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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30656.Seq
         (511 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Simi...   116   9e-27
At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Simi...   116   9e-27
At1g57860.1 68414.m06565 60S ribosomal protein L21 similar to 60...   114   3e-26
At1g57660.1 68414.m06543 60S ribosomal protein L21 (RPL21E) simi...   114   3e-26
At1g62330.1 68414.m07033 expressed protein contains Pfam PF03138...    37   0.007
At3g45880.1 68416.m04965 hypothetical protein                          29   1.4  
At1g54926.1 68414.m06272 hypothetical protein                          29   1.4  
At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transfera...    29   1.8  
At4g24350.1 68417.m03494 phosphorylase family protein contains P...    29   1.8  
At5g25320.1 68418.m03004 ACT domain-containing protein contains ...    28   3.2  
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa...    28   3.2  
At2g13150.1 68415.m01450 expressed protein contains a bZIP trans...    28   3.2  
At4g31490.1 68417.m04473 coatomer beta subunit, putative / beta-...    28   4.2  
At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative...    28   4.2  
At5g41220.1 68418.m05009 glutathione S-transferase, putative sim...    27   5.5  
At1g04680.1 68414.m00465 pectate lyase family protein similar to...    27   5.5  
At5g41240.1 68418.m05011 glutathione S-transferase, putative sim...    27   7.3  
At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transfera...    27   7.3  
At1g76990.3 68414.m08966 ACT domain containing protein low simil...    27   7.3  
At1g76990.2 68414.m08965 ACT domain containing protein low simil...    27   7.3  
At1g76990.1 68414.m08964 ACT domain containing protein low simil...    27   7.3  
At5g63320.1 68418.m07946 expressed protein                             27   9.7  
At5g56080.1 68418.m06997 nicotianamine synthase, putative simila...    27   9.7  
At4g30860.1 68417.m04381 SET domain-containing protein low simil...    27   9.7  
At3g52020.1 68416.m05706 serine carboxypeptidase S10 family prot...    27   9.7  

>At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Similar
           to ribosomal protein L21 (gb|L38826). ESTs
           gb|AA395597,gb|ATTS5197 come from this gene
          Length = 164

 Score =  116 bits (279), Expect = 9e-27
 Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +3

Query: 15  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 194
           M    G R  TRDLFAR FR  G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 195 TGRVYNVTAHALGVIVNKRVAEGLYRS-ASISVLSMSSTPSADKTSLRESK 344
           TGR++NVT  A+GV VNK++   + R    + V  +  +  A++  LR+ K
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKK 111



 Score = 74.1 bits (174), Expect = 5e-14
 Identities = 36/76 (47%), Positives = 50/76 (65%)
 Frame = +2

Query: 260 RIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVS 439
           RII KRI++RVEHV+ S+C ++F  R K+N+ L   AKA G+T++ KRQP  PK   +V 
Sbjct: 83  RIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVE 142

Query: 440 GTEKPVLLAPIPYEFV 487
           G      + PIPY+ V
Sbjct: 143 GMTLET-VTPIPYDVV 157


>At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Similar
           to L21 family of ribosomal protein; amino acid sequence
           is identical to F21M12.8
          Length = 164

 Score =  116 bits (279), Expect = 9e-27
 Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +3

Query: 15  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 194
           M    G R  TRDLFAR FR  G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 195 TGRVYNVTAHALGVIVNKRVAEGLYRS-ASISVLSMSSTPSADKTSLRESK 344
           TGR++NVT  A+GV VNK++   + R    + V  +  +  A++  LR+ K
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKK 111



 Score = 74.1 bits (174), Expect = 5e-14
 Identities = 36/76 (47%), Positives = 50/76 (65%)
 Frame = +2

Query: 260 RIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVS 439
           RII KRI++RVEHV+ S+C ++F  R K+N+ L   AKA G+T++ KRQP  PK   +V 
Sbjct: 83  RIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVE 142

Query: 440 GTEKPVLLAPIPYEFV 487
           G      + PIPY+ V
Sbjct: 143 GMTLET-VTPIPYDVV 157


>At1g57860.1 68414.m06565 60S ribosomal protein L21 similar to 60S
           ribosomal protein L21 GI:3885884 from [Oryza sativa]
          Length = 164

 Score =  114 bits (275), Expect = 3e-26
 Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +3

Query: 15  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 194
           M    G R  TRDLFAR FR  G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 195 TGRVYNVTAHALGVIVNKRVAEGLYRS-ASISVLSMSSTPSADKTSLRESK 344
           TGR++NVT  A+GV VNK++   + R    + V  +  +  A++  LR+ +
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQ 111



 Score = 74.9 bits (176), Expect = 3e-14
 Identities = 36/76 (47%), Positives = 51/76 (67%)
 Frame = +2

Query: 260 RIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVS 439
           RII KRI++RVEHV+ S+C ++F  R K+N+ L  +AKA G+T++ KRQP  PK   +V 
Sbjct: 83  RIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPKGPKPGFMVE 142

Query: 440 GTEKPVLLAPIPYEFV 487
           G      + PIPY+ V
Sbjct: 143 GMTLET-VTPIPYDVV 157


>At1g57660.1 68414.m06543 60S ribosomal protein L21 (RPL21E) similar
           to 60S ribosomal protein L21 GB:Q43291 GI:2851508 from
           [Arabidopsis thaliana]
          Length = 164

 Score =  114 bits (275), Expect = 3e-26
 Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +3

Query: 15  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 194
           M    G R  TRDLFAR FR  G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 195 TGRVYNVTAHALGVIVNKRVAEGLYRS-ASISVLSMSSTPSADKTSLRESK 344
           TGR++NVT  A+GV VNK++   + R    + V  +  +  A++  LR+ +
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQ 111



 Score = 74.9 bits (176), Expect = 3e-14
 Identities = 36/76 (47%), Positives = 51/76 (67%)
 Frame = +2

Query: 260 RIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVS 439
           RII KRI++RVEHV+ S+C ++F  R K+N+ L  +AKA G+T++ KRQP  PK   +V 
Sbjct: 83  RIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPKGPKPGFMVE 142

Query: 440 GTEKPVLLAPIPYEFV 487
           G      + PIPY+ V
Sbjct: 143 GMTLET-VTPIPYDVV 157


>At1g62330.1 68414.m07033 expressed protein contains Pfam PF03138:
           Plant protein family. The function of this family of
           plant proteins is unknown;
          Length = 672

 Score = 37.1 bits (82), Expect = 0.007
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = +3

Query: 165 GMPHKVYHGKTGRVYNVTAHALGVIVNKRVAEGLYRSASISVLSMSSTPSADKTSLRESK 344
           G P K Y+G  GR+    AHAL    NK   + L+R      L+    P AD+ S + S 
Sbjct: 182 GKPKKTYNGTYGRLLAYAAHALAEGQNKLEPKELWREPKDQALAWK--PCADQRSWKPSD 239

Query: 345 RMRGY 359
              GY
Sbjct: 240 GKNGY 244


>At3g45880.1 68416.m04965 hypothetical protein
          Length = 431

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = -1

Query: 409 WLSLQVDGLAGSLGFLQ*PLILFDSLKEVLSALGVLDMLNTDIDALRYNPSATRL 245
           W  +Q D       FLQ  L    SL  VLS     D  ++D +  ++ PSAT L
Sbjct: 299 WYDMQFDIKYAYFNFLQSLLYKSSSLNPVLSWREDEDSESSDAEGSKFTPSATNL 353


>At1g54926.1 68414.m06272 hypothetical protein
          Length = 273

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 233 CDCQQACCGRIIPKRINIRVEHVKHSK 313
           CD  + C  R+ PK  +I  +H KH K
Sbjct: 59  CDLSEGCKNRMTPKAFHIISQHPKHHK 85


>At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 450

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = -3

Query: 248 LVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHVRGERN 87
           L  N   S    V     +  + FVW  LLN    SDV+ V   +H   R ERN
Sbjct: 346 LTHNGWNSTVESVFEGVPMICMPFVWDQLLNARFVSDVWMVG--LHLEGRIERN 397


>At4g24350.1 68417.m03494 phosphorylase family protein contains Pfam
           PF01048: Phosphorylase family
          Length = 336

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 140 DVYNVSNFVHFHVRGERNSSM 78
           DV+NV   VHF + G  N+SM
Sbjct: 114 DVFNVKGIVHFGIAGNMNNSM 134


>At5g25320.1 68418.m03004 ACT domain-containing protein contains
           Pfam ACT domain PF01842
          Length = 500

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 152 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 244
           C  +GY+  ++  KDR R+  D  C+  D Q
Sbjct: 291 CEERGYSIVTVKSKDRRRLMFDTICTLVDMQ 321


>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
            protein belongs to Pfam:PF03372:
            Endonuclease/Exonuclease/phosphatase family; contains 3
            WD-40 repeats (PF00400);similar to Type II
            inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
            (5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
          Length = 1305

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +2

Query: 275  RINIRVEHVKHSKCRQDFLKRVKENERL 358
            + ++++EHV  S  RQ+F + +K NE++
Sbjct: 920  KFHVKIEHVDRSVRRQEFGRIIKTNEKV 947


>At2g13150.1 68415.m01450 expressed protein contains a bZIP
           transcription factor basic domain signature (PDOC00036)
          Length = 262

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 294 SMSSTPSADKTSLRESKRMRGY*RKPRLPARPST*RDSQLPLKLPTSSVELRNPS 458
           S +STPS  ++  + S         P L   PS+ R + +PL  P++SVE R+ S
Sbjct: 4   SDNSTPSRPRSITQPSLAFSSL---PPLSPSPSSSRRNSIPLMNPSASVESRDSS 55


>At4g31490.1 68417.m04473 coatomer beta subunit, putative /
           beta-coat protein, putative / beta-COP, putative similar
           to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
           from {Rattus norvegicus} SP|P23514, {Mus musculus}
           SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
           profile: PF01602 Adaptin N terminal region
          Length = 948

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 254 CGRIIPKRINIRVEHVKHSKCRQDFLKRVKENE-RLLKEAKAAGKTVN 394
           C +++  R N+ ++ +    CRQ F+K + E + R ++E KA  +T +
Sbjct: 620 CIKLLCHR-NVEMKKIWLESCRQSFVKMISEKQLREMEELKAKTQTTH 666


>At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative /
           adrenodoxin reductase, putative strong similarity to
           Ferredoxin--NADP reductase, chloroplast precursor (EC
           1.18.1.2) (FNR) from {Pisum sativum} SP|P10933,
           {Mesembryanthemum crystallinum} SP|P41343, {Spinacia
           oleracea} SP|P00455, [Capsicum annuum] GI:6899972
          Length = 369

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 114 YKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVN 245
           Y+ G  V +  +G  + G PHKV      R+Y++ + ALG + N
Sbjct: 125 YREGQSVGVIADGIDKNGKPHKV------RLYSIASSALGDLGN 162


>At5g41220.1 68418.m05009 glutathione S-transferase, putative
           similar to emb|CAA10662
          Length = 590

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 74  HTWNYSALHVHESVQSWRHCRHQRQWCS 157
           +T NY +    E   +WR  RH ++WCS
Sbjct: 370 YTNNYKSNFTLE--HAWRELRHSKKWCS 395


>At1g04680.1 68414.m00465 pectate lyase family protein similar to
           pectate lyase GP:14531296 from [Fragaria x ananassa]
          Length = 431

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -3

Query: 191 SMVYFVWHTLLNCTIASDVYNVSNFVHFHVRGERNS-SMCAEPASEQVPGAAAVTLGVRH 15
           S  +F W T+      +D   +S F   HV  + NS S CA+   + V G+ A+T+   H
Sbjct: 216 SETHFGWRTM------ADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNH 269

Query: 14  L 12
           L
Sbjct: 270 L 270


>At5g41240.1 68418.m05011 glutathione S-transferase, putative
           similar to glutathione S-transferase, GST 10b
           GB:CAA10662 [Arabidopsis thaliana] 37349.
          Length = 591

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 119 SWRHCRHQRQWCSS 160
           +WR  RH ++WCS+
Sbjct: 385 AWRELRHNKKWCST 398


>At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 455

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 22/80 (27%), Positives = 31/80 (38%)
 Frame = -3

Query: 248 LVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHVRGERNSSMCAE 69
           L  N   S    V  A  +  + F W  +LN    SDV+ V   ++   R ERN    A 
Sbjct: 351 LTHNGWSSTVESVCEAVPMICLPFRWDQMLNARFVSDVWMVG--INLEDRVERNEIEGAI 408

Query: 68  PASEQVPGAAAVTLGVRHLR 9
                 P   A+   + HL+
Sbjct: 409 RRLLVEPEGEAIRERIEHLK 428


>At1g76990.3 68414.m08966 ACT domain containing protein low
           similarity to uridylyltransferase SP|P56884 from
           Rhizobium meliloti; contains Pfam ACT domain PF01842
          Length = 453

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 152 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 244
           C  KGY+  ++  +DR ++  D  C+  D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289


>At1g76990.2 68414.m08965 ACT domain containing protein low
           similarity to uridylyltransferase SP|P56884 from
           Rhizobium meliloti; contains Pfam ACT domain PF01842
          Length = 453

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 152 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 244
           C  KGY+  ++  +DR ++  D  C+  D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289


>At1g76990.1 68414.m08964 ACT domain containing protein low
           similarity to uridylyltransferase SP|P56884 from
           Rhizobium meliloti; contains Pfam ACT domain PF01842
          Length = 453

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 152 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 244
           C  KGY+  ++  +DR ++  D  C+  D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289


>At5g63320.1 68418.m07946 expressed protein
          Length = 569

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 317 RQDFLKRVKEN-ERLLKEAKAAGKTVNLKRQPAPPKA 424
           R++F KR++E  ERL  EAKAA +     +  A  KA
Sbjct: 103 REEFEKRLREEKERLQAEAKAAEEARRKAKAEAAEKA 139


>At5g56080.1 68418.m06997 nicotianamine synthase, putative similar
           to nicotianamine synthase [Lycopersicon
           esculentum][GI:4753801], nicotianamine synthase 2
           [Hordeum vulgare][GI:4894912]
          Length = 320

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = -3

Query: 263 SFRNTLVDNHTESMSSHVVHATCLSMVYFVWHT--LLNCTIASDVYNVSNFVHFHVRGER 90
           +F N  +D+H  +++S++V          ++HT  +LN     D Y+V  F+   V  ++
Sbjct: 151 TFHNFDIDSHANTLASNLVSRDSDLSKRMIFHTTDVLNAKEGLDQYDVV-FLAALVGMDK 209

Query: 89  NSSMCAEPASEQ--VPGAAAVTLGVRHLRA 6
            S + A    E+   PGA  +      LRA
Sbjct: 210 ESKVKAIEHLEKHMAPGAVVMLRSAHGLRA 239


>At4g30860.1 68417.m04381 SET domain-containing protein low
           similarity to IL-5 promoter REII-region-binding protein
           [Homo sapiens] GI:12642795; contains Pfam profile
           PF00856: SET domain
          Length = 497

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 194 DRSRVQR-DC-SCSR-CDCQQACCGRIIPKRINIRVEHVKH 307
           DRS V R  C SCS+ C C ++C  R   K   I++   +H
Sbjct: 295 DRSCVCRVQCISCSKGCSCPESCGNRPFRKEKKIKIVKTEH 335


>At3g52020.1 68416.m05706 serine carboxypeptidase S10 family protein
           similar to SP|P52711 Serine carboxypeptidase II-3
           precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam
           profile PF0450 serine carboxypeptidase
          Length = 501

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 477 YGIGASKTGFSVPLTMWAALGGAGC 403
           Y + A+KT  S+PL +W   GG GC
Sbjct: 111 YFVEATKTKKSLPLVLWLN-GGPGC 134


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,271,268
Number of Sequences: 28952
Number of extensions: 232769
Number of successful extensions: 793
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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