Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30659.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    24   3.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   9.9  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   9.9  

>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 53  VEMQILTELSAPYWARATKEWWK 121
           + + +LT L+A YW R    +W+
Sbjct: 3   ISLLVLTLLAAVYWIRQRLAYWE 25


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 452 ACESDIYRSEHATLLSIWHSQWYTN 378
           A  + I R E A  L +W  +W  N
Sbjct: 863 ASRAVIRREERAVTLEVWQREWDAN 887


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 415  PCFPFGTPNGTQTYARKPIRPPASEVS 335
            P  P+G  NGT + A  P  P +  ++
Sbjct: 1120 PRTPYGLSNGTSSPALPPKSPTSQRIT 1146


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
 Frame = -1

Query: 493 VFWHTCRPTI-SGS*HVRVTSTGVNMQPCF-PFG--TPNGTQTYARKPIRPPASEVSRVT 326
           VFW    P I   S  + V     + Q C   FG  T NG Q   R   + P S + ++ 
Sbjct: 142 VFWEP--PAIYKSSCEMNVEYFPYDEQTCLMKFGSWTYNGAQVELRHLDQIPGSNLVQIG 199

Query: 325 WTXSRHSRE*YSCITEEWLVTSLPSPTNQQYF 230
              S    E Y  ++ EW +  +P+  N++Y+
Sbjct: 200 IDLS----EFY--LSVEWDILEVPASRNEEYY 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,400
Number of Sequences: 2352
Number of extensions: 15471
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)