Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30653.Seq
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 164 6e-41
03_01_0547 + 4093196-4093657,4094267-4095148 164 6e-41
03_01_0544 + 4082528-4082989,4083585-4084466 164 6e-41
03_01_0543 + 4076981-4077442,4078145-4079026 164 6e-41
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 104 9e-23
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 101 7e-22
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 99 2e-21
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 99 2e-21
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 96 3e-20
02_04_0462 + 23131433-23132836 68 8e-12
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 68 1e-11
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 38 0.007
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 36 0.037
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 32 0.46
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 32 0.46
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 32 0.46
03_05_0511 + 25056018-25059107 32 0.61
02_04_0148 - 20198407-20201424 31 0.80
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.80
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 31 1.1
04_01_0103 + 1082077-1082167,1083037-1085477 31 1.1
02_04_0017 + 18937774-18937864,18938505-18940945 31 1.1
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 1.4
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 1.9
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.9
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 2.5
01_06_0662 + 30987187-30987277,30987825-30990214 30 2.5
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 3.2
09_06_0237 + 21788886-21789965 29 4.3
04_04_0689 - 27292271-27292709,27293717-27293856,27294572-272946... 29 4.3
03_06_0651 + 35297560-35297895,35298881-35298991,35299670-352997... 29 4.3
01_01_0016 - 88825-90411 29 4.3
12_01_1019 - 10398880-10399314,10399401-10399481,10399560-103996... 28 7.5
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 28 7.5
04_04_0024 - 22216105-22217856 28 7.5
04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800 28 7.5
02_02_0554 - 11434744-11435364,11435741-11436442 28 7.5
02_02_0302 + 8762930-8763002,8763296-8763454,8764035-8764121,876... 28 7.5
10_01_0204 + 2199778-2200835,2201212-2201311 28 9.9
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 9.9
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 9.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 164 bits (399), Expect = 6e-41
Identities = 100/181 (55%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSR--RKYPHTSRRLATTQLLSLS 610
TREHALLAFTLGVKQ+I NKMD +P K+R S L
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMD-----ATTPKYSKARYDEIVKEVSSYLKKVGYNPDK 187
Query: 611 CPF--LDGTE-TTCWEPSTKMPWFKGWQWSVRKAKLTGKCLIEALDAILPLARPXDKPLR 781
PF + G E E ST + W+K G L+EALD I RP DKPLR
Sbjct: 188 IPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLR 235
Query: 782 L 784
L
Sbjct: 236 L 236
Score = 132 bits (320), Expect = 2e-31
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 164 bits (399), Expect = 6e-41
Identities = 100/181 (55%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSR--RKYPHTSRRLATTQLLSLS 610
TREHALLAFTLGVKQ+I NKMD +P K+R S L
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMD-----ATTPKYSKARYDEIVKEVSSYLKKVGYNPDK 187
Query: 611 CPF--LDGTE-TTCWEPSTKMPWFKGWQWSVRKAKLTGKCLIEALDAILPLARPXDKPLR 781
PF + G E E ST + W+K G L+EALD I RP DKPLR
Sbjct: 188 IPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLR 235
Query: 782 L 784
L
Sbjct: 236 L 236
Score = 132 bits (320), Expect = 2e-31
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 164 bits (399), Expect = 6e-41
Identities = 100/181 (55%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSR--RKYPHTSRRLATTQLLSLS 610
TREHALLAFTLGVKQ+I NKMD +P K+R S L
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMD-----ATTPKYSKARYDEIVKEVSSYLKKVGYNPDK 187
Query: 611 CPF--LDGTE-TTCWEPSTKMPWFKGWQWSVRKAKLTGKCLIEALDAILPLARPXDKPLR 781
PF + G E E ST + W+K G L+EALD I RP DKPLR
Sbjct: 188 IPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLR 235
Query: 782 L 784
L
Sbjct: 236 L 236
Score = 132 bits (320), Expect = 2e-31
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 164 bits (399), Expect = 6e-41
Identities = 100/181 (55%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSR--RKYPHTSRRLATTQLLSLS 610
TREHALLAFTLGVKQ+I NKMD +P K+R S L
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMD-----ATTPKYSKARYDEIVKEVSSYLKKVGYNPDK 187
Query: 611 CPF--LDGTE-TTCWEPSTKMPWFKGWQWSVRKAKLTGKCLIEALDAILPLARPXDKPLR 781
PF + G E E ST + W+K G L+EALD I RP DKPLR
Sbjct: 188 IPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLR 235
Query: 782 L 784
L
Sbjct: 236 L 236
Score = 132 bits (320), Expect = 2e-31
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 104 bits (249), Expect = 9e-23
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 6/175 (3%)
Frame = +2
Query: 278 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHA 451
F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+
Sbjct: 307 FDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHS 366
Query: 452 LLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDGT 631
L + GV LIV VNKMD + + S+ ++ +L SC + D
Sbjct: 367 QLVRSFGVDNLIVVVNKMDSVEY---------SKERFNFIKSQLGA---FLRSCGYKD-- 412
Query: 632 ETTCWEPSTKMPWFKGWQWSVRKAKLT----GKCLIEALDAILPLARPXDKPLRL 784
W P + M + + +L+ G CL++A+D + P +R KPLRL
Sbjct: 413 SAVAWVPISAME-NENLMTTASDTRLSSWYDGNCLLKAIDTLPPPSRDVSKPLRL 466
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +1
Query: 523 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 645
YS+ RF IK ++ ++++ GY +AVA+VPIS +N++
Sbjct: 389 YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLM 429
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 187 MGKGSFKYAWVLDKLKAERE 246
+GKGSF YAW +D+ ERE
Sbjct: 276 IGKGSFAYAWAMDESADERE 295
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 101 bits (242), Expect = 7e-22
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQ
Sbjct: 19 VEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 78
Query: 437 TREHALLAFTLGVKQLIVGVNKMD 508
TREH LLA TLGV +L+V +NKMD
Sbjct: 79 TREHVLLAKTLGVSKLVVVINKMD 102
Score = 34.7 bits (76), Expect = 0.086
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 523 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNM 642
+S+ R++EI+ ++ ++K GYN V F+PISG G NM
Sbjct: 108 WSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNM 148
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 99 bits (238), Expect = 2e-21
Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Frame = +2
Query: 263 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN---- 430
+A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKS 374
Query: 431 -GQTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 607
GQT+EHA L + GV+QLIV VNKMD + + S+ ++ +L +
Sbjct: 375 VGQTKEHAQLIRSFGVEQLIVAVNKMDAIGY---------SKERFEFIKVQLGS---FLR 422
Query: 608 SCPFLDGTETTCWEPSTKMPWFKGWQWSVRKAKLT----GKCLIEALDAILPLARPXDKP 775
SC F D + T W P + + + +LT G CL++A+D++ +R KP
Sbjct: 423 SCNFKDSSVT--WIPLSAVE-NQNLIKIPSDVRLTSWYQGFCLLDAIDSLQLPSRDVSKP 479
Query: 776 LRL 784
L L
Sbjct: 480 LIL 482
Score = 79.0 bits (186), Expect = 4e-15
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +1
Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 238 ERE 246
ERE
Sbjct: 306 ERE 308
Score = 34.7 bits (76), Expect = 0.086
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 523 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 645
YS+ RFE IK ++ S+++ + ++V ++P+S N++
Sbjct: 405 YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLI 445
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 99 bits (238), Expect = 2e-21
Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Frame = +2
Query: 263 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN---- 430
+A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKS 374
Query: 431 -GQTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 607
GQT+EHA L + GV+QLIV VNKMD + + S+ ++ +L +
Sbjct: 375 VGQTKEHAQLIRSFGVEQLIVAVNKMDAIGY---------SKERFEFIKVQLGS---FLR 422
Query: 608 SCPFLDGTETTCWEPSTKMPWFKGWQWSVRKAKLT----GKCLIEALDAILPLARPXDKP 775
SC F D + T W P + + + +LT G CL++A+D++ +R KP
Sbjct: 423 SCNFKDSSVT--WIPLSAVE-NQNLIKIPSDVRLTSWYQGFCLLDAIDSLQLPSRDVSKP 479
Query: 776 LRL 784
L L
Sbjct: 480 LIL 482
Score = 79.0 bits (186), Expect = 4e-15
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +1
Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 238 ERE 246
ERE
Sbjct: 306 ERE 308
Score = 34.7 bits (76), Expect = 0.086
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 523 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 645
YS+ RFE IK ++ S+++ + ++V ++P+S N++
Sbjct: 405 YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLI 445
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 95.9 bits (228), Expect = 3e-20
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
+++ FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G
Sbjct: 60 VEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYE 119
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
K GQTREH LLA TLGV +LIV +NKMD
Sbjct: 120 KGGQTREHVLLAKTLGVAKLIVVINKMD 147
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +1
Query: 91 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 243
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 54
Score = 34.7 bits (76), Expect = 0.086
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 523 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNM 642
+S+ R++EI+ ++ +++ GYN V F+PISG G NM
Sbjct: 153 WSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLGSNM 193
>02_04_0462 + 23131433-23132836
Length = 467
Score = 68.1 bits (159), Expect = 8e-12
Identities = 34/87 (39%), Positives = 53/87 (60%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
I+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G Q
Sbjct: 121 INTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------Q 173
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLN 517
T+EH LLA +GV +++V +NK D ++
Sbjct: 174 TKEHILLAKQVGVPKIVVFLNKKDQVD 200
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 40 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 198
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 275 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 454
++ET+K + +D PGH D++KNMITG +Q D +L+V+A G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
Query: 455 LAFTLGVKQLIVGVNKMDPLN 517
LA +GV L+ +NK+D ++
Sbjct: 177 LARQVGVPSLVCFLNKVDAVD 197
Score = 34.7 bits (76), Expect = 0.086
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 198
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 233 RLSVSRYPIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 403
R+S+ P+ + L Y I+D PGH +F M AD AVL+V A G
Sbjct: 199 RVSIKAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +2
Query: 296 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 475
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRL 202
Query: 476 KQLIVGVNKMD 508
+ +I+ NK+D
Sbjct: 203 QHIIILQNKID 213
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 32.3 bits (70), Expect = 0.46
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 299 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 478
+T +D PGH F G + D VL+VAA G + + HA A
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTL----EAMSHAKAANV---- 298
Query: 479 QLIVGVNKMD 508
++V VNK D
Sbjct: 299 PIVVAVNKCD 308
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 32.3 bits (70), Expect = 0.46
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = +2
Query: 281 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 460
+ Y + +ID PGH DF + + A+L+V A G QT + LA
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG-------VQAQTIANFYLA 182
Query: 461 FTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRK 559
F + +I +NK+D T PD K++ K
Sbjct: 183 FESNL-SIIPVINKID---QPTADPDNVKAQLK 211
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 150
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 293 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 454
Y V IID PGH DF + D A+L++ + G I+ + Q R + +
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 299 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 403
V +ID+PGH DF + + +D A+++V A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.80
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 299 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 403
V +ID+PGH DF + AD A+++V A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 189
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 299 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 403
+ ++D PGH DF + + AVL+V AG G
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +2
Query: 305 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 484
+ID PGH F G S D AV++V + G+ K QT E L V+ +
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV-----DIMHGLEK--QTVETLALLKDRNVRFI 559
Query: 485 IVGVNKMDPLNHHTVSPD 538
+V +NK+D L PD
Sbjct: 560 VV-LNKVDRLCGWKHCPD 576
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 138
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 287 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 388
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 138
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 287 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 388
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 61 HINIVVIGHVDSGKSTTTGHLIYKCG 138
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 260 DIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 388
D AL FE + Y + +ID+PGH DF + D A+++V
Sbjct: 83 DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 305 IIDAPGHRDFIKNMITGTSQADCAVLIV 388
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 165
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 293 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 403
Y + +ID PGH DF + + + A+L+V A G
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 287 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 388
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 305 IIDAPGHRDFIKNMITGTSQADCAVLIV 388
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>09_06_0237 + 21788886-21789965
Length = 359
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Frame = +2
Query: 305 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF----EAGI-----SKNGQTREHALL 457
+I + F + ++ SQ DC +V G G F AG+ N A++
Sbjct: 261 VIRRSWNETFPRELVAAHSQYDCPGNLVYVGDGRFCICWVAGVEHDRPETNDMVARTAVV 320
Query: 458 AFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPH 568
+ +++ G ++ L +H +SP R++ PH
Sbjct: 321 TMAVRLRRSAGGELQLTKLRYHLMSPQGRRAYFVQPH 357
>04_04_0689 -
27292271-27292709,27293717-27293856,27294572-27294664,
27295614-27296012,27296258-27296392,27296482-27296835
Length = 519
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 239 SVSRYPIDIALWKFETSKYYVT 304
S SR P+D+A+ +F+ SKY+++
Sbjct: 299 SYSRGPVDLAIGEFDESKYFIS 320
>03_06_0651 +
35297560-35297895,35298881-35298991,35299670-35299744,
35300165-35300225,35300406-35300479,35300564-35300668,
35301099-35301206,35301604-35301707,35302005-35302223,
35302505-35302646,35302694-35302825,35302962-35303066
Length = 523
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 648 SQHVVSVPSRNGHESDSSWVVANLLDV*-GYFLLDFLKSGLTVWWFSGSILFT 493
S V+ P N + V L + GYF L + SGL+++W + +IL T
Sbjct: 282 SSQVMQPPQNNDPSQQGAQAVVKFLPLLIGYFALS-VPSGLSLYWLTNNILST 333
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 490 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 371
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>12_01_1019 -
10398880-10399314,10399401-10399481,10399560-10399652,
10399784-10399999,10403837-10403935,10404244-10404867,
10404946-10405033,10405167-10405430,10406437-10406504
Length = 655
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = -2
Query: 349 DHVLDEISVSRSINDGNIVLASFELPESNIDWIPTHAQPLVCPIPKHI 206
D VLD+ + +++ +++ ++ W P ++QP CP +H+
Sbjct: 327 DIVLDDTFEANTLSRDDVIPEILQMAPGQKVWPPRNSQPSNCPQTQHV 374
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 250 PTHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 152
PT PL+ P P + +L PF P+R+ WY
Sbjct: 41 PTTRAPLL-PSPPRLPPLLVPFAAVPARSFSWY 72
>04_04_0024 - 22216105-22217856
Length = 583
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = -3
Query: 744 MASRASMRHFPVSFA----FLTLHCHPLNQGILVEGSQHVVSVPSRNGHESDSSWVVANL 577
+A+ A++R P + + F LHC PL+ Q ++ V R+G ++D+ + +
Sbjct: 111 LAAAAALRLAPCASSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQM 170
Query: 576 LDV*GYF----LLDFLKSGLT 526
GY L FL S T
Sbjct: 171 TTHYGYSPDARFLSFLVSSCT 191
>04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800
Length = 456
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +1
Query: 553 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLGAFNQNALV 672
+E+++Y++++ +PA A+ W +LG + +N LV
Sbjct: 390 EELAAYVREVAGDPA--AYAEFHAWRRCGVLGGYGRNRLV 427
>02_02_0554 - 11434744-11435364,11435741-11436442
Length = 440
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 667 LVQGMAVERKEGKADGKMPH*SSRCHPATCPPIXQAPASF 786
L++ + KEG A+ P H T PPI +AP F
Sbjct: 321 LLRPLTTSEKEGAAESLSPPPMKVKHHLTPPPIVRAPGQF 360
>02_02_0302 +
8762930-8763002,8763296-8763454,8764035-8764121,
8764358-8764449,8764666-8764740,8764916-8765053
Length = 207
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 775 GLVXWAGKWQ-DGIESFNEAFSRQLCLPY 692
G+V WAG W+ G+ + + AF +L P+
Sbjct: 101 GVVIWAGTWRVGGVLAMSRAFGNRLLKPF 129
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 792 AGERRRGLSNGRASGRMASRASMRHFPVSFAFLTLH-CHP 676
A RRR + RA R+ SRA +R P S + +H CHP
Sbjct: 221 ARRRRRQSAIARAGARV-SRAGVRPSPASSILVGVHPCHP 259
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 55 KTHINIVVIGHVDSG 99
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 421 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 287
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,645,849
Number of Sequences: 37544
Number of extensions: 541678
Number of successful extensions: 1672
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1658
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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