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 132 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHSTKRYSRTL 305
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V P L + + Y R L
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGL--HEAASFYQRAL 59
>BC000948-1|AAH00948.2| 247|Homo sapiens transmembrane protein 33
protein.
Length = 247
Score = 91.9 bits (218), Expect = 2e-18
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P +
Sbjct: 53 SFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTM 110
Query: 452 ILVPIFLFALLHAASYS 502
+ P+ LF+LLHAA+Y+
Sbjct: 111 SIFPVLLFSLLHAATYT 127
Score = 35.1 bits (77), Expect = 0.24
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 132 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHSTKRYSRTL 305
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V P L + + Y R L
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGL--HEAASFYQRAL 59
>AY659966-1|AAV70491.1| 247|Homo sapiens SHINC3 protein.
Length = 247
Score = 91.9 bits (218), Expect = 2e-18
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P +
Sbjct: 53 SFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTM 110
Query: 452 ILVPIFLFALLHAASYS 502
+ P+ LF+LLHAA+Y+
Sbjct: 111 SIFPVLLFSLLHAATYT 127
Score = 35.1 bits (77), Expect = 0.24
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 132 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHSTKRYSRTL 305
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V P L + + Y R L
Sbjct: 3 DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGL--HEAASFYQRAL 59
>AK023062-1|BAB14384.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ13000 fis, clone NT2RP3000333, highly similar to
Rattus norvegicus db83 mRNA. ).
Length = 247
Score = 91.9 bits (218), Expect = 2e-18
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P +
Sbjct: 53 SFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTM 110
Query: 452 ILVPIFLFALLHAASYS 502
+ P+ LF+LLHAA+Y+
Sbjct: 111 SIFPVLLFSLLHAATYT 127
Score = 35.1 bits (77), Expect = 0.24
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 132 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHSTKRYSRTL 305
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V P L + + Y R L
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGL--HEAASFYQRAL 59
>AK001387-1|BAA91665.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ10525 fis, clone NT2RP2000892. ).
Length = 247
Score = 91.9 bits (218), Expect = 2e-18
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +2
Query: 272 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 451
S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N P +
Sbjct: 53 SFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTM 110
Query: 452 ILVPIFLFALLHAASYS 502
+ P+ LF+LLHAA+Y+
Sbjct: 111 SIFPVLLFSLLHAATYT 127
Score = 35.1 bits (77), Expect = 0.24
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 132 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPCLTIQCRHSTKRYSRTL 305
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V P L + + Y R L
Sbjct: 3 DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGL--HEAASFYQRAL 59
>BC075825-1|AAH75825.1| 661|Homo sapiens ALS2CL protein protein.
Length = 661
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 316 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 489
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509
Query: 490 RFVFLDFLDTLGQNSLW 540
L+FLD Q LW
Sbjct: 510 ---LLEFLDV--QKHLW 521
>BC061883-1|AAH61883.1| 661|Homo sapiens ALS2CL protein protein.
Length = 661
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 316 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 489
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509
Query: 490 RFVFLDFLDTLGQNSLW 540
L+FLD Q LW
Sbjct: 510 ---LLEFLDV--QKHLW 521
>BC042906-1|AAH42906.1| 661|Homo sapiens ALS2CL protein protein.
Length = 661
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 316 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 489
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 450 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 509
Query: 490 RFVFLDFLDTLGQNSLW 540
L+FLD Q LW
Sbjct: 510 ---LLEFLDV--QKHLW 521
>AK131273-1|BAD18450.1| 705|Homo sapiens protein ( Homo sapiens
cDNA FLJ16212 fis, clone CTONG2024031. ).
Length = 705
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 316 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 489
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 543 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 602
Query: 490 RFVFLDFLDTLGQNSLW 540
L+FLD Q LW
Sbjct: 603 ---LLEFLDV--QKHLW 614
>AK131270-1|BAD18448.1| 953|Homo sapiens protein ( Homo sapiens
cDNA FLJ16208 fis, clone CTONG2020374. ).
Length = 953
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 316 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 489
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 742 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 801
Query: 490 RFVFLDFLDTLGQNSLW 540
L+FLD Q LW
Sbjct: 802 ---LLEFLDV--QKHLW 813
>AK093844-1|BAC04237.1| 468|Homo sapiens protein ( Homo sapiens
cDNA FLJ36525 fis, clone TRACH2002988. ).
Length = 468
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 316 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 489
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 257 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 316
Query: 490 RFVFLDFLDTLGQNSLW 540
L+FLD Q LW
Sbjct: 317 ---LLEFLDV--QKHLW 328
>AK092455-1|BAC03895.1| 300|Homo sapiens protein ( Homo sapiens
cDNA FLJ35136 fis, clone PLACE6009338. ).
Length = 300
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 316 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 489
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 89 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 148
Query: 490 RFVFLDFLDTLGQNSLW 540
L+FLD Q LW
Sbjct: 149 ---LLEFLDV--QKHLW 160
>AB107015-1|BAD51817.1| 953|Homo sapiens ALS2 C-terminal like
protein.
Length = 953
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 316 AAATSKNSSTRDLPLAGFHGEV-LPGGQRSLFILFTHFHERRAQFVNIG-ANLFICAATR 489
A +++ TRDL + G + LP LF L+ HER F + G ANL + T+
Sbjct: 742 ALEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQ 801
Query: 490 RFVFLDFLDTLGQNSLW 540
L+FLD Q LW
Sbjct: 802 ---LLEFLDV--QKHLW 813
>AB065559-1|BAC05797.1| 304|Homo sapiens seven transmembrane helix
receptor protein.
Length = 304
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 404 YLFYSLIFMNVV-PNLLILVPIFLFALLHAASYSLTS 511
+L +S++F+ +V NLLILV + +LLH Y L S
Sbjct: 28 FLGFSVVFVGIVLGNLLILVTVTFDSLLHTPMYFLLS 64
>L29220-1|AAA61483.1| 152|Homo sapiens clk3 protein.
Length = 152
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 104 YGRSKSASRRHWSTKRHP--SLESSHHCQ*NRRSSLGGPRNHRAVYHWIRVPM 256
YG S+S RR S +R P + + +HHC R S + R W++ P+
Sbjct: 84 YGPSRSRHRRR-SRERGPYRTRKHAHHCHKRRTRSCSSASSMRLWGTWVKAPL 135
>BC039904-1|AAH39904.1| 972|Homo sapiens HDAC4 protein protein.
Length = 972
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 335 FFDVAAALKSQRSRVTLCRMPTLDC*TWE-HVSNGTQHGDYADPPKSYV 192
F VA A K + R+++ ++ +D W+ H NGTQ Y+DP Y+
Sbjct: 703 FNSVAVAAKLLQQRLSVSKILIVD---WDVHHGNGTQQAFYSDPSVLYM 748
>AF132607-1|AAD29046.1| 1084|Homo sapiens histone deacetylase 4
protein.
Length = 1084
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 335 FFDVAAALKSQRSRVTLCRMPTLDC*TWE-HVSNGTQHGDYADPPKSYV 192
F VA A K + R+++ ++ +D W+ H NGTQ Y+DP Y+
Sbjct: 815 FNSVAVAAKLLQQRLSVSKILIVD---WDVHHGNGTQQAFYSDPSVLYM 860
>AC017028-1|AAX93070.1| 1052|Homo sapiens unknown protein.
Length = 1052
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 335 FFDVAAALKSQRSRVTLCRMPTLDC*TWE-HVSNGTQHGDYADPPKSYV 192
F VA A K + R+++ ++ +D W+ H NGTQ Y+DP Y+
Sbjct: 783 FNSVAVAAKLLQQRLSVSKILIVD---WDVHHGNGTQQAFYSDPSVLYM 828
>AB006626-1|BAA22957.2| 1097|Homo sapiens KIAA0288 protein protein.
Length = 1097
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 335 FFDVAAALKSQRSRVTLCRMPTLDC*TWE-HVSNGTQHGDYADPPKSYV 192
F VA A K + R+++ ++ +D W+ H NGTQ Y+DP Y+
Sbjct: 828 FNSVAVAAKLLQQRLSVSKILIVD---WDVHHGNGTQQAFYSDPSVLYM 873
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,450,841
Number of Sequences: 237096
Number of extensions: 2236438
Number of successful extensions: 5433
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5428
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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