Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30657.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 118 6e-26
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 118 7e-26
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 91 1e-17
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 87 2e-16
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 83 3e-15
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 82 8e-15
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 74 2e-12
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 71 1e-11
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 52 5e-06
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 52 7e-06
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 52 7e-06
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 48 9e-05
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 47 3e-04
UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing f... 37 0.29
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.51
UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole geno... 33 3.6
UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella a... 32 8.2
UniRef50_Q9XIG3 Cluster: T10P12.5 protein; n=1; Arabidopsis thal... 32 8.2
UniRef50_A0MEB1 Cluster: Putative uncharacterized protein; n=2; ... 32 8.2
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 118 bits (285), Expect = 6e-26
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +2
Query: 251 QKAISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 430
++AISKAL+A+YQKYVDE SK EIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKS
Sbjct: 87 RQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKS 146
Query: 431 YR 436
YR
Sbjct: 147 YR 148
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +3
Query: 108 RXLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRKLFQR 269
R L+ +EP L+YKL EPILLLGKE+F+ VDIR VKGGG+VAQ+YAIR+ +
Sbjct: 39 RPLENIEPLTLRYKLLEPILLLGKERFAGVDIRIRVKGGGNVAQIYAIRQAISK 92
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +1
Query: 1 ARRXXIQAVQVFGRKKTATAVAYXKRGHGMLTCKRR 108
A + IQ+VQV GRKKTATAVAY KRG+G+L R
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGR 39
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 118 bits (284), Expect = 7e-26
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = +2
Query: 251 QKAISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 430
+++ISKAL+A+YQKYVDEASK EIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS
Sbjct: 85 RQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKS 144
Query: 431 YR 436
YR
Sbjct: 145 YR 146
Score = 81.4 bits (192), Expect = 1e-14
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +3
Query: 108 RXLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRK 257
R L+++EPR LQYKL EP+LLLGKE+F+ VDIR VKGGGHVAQ+YAIR+
Sbjct: 37 RPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQ 86
Score = 45.6 bits (103), Expect = 6e-04
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYXKRGHGMLTCKRR 108
+Q+VQVFGRKKTATAVA+ KRG+G++ R
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGR 37
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 99.5 bits (237), Expect = 4e-20
Identities = 45/62 (72%), Positives = 54/62 (87%)
Frame = +2
Query: 251 QKAISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 430
++AI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQKS
Sbjct: 94 RQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKS 153
Query: 431 YR 436
YR
Sbjct: 154 YR 155
Score = 50.4 bits (115), Expect = 2e-05
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 156 EPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRK 257
EP+L++G +KF+ VDIR V GGGH +QVYAIR+
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQ 95
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 91.1 bits (216), Expect = 1e-17
Identities = 40/62 (64%), Positives = 51/62 (82%)
Frame = +2
Query: 251 QKAISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 430
++AI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKS
Sbjct: 82 RQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKS 141
Query: 431 YR 436
YR
Sbjct: 142 YR 143
Score = 67.7 bits (158), Expect = 1e-10
Identities = 29/48 (60%), Positives = 40/48 (83%)
Frame = +3
Query: 114 LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRK 257
+ LVEP +L++K+ EP+LL+G +KFS +DIR V GGGHV+QVYAIR+
Sbjct: 36 ITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQ 83
Score = 35.5 bits (78), Expect = 0.67
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 16 IQAVQVFGRKKTATAVAYXKRGHGML 93
+ +VQ FG+KK+ATAVA+ K G G++
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLI 29
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 87.4 bits (207), Expect = 2e-16
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = +2
Query: 251 QKAISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 430
++AI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFGG GARAR QKS
Sbjct: 138 RQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFGGHGARARRQKS 197
Query: 431 YR 436
YR
Sbjct: 198 YR 199
Score = 34.7 bits (76), Expect = 1.2
Identities = 12/26 (46%), Positives = 23/26 (88%)
Frame = +3
Query: 114 LDLVEPRLLQYKLQEPILLLGKEKFS 191
+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 35 ISLVQPEILRWKVFEPVLVVGEDKFS 60
Score = 34.3 bits (75), Expect = 1.5
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 22 AVQVFGRKKTATAVAYXKRGHGML 93
+V FG+KKTATAVA+ K G G++
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLI 28
Score = 32.3 bits (70), Expect = 6.2
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 189 SMVDIRXTVKGGGHVAQVYAIRK 257
S VDIR V GGG +Q+YAIR+
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQ 139
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 83.0 bits (196), Expect = 3e-15
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +2
Query: 257 AISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 436
A +KA++AFY Y DE K EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 86 AFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 81.8 bits (193), Expect = 8e-15
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +2
Query: 218 GWWSCSTSLRYQKAISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFG 397
G S + ++AI+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 398 GPGARARYQKSYR 436
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 37.5 bits (83), Expect = 0.17
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 114 LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRK 257
L + P L+ K+ E I ++G + +S + I V GGG V+Q YA R+
Sbjct: 42 LQQILPDTLRAKIMEAITVVGSKYYSRLRIDVAVHGGGQVSQAYAARQ 89
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 73.7 bits (173), Expect = 2e-12
Identities = 36/62 (58%), Positives = 48/62 (77%)
Frame = +2
Query: 251 QKAISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 430
++AIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKS
Sbjct: 100 RQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKS 156
Query: 431 YR 436
YR
Sbjct: 157 YR 158
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 114 LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRKLFQR 269
L LV P +L+ K+ EPI++LG+ F +D+ V GGGHV+Q+YA+R+ R
Sbjct: 54 LALVRPEILRTKVSEPIMILGESLFKGLDMNIKVAGGGHVSQIYAVRQAISR 105
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 70.9 bits (166), Expect = 1e-11
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = +2
Query: 212 SQGWWSCSTSLRYQKAISKALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKK 391
S+G S +++ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 392 FGGPGARARYQKSYR 436
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
Score = 39.1 bits (87), Expect = 0.054
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 114 LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRK 257
++LV P ++ K+ EP +LG + ++ KGGG V+Q+YAIR+
Sbjct: 32 INLVHPLDIKNKILEPFFILGSNERLNLNFDIFSKGGGKVSQIYAIRQ 79
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 52.4 bits (120), Expect = 5e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +3
Query: 84 WNADV*TARXLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAI 251
W V L++ EP QY+L +PIL LGKE+F+ V I V G G VAQ+YAI
Sbjct: 47 WLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFARVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 52.0 bits (119), Expect = 7e-06
Identities = 34/110 (30%), Positives = 46/110 (41%)
Frame = +3
Query: 114 LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRKLFQRL*SPSTRN 293
L+++ LQYKL E LLL KE+ + +DI VKG GHV Q+YA+ + + P
Sbjct: 50 LEMIRLLTLQYKLLELGLLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYPK 109
Query: 294 M*TKPQRXKSKTS*YNTIGVCWWLTXXXXXXXXXXXXXXXXDTRNLTVKP 443
+ T CWW T TRN + KP
Sbjct: 110 YVDEASEEIKDT----LTRPCWWFTPVAMNPRNLQALVPVLTTRNHSSKP 155
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 52.0 bits (119), Expect = 7e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +2
Query: 302 EASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 436
+ ++ +++ + +D+ L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 105 KTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 48.4 bits (110), Expect = 9e-05
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +2
Query: 290 KYVDEASKXEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 436
+ +D+ S+ +++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 104 RMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
Score = 40.3 bits (90), Expect = 0.023
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 114 LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIRKLFQR 269
L++ + + K+ EP+L+ G+ S+VDIR V+GGG + Q A+R R
Sbjct: 36 LEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVEGGGVMGQADAVRMAIAR 87
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 269 ALIAFYQKYVDEASKXEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 436
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
Score = 43.6 bits (98), Expect = 0.003
Identities = 17/49 (34%), Positives = 33/49 (67%)
Frame = +3
Query: 108 RXLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRXTVKGGGHVAQVYAIR 254
+ ++++EP + ++ + EP++L G+E ++ VDI V+GGG + Q A R
Sbjct: 31 KPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAAR 79
>UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing family
M member 1; n=30; Eutheria|Rep: Pleckstrin homology
domain-containing family M member 1 - Homo sapiens
(Human)
Length = 1058
Score = 36.7 bits (81), Expect = 0.29
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = -3
Query: 302 RLHISGRRRSEPLK*LSDSVNLCYMTTTLDCXSDVNHREFFLAEQKDRFLKFVLQQ 135
R+H+ GRRR E LK L D + LC + +NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 35.9 bits (79), Expect = 0.51
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 25 VQVFGRKKTATAVAYXKRGHGMLTCKR 105
VQ FGRKKTA AV+Y K G G++ R
Sbjct: 13 VQCFGRKKTAVAVSYCKPGRGLIKVVR 39
>UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 651
Score = 33.1 bits (72), Expect = 3.6
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 112 HWTWLSPDC--CSTNFRNLSFCSARKNSLWLTSXXQSRV 222
H T L DC C N LS C R +LW TS S++
Sbjct: 182 HLTSLQKDCFACMPNLMRLSMCETRVANLWTTSAVLSKI 220
>UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Polyketide synthase -
Stigmatella aurantiaca DW4/3-1
Length = 535
Score = 31.9 bits (69), Expect = 8.2
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 347 RSLLVADPRRCEPKKFGGPGARARY 421
RSLL P EP+ + GPGAR RY
Sbjct: 229 RSLLTEAPAPAEPEPWTGPGARVRY 253
>UniRef50_Q9XIG3 Cluster: T10P12.5 protein; n=1; Arabidopsis
thaliana|Rep: T10P12.5 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 355
Score = 31.9 bits (69), Expect = 8.2
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 378 QRRGSATSKLLSYCTRMSLISXFEASSTYFW*KAIR 271
+R S T + LSYC R+ LI S T FW A R
Sbjct: 40 KRISSWTGRFLSYCGRLQLIKSVLMSITNFWSSAFR 75
>UniRef50_A0MEB1 Cluster: Putative uncharacterized protein; n=2;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 349
Score = 31.9 bits (69), Expect = 8.2
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 378 QRRGSATSKLLSYCTRMSLISXFEASSTYFW*KAIR 271
+R S T + LSYC R+ LI S T FW A R
Sbjct: 19 KRISSWTGRFLSYCGRLQLIKSVLMSITNFWSSAFR 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,370,260
Number of Sequences: 1657284
Number of extensions: 8429196
Number of successful extensions: 19241
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 18798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19240
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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