Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30663.Seq
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1370 - 32990002-32990244,32990950-32991943,32992019-329922... 50 1e-06
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 36 0.034
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285... 33 0.18
03_02_0100 + 5622360-5622524,5622603-5622701,5622979-5623044 33 0.32
09_06_0081 + 20745627-20748144,20748211-20748308 32 0.42
09_04_0494 + 18056679-18056819,18058307-18058374,18058708-180588... 32 0.42
06_03_0518 - 21685950-21686221,21686768-21686882 32 0.56
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 31 0.74
10_08_0050 + 14469879-14470072,14470620-14471094 31 1.3
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 31 1.3
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 30 2.2
10_08_0042 - 14383143-14383628,14383647-14384609,14384697-143864... 30 2.2
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 30 2.2
08_01_0525 + 4564885-4565221,4565337-4565476,4565582-4565677,456... 30 2.2
12_02_0625 - 21331209-21331273,21331364-21331555,21332348-213325... 29 3.0
05_05_0142 - 22673607-22674134 29 3.0
03_05_0799 + 27809301-27811550 29 3.0
02_01_0593 + 4408229-4408294,4408764-4409096,4409756-4409794,440... 29 3.0
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 29 3.9
03_02_0175 + 6146637-6146909 29 3.9
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 29 3.9
09_01_0117 + 1808669-1809181,1810038-1810059,1810170-1810223,181... 29 5.2
04_04_1220 + 31843628-31844755 29 5.2
01_06_0049 - 25953811-25954131,25954223-25954903 29 5.2
01_01_0937 - 7388230-7388283,7388957-7389091,7389201-7389365,738... 29 5.2
10_08_0270 + 16378878-16380566 28 6.9
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016 28 6.9
03_05_0355 - 23420410-23420548,23420643-23420794 28 6.9
02_05_0921 + 32739495-32739696,32739815-32740002,32740132-327403... 28 6.9
02_01_0360 - 2594534-2594601,2594778-2594829,2594915-2595029,259... 28 6.9
01_01_0078 + 587975-588179,588506-588606,589087-589167,589240-59... 28 6.9
10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998 28 9.1
09_02_0608 + 11194889-11195134,11195185-11195406 28 9.1
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 28 9.1
08_02_0292 - 15420378-15421229 28 9.1
05_07_0308 + 29115892-29116083,29116771-29116885,29116978-291170... 28 9.1
05_04_0031 + 17353292-17354353 28 9.1
05_02_0160 - 7194699-7195019,7195207-7195368,7195806-7195953,719... 28 9.1
04_04_0555 - 26210346-26211458,26211530-26211719,26211826-262119... 28 9.1
02_01_0382 - 2772378-2773544 28 9.1
01_06_0040 - 25874308-25874611,25875743-25875822,25876764-258769... 28 9.1
>04_04_1370 -
32990002-32990244,32990950-32991943,32992019-32992240,
32993413-32993543
Length = 529
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = -3
Query: 509 VQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVW 402
+Q+QADLLG PV+RP +E+TALGAA AG A+ VW
Sbjct: 446 MQIQADLLGSPVVRPADIETTALGAAYAAGLAVGVW 481
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 702 PYWRKDARGVMCGLSERTRRQHIVR 628
P+WR DARG+ G++ T + HI R
Sbjct: 373 PWWRDDARGICIGITRFTNKGHIAR 397
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 490 KSAC-ICTELSSAPSLRRRGVASGARSLQPSRPPRRASGD 606
+ AC + ++ PS RRRG G R P P RR SGD
Sbjct: 15 RPACRVASQCGGRPSTRRRGAGGGPRRAVPQPPVRRPSGD 54
>02_04_0028 +
19027510-19027983,19028087-19028278,19028369-19028545,
19029568-19029663,19030487-19030618,19030950-19031008,
19031234-19031321,19031433-19031693
Length = 492
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 508 TELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPSAAPDNMLTSSPFAQTAHHSPGV 687
T+ + S GA + QP RPP+ G TRPP P S + +PG
Sbjct: 18 TQRRESTSTSTAAAEGGAVASQPPRPPQPRPGTTRPPLWRPPRWPWGSSSSAATAAAPGG 77
Query: 688 FSPIWANKG 714
S A +G
Sbjct: 78 ASTAAAAQG 86
>03_02_0100 + 5622360-5622524,5622603-5622701,5622979-5623044
Length = 109
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -3
Query: 626 AALGGRVSPDARRGGRDGCRLRAPEATPRRRRDGAELSSVQMQADLLGIPVIRPLMMEST 447
A GRV PD R GC +R E R R +++S ++Q G ++ + +
Sbjct: 17 AVTRGRVEPDGRAASASGCLMRRSEGRRRPWRHLLKITSEEIQQVQQGFLTVQKFQVSTA 76
Query: 446 ALGAAIV 426
L I+
Sbjct: 77 ILQIIII 83
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 32.3 bits (70), Expect = 0.42
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +1
Query: 430 MAAPRAVLSIMRGRMTGIPSKSACICTELSSAPS--LRRRGVASGARSLQPSRPPRRASG 603
+ AP A M P SA + + PS L R +A R+L+ S P RAS
Sbjct: 536 VTAPPATAPPMIAPPVATPPDSASSPSTVPRMPSAPLALRALAPHLRALRVSVPHPRASS 595
Query: 604 DTRPPSAAPDNMLTSSPFAQTAHHSPGVFS 693
PP AAP S A+ + G S
Sbjct: 596 APAPPVAAPRGWTVSPTTARYSFSDSGASS 625
>09_04_0494 +
18056679-18056819,18058307-18058374,18058708-18058811,
18058902-18058945
Length = 118
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 514 LSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPSAAPDNMLTSSPFAQTAH 672
+SS+P G AS A + PP A+G P+AAP P + H
Sbjct: 1 MSSSPWPPTTGAASAAAAAASPAPPEGAAGGAATPAAAPATTSEQRPVTKRIH 53
>06_03_0518 - 21685950-21686221,21686768-21686882
Length = 128
Score = 31.9 bits (69), Expect = 0.56
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Frame = +1
Query: 358 AGRNVSAGGLGIVV----GHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSA 525
AGR V A G G G RP + + R R G+P E+ S+
Sbjct: 3 AGRRVLAAGAGCACLRASGRPGAVRPRRRELGLGKVDLARRRRQGLPLIITIAFIEMGSS 62
Query: 526 PSLRRRGVASGARSLQPSRP-PRRASGDTRPPSAAPDNMLTS 648
P++ V + +++ P P G PP D L S
Sbjct: 63 PTIATATVPTPTTAIRAKSPTPEEMGGRRGPPKRGWDAALPS 104
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 351 GKSRQECIGRWAGYCRGPHTHCA-TCDNGRPQGCTFHHEGTNDWYTQ*ISLHLHRTEFCA 527
G+S EC RW + +H A T + T +G N+W ++L HRT F
Sbjct: 369 GRSGAECESRWLNFDDPLISHNAWTAREEKRLILTVQQQGMNNWINIAVTLGTHRTPFQC 428
Query: 528 IPPSARS 548
+ RS
Sbjct: 429 LVRYQRS 435
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 293 GWTDTKNEHVNAENQIELLQFCRRD 219
G+T T ++ N+ N E+L+FCRR+
Sbjct: 101 GFTSTSSDRSNSGNSSEMLRFCRRE 125
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 478 GIPSKSACICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPSAAP 630
G S SA CT S+ +L R + R+L+ S P RA + PP+AAP
Sbjct: 588 GASSPSAVPCT---SSVTLALRALTPHLRALRVSVPRPRAPSASAPPAAAP 635
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 526 PSLRRRGVASGARSLQPSRPPRRASGDTRPPSAAPDNMLTSSPFA 660
P LR RG +SG + + PP +S + PP A +L P A
Sbjct: 39 PHLRNRGASSGGGA---AAPPPSSSSSSAPPPRAAPGLLAPRPAA 80
>10_08_0042 -
14383143-14383628,14383647-14384609,14384697-14386443,
14387901-14388010,14388767-14389003
Length = 1180
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 499 CICTEL--SSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPSAAP 630
C C+ + S PS R GV+S L PSRP +R G R AP
Sbjct: 140 CCCSGVLGGSPPSSRTAGVSSPG--LSPSRPSKRRIGRARVQPRAP 183
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 373 SAGGLGIVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICT---ELSSAPSLRRR 543
+A ++ + +R A ++A RA S +PS S C S+A +LR R
Sbjct: 3 AAASSSLLAAASSSSRAAAVSARRAP-SASPAAAASLPSPSRASCAPPLRASAARTLRSR 61
Query: 544 GVASGARSLQPSRPPRRAS 600
VAS A ++QP P R S
Sbjct: 62 VVASAAPAMQPP-PASRVS 79
>08_01_0525 +
4564885-4565221,4565337-4565476,4565582-4565677,
4566079-4566146,4566542-4566643,4567492-4567630,
4567758-4567898,4568241-4568297,4568400-4568459,
4568866-4568973,4569834-4569994,4570453-4570531,
4571357-4571490,4571846-4571951,4572244-4572432,
4572595-4572822,4573028-4573183,4573491-4573532,
4573752-4573868,4573945-4574121
Length = 878
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -2
Query: 600 RRAPWRTRWLQTARP*GNSSPTEGWRRTQFCADAG*FTGYTSHSSPHDGKYSPGGGHC 427
R PW ++P + P R+ AD TG + S H PGG HC
Sbjct: 10 RGRPWHVLPSSPSQPPSSPPPRASADRSSAAADLDLGTGRSGEHSVHRVFLDPGGKHC 67
>12_02_0625 -
21331209-21331273,21331364-21331555,21332348-21332558,
21333600-21333700,21333839-21333844,21333956-21334051,
21334485-21334497
Length = 227
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 512 SVQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTIPSPPAD 372
S +QADLLG PVIRP + AG ++ PP D
Sbjct: 38 SAHLQADLLGSPVIRPSEPLELQKQLELAAGIWIKAVDPAFGLPPVD 84
>05_05_0142 - 22673607-22674134
Length = 175
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Frame = -3
Query: 629 GAALGGRVSPDARRGGR--------DGCRLRAPEATPRRRRDGAELSSVQMQADLLGIPV 474
G+A+ G V+PD GGR DG R R P R G S+VQ+ A IP
Sbjct: 14 GSAVAGVVAPDVVLGGRGHGEDDSLDGRRCRPVSWIPVSGRSGRRWSTVQLSAS--WIPT 71
Query: 473 IRPLMMESTALGAAIVAGRAMR 408
+ ++ + A +V G R
Sbjct: 72 SSWEVGDAARMTALMVGGAGRR 93
>03_05_0799 + 27809301-27811550
Length = 749
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 451 LSIMRGRMTGIPSKSACICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPS 621
L + G P SA E+++A L +S + + P PP SG+ PPS
Sbjct: 370 LYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGMPPS 426
>02_01_0593 +
4408229-4408294,4408764-4409096,4409756-4409794,
4409870-4409937,4410024-4410068,4410478-4410655,
4410740-4410871,4410941-4411009,4411258-4411305,
4411498-4411545,4411654-4411763,4412044-4412125,
4412232-4412345
Length = 443
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 493 SACICTELSSAPSLRRRGVASGARSL-QPSRPPRRASGDTRPPSAAPDN 636
S + + SS P R+ A +R+ QP P R RPP+ AP N
Sbjct: 140 SGALSSLTSSTPLTRQETPADASRAAPQPLVAPTRTPQPERPPAEAPSN 188
>05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 365 GMYRPVGWVLSWATHALRDLRQWPPPGL 448
G PVGW L + T L D PPP L
Sbjct: 926 GNNNPVGWPLRFLTPVLSDENSVPPPSL 953
>03_02_0175 + 6146637-6146909
Length = 90
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 629 GAALGGRVSPDARRGGRDGCRLRAPEATPRRR 534
GAA+G + RRGG+ G + A EA R+R
Sbjct: 18 GAAMGAPAVEERRRGGKHGDGVPAVEARQRKR 49
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 514 LSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPSAAPDNM---LTSSPFAQTAHHSP 681
LSSA +R + + S +QPS + +S T+P S P NM ++SSPF+ T P
Sbjct: 2442 LSSA--VRPQVLHSSGPYVQPSLVVQPSSQATQPQSILPGNMYRAMSSSPFSSTPMPMP 2498
>09_01_0117 +
1808669-1809181,1810038-1810059,1810170-1810223,
1810684-1810892
Length = 265
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 539 RRRDGAELSSVQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTIPSPPADTFLP 360
RRR + L + A G P+ + AA++ G A T+ P PP+ T P
Sbjct: 98 RRRHSSHLFAAPRHASTAGAPIATLRYSAVLGIEAAVLVGTARD--STSSPIPPSSTGAP 155
Query: 359 AL 354
+L
Sbjct: 156 SL 157
>04_04_1220 + 31843628-31844755
Length = 375
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 441 GGGHCRRSRNACVAHDNTQPT 379
GGGH R R +CV D+ +P+
Sbjct: 231 GGGHMRERRTSCVVVDDMEPS 251
>01_06_0049 - 25953811-25954131,25954223-25954903
Length = 333
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 502 ICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPSA 624
I +S L ++ A+ A S P+R PR +S T PP++
Sbjct: 187 ISVRSTSYLKLNQQSQAATATSAAPNRKPRTSSNPTNPPNS 227
>01_01_0937 -
7388230-7388283,7388957-7389091,7389201-7389365,
7389436-7389516,7389692-7389767,7389855-7389988,
7390082-7390174,7390885-7391018,7391125-7391533,
7392381-7392593
Length = 497
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/94 (26%), Positives = 33/94 (35%)
Frame = +1
Query: 367 NVSAGGLGIVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRG 546
NV+AGG A AAP S+ GR G SA AP++ R
Sbjct: 57 NVAAGGGAPGKAGNAKLNLAASAAPVKKGSLASGRNVGTNRASAVKSASAKPAPAISRHE 116
Query: 547 VASGARSLQPSRPPRRASGDTRPPSAAPDNMLTS 648
A+ S+ P + P P P + S
Sbjct: 117 SATQKESVLPPKVPSIVPTAALAPVTVPCSSFVS 150
>10_08_0270 + 16378878-16380566
Length = 562
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/73 (31%), Positives = 30/73 (41%)
Frame = +1
Query: 424 ATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRGVASGARSLQPSRPPRRASG 603
A A P + SI +T + SAC E PS + AS R Q S + G
Sbjct: 348 AGAARPGSAKSIRSELITQCRASSACSLMECRDGPSNKCGSAASYMRLFQSSTFCLQPQG 407
Query: 604 DTRPPSAAPDNML 642
D+ +A D ML
Sbjct: 408 DSYTRKSAFDAML 420
>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
Length = 360
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -3
Query: 581 RDGCRLRAPEATPRRRRDGAELSSVQMQADLLGIPVI----RPLMMESTALGAAIVAGRA 414
+ CR R RRRR A + + A G+PV+ P + +++ GA + A
Sbjct: 165 KKSCRRRLAGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSLLSSA 224
Query: 413 MRVWPTTIPSP 381
P +P+P
Sbjct: 225 RATGPWLMPTP 235
>03_05_0355 - 23420410-23420548,23420643-23420794
Length = 96
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 415 ARPATMAAPRAVLSIMRGRMTGIPSKSACICTELS 519
ARP AA + + R+TG PS S C ELS
Sbjct: 50 ARPMAAAAMMGSPAAVAARLTGHPSASVRACCELS 84
>02_05_0921 +
32739495-32739696,32739815-32740002,32740132-32740330,
32740426-32740604,32740760-32740910,32741165-32741298,
32741436-32741615
Length = 410
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +1
Query: 526 PSLRRRGVASGARSLQPSRPPRRASGDTRPPSAAPDNMLT 645
PSLRRR A RS SR P + G P A D LT
Sbjct: 21 PSLRRRDSARSLRSTFLSRLPDKVRGGGDPERPAADVDLT 60
>02_01_0360 -
2594534-2594601,2594778-2594829,2594915-2595029,
2595124-2595212,2595326-2595391,2595468-2595657,
2595811-2596037,2596111-2596185,2596283-2596354,
2596507-2596577,2596848-2597036,2597186-2597298,
2598063-2598268
Length = 510
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 391 IVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRGVASGARS 567
+ V +A PA +AAP AVL+ + SA SS+P LRR GA S
Sbjct: 17 LFVARVALAAPAQLAAPLAVLAAAALAVELAVDASASASASASSSP-LRRFRTRPGASS 74
>01_01_0078 +
587975-588179,588506-588606,589087-589167,589240-590178,
590388-590542,590837-590902,590963-591023,591659-591853,
591939-592049,592116-592280
Length = 692
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 475 TGIPSKSACICTELSSAPS---LRRRGVASGARSLQPSRPPRRASGDTRPPSAAPDNMLT 645
+ +PS + + +LSS + L+R S QP P G + PPSA + L+
Sbjct: 140 SSLPSAGSAVLPDLSSQAAQYGLQRPSFQSNIPLYQPGSVPW---GSSAPPSAGNASGLS 196
Query: 646 SSPFAQTAHHSPGVFSP 696
P ++ PG P
Sbjct: 197 VPPMYWQGYYPPGGLPP 213
>10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998
Length = 473
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 641 SILSGAALGGRVSPDARRGGRDGCRLRAPEAT 546
S+L+GAA SP +RRGG +RAP AT
Sbjct: 103 SVLAGAASATTRSPSSRRGGGG---VRAPPAT 131
>09_02_0608 + 11194889-11195134,11195185-11195406
Length = 155
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 514 LSSAPSLRRRGVASGARSLQPSRPP---RRASGDTRPPSAA-PDNML-TSSPFAQTAHHS 678
L +AP R +SG R + P PP ++ +G T P A+ P N T +P Q S
Sbjct: 37 LGAAPPQRLPQTSSGQRRVTPMAPPQQRQQVNGGTAVPMASLPVNQAPTGAPLPQRRRTS 96
Query: 679 PG 684
G
Sbjct: 97 HG 98
>08_02_0980 +
23255992-23256408,23256480-23256517,23256606-23256654,
23256787-23256848,23256876-23256938,23256939-23257599
Length = 429
Score = 27.9 bits (59), Expect = 9.1
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +1
Query: 376 AGGLGIVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRGVAS 555
AG G+V+G + RP + P V R+ P +EL + + RR + +
Sbjct: 235 AGRRGVVIGGRVLPRPRSTPNPNLVAG---SRILPHPRS----ISELVAGDCVLRRELVT 287
Query: 556 GARSLQPS-----RPPRRASGDTRPPS 621
R +P R PRR+S PPS
Sbjct: 288 SGRVRRPCLNMRPRSPRRSSSPAPPPS 314
>08_02_0292 - 15420378-15421229
Length = 283
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 632 SGAALGGRVSPDARRGGRDGCRL-RAPEATPRRRRDGAE 519
SGA G R RR GR+ RA A PRR R GA+
Sbjct: 202 SGAGGGSRRRRTERRRGREQAEEGRAAVAAPRRSRAGAD 240
>05_07_0308 +
29115892-29116083,29116771-29116885,29116978-29117087,
29118225-29118350,29118450-29118570,29118665-29118749,
29118854-29118967,29119061-29119100,29119517-29119665,
29120223-29120412,29121674-29122228,29123588-29123815,
29123904-29124044,29124134-29124334,29124447-29124728
Length = 882
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 484 PSKSACICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRP 615
PS + SS+ ++R R S +RS P PP + T P
Sbjct: 81 PSGPEVRSSSFSSSENVRARSSGSSSRSAAPPPPPPQTDSATNP 124
>05_04_0031 + 17353292-17354353
Length = 353
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 484 PSKSACIC-TELSSAPSLRRRGVASGAR 564
PS++A I T + AP+ RRGVASG+R
Sbjct: 187 PSEAAQISNTAATPAPAAARRGVASGSR 214
>05_02_0160 -
7194699-7195019,7195207-7195368,7195806-7195953,
7196286-7196362,7196717-7196787,7196891-7196977,
7197662-7198201,7198430-7198439
Length = 471
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 568 LQPSRPPRRASGDTRPPSAAPDNMLTSS 651
+ PS PP A+ +PPS P M+ SS
Sbjct: 30 MHPSPPPAYANRPPQPPSTPPAAMINSS 57
>04_04_0555 -
26210346-26211458,26211530-26211719,26211826-26211960,
26212072-26212169,26212262-26212425,26213558-26214032
Length = 724
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 511 ELSSAPSLRRRGVASGARSLQPSRPPRRASGD 606
E+ A LRRRG SG R+ PSR A+ +
Sbjct: 22 EMVEASELRRRGKPSGDRATGPSRDGAAAAAE 53
>02_01_0382 - 2772378-2773544
Length = 388
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = +1
Query: 538 RRGVASGARSLQPSRPPRRASG--DTRPPSAA 627
++ +AS + S PSR PR ASG T PPS++
Sbjct: 5 KQPMASSSTSPSPSRLPRSASGKAPTSPPSSS 36
>01_06_0040 -
25874308-25874611,25875743-25875822,25876764-25876996,
25877285-25877354
Length = 228
Score = 27.9 bits (59), Expect = 9.1
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = -3
Query: 569 RLRAPEATPRRRRDGAELSSVQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTI 390
R R E + RR +L +M+ + L L E+ L + RAMRV P T+
Sbjct: 114 RPRQVEVWFQNRRARTKLKQTEMECEYLK-RCFGSLTEENRRLQREVEELRAMRVAPPTV 172
Query: 389 PSPPADTFLPA 357
SP LPA
Sbjct: 173 LSPHTRQPLPA 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,396,752
Number of Sequences: 37544
Number of extensions: 518590
Number of successful extensions: 2135
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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