Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30652.Seq
(518 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 134 2e-31
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 134 2e-31
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 134 2e-31
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 134 2e-31
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 134 2e-31
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 81 3e-15
BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology dom... 30 4.2
AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein. 30 4.2
AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens ... 30 4.2
AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein. 30 4.2
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 5.6
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 5.6
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 5.6
M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation fa... 29 9.8
BC150287-1|AAI50288.1| 1922|Homo sapiens Dicer1, Dcr-1 homolog (... 29 9.8
AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase K... 29 9.8
AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein. 29 9.8
AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein. 29 9.8
AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein. 29 9.8
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 134 bits (324), Expect = 2e-31
Identities = 58/77 (75%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VEIRVTVKGGGHVAQVY 254
V+IRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 123 bits (297), Expect = 3e-28
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYXDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKY DEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 134 bits (324), Expect = 2e-31
Identities = 58/77 (75%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VEIRVTVKGGGHVAQVY 254
V+IRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 134 bits (324), Expect = 2e-31
Identities = 58/77 (75%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VEIRVTVKGGGHVAQVY 254
V+IRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 123 bits (297), Expect = 3e-28
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYXDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKY DEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 134 bits (324), Expect = 2e-31
Identities = 58/77 (75%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VEIRVTVKGGGHVAQVY 254
V+IRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 123 bits (297), Expect = 3e-28
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYXDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKY DEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 134 bits (324), Expect = 2e-31
Identities = 58/77 (75%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VEIRVTVKGGGHVAQVY 254
V+IRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 123 bits (297), Expect = 3e-28
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYXDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKY DEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 80.6 bits (190), Expect = 3e-15
Identities = 48/145 (33%), Positives = 68/145 (46%)
Frame = +3
Query: 27 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 206
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 207 EIRVTVKGGGHVAQVYLSDKLFQRL*SPSTRNMXTKPQRRKSKTS*YNTIGVCWWLTXXX 386
+I V VKG GHV Q+Y + + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 387 XXXXXXXXXXXXXDTRNLTVKPSRK 461
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology domain
containing, family M (with RUN domain) member 1 protein.
Length = 1056
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = -1
Query: 311 RLHISGRRRSEPLK*LV**VNLCYMTTTLDCHSDFNHREFFLAEQKDRFLKFVLQQ 144
R+H+ GRRR E LK L + LC + NHR + L E RF LQQ
Sbjct: 914 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 967
>AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein.
Length = 628
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = -1
Query: 311 RLHISGRRRSEPLK*LV**VNLCYMTTTLDCHSDFNHREFFLAEQKDRFLKFVLQQ 144
R+H+ GRRR E LK L + LC + NHR + L E RF LQQ
Sbjct: 486 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 539
>AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens B2
gene partial cDNA, clone B2E. ).
Length = 926
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = -1
Query: 311 RLHISGRRRSEPLK*LV**VNLCYMTTTLDCHSDFNHREFFLAEQKDRFLKFVLQQ 144
R+H+ GRRR E LK L + LC + NHR + L E RF LQQ
Sbjct: 784 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 837
>AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein.
Length = 1058
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = -1
Query: 311 RLHISGRRRSEPLK*LV**VNLCYMTTTLDCHSDFNHREFFLAEQKDRFLKFVLQQ 144
R+H+ GRRR E LK L + LC + NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 5.6
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 314 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 397
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 5.6
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 314 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 397
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 5.6
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 314 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 397
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation
factor 1 protein.
Length = 372
Score = 29.1 bits (62), Expect = 9.8
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 338 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFKKTIGWYR 478
+LV D L +A PRR EP GGPG R ++ Y +F++ +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>BC150287-1|AAI50288.1| 1922|Homo sapiens Dicer1, Dcr-1 homolog
(Drosophila) protein.
Length = 1922
Score = 29.1 bits (62), Expect = 9.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -1
Query: 239 MTTTLDCHSDFNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGGG 60
+TT L +F R+ + E R +L + Q+ PVYT+ T++I G
Sbjct: 777 LTTPLPDELNFRRRKLYPPEDTTRCFG-ILTAKPIPQIPHFPVYTRSGEVTISIELKKSG 835
Query: 59 FLTS 48
F+ S
Sbjct: 836 FMLS 839
>AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase
K12H4.8-like protein protein.
Length = 1912
Score = 29.1 bits (62), Expect = 9.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -1
Query: 239 MTTTLDCHSDFNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGGG 60
+TT L +F R+ + E R +L + Q+ PVYT+ T++I G
Sbjct: 767 LTTPLPDELNFRRRKLYPPEDTTRCFG-ILTAKPIPQIPHFPVYTRSGEVTISIELKKSG 825
Query: 59 FLTS 48
F+ S
Sbjct: 826 FMLS 829
>AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein.
Length = 372
Score = 29.1 bits (62), Expect = 9.8
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 338 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFKKTIGWYR 478
+LV D L +A PRR EP GGPG R ++ Y +F++ +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein.
Length = 1924
Score = 29.1 bits (62), Expect = 9.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -1
Query: 239 MTTTLDCHSDFNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGGG 60
+TT L +F R+ + E R +L + Q+ PVYT+ T++I G
Sbjct: 779 LTTPLPDELNFRRRKLYPPEDTTRCFG-ILTAKPIPQIPHFPVYTRSGEVTISIELKKSG 837
Query: 59 FLTS 48
F+ S
Sbjct: 838 FMLS 841
>AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein.
Length = 1922
Score = 29.1 bits (62), Expect = 9.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -1
Query: 239 MTTTLDCHSDFNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGGG 60
+TT L +F R+ + E R +L + Q+ PVYT+ T++I G
Sbjct: 777 LTTPLPDELNFRRRKLYPPEDTTRCFG-ILTAKPIPQIPHFPVYTRSGEVTISIELKKSG 835
Query: 59 FLTS 48
F+ S
Sbjct: 836 FMLS 839
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,519,832
Number of Sequences: 237096
Number of extensions: 1881634
Number of successful extensions: 4271
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4258
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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