Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30650.Seq
(748 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 2.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.6
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 4.5
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 4.5
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 4.5
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 384 NGRQYDIPGSLEEETGHH 437
N YD+ GS + TGHH
Sbjct: 203 NVMAYDLRGSWDGVTGHH 220
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 386 IASAVSLLTSSPFPQ--NLASSSMPSSCMTVESTSKQTQSAVLNNSGQS 246
+ S +S+ TS P + AS ++ S + STS ++ NN+ +S
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 386 IASAVSLLTSSPFPQ--NLASSSMPSSCMTVESTSKQTQSAVLNNSGQS 246
+ S +S+ TS P + AS ++ S + STS ++ NN+ +S
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 386 IASAVSLLTSSPFPQ--NLASSSMPSSCMTVESTSKQTQSAVLNNSGQS 246
+ S +S+ TS P + AS ++ S + STS ++ NN+ +S
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 386 IASAVSLLTSSPFPQ--NLASSSMPSSCMTVESTSKQTQSAVLNNSGQS 246
+ S +S+ TS P + AS ++ S + STS ++ NN+ +S
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 386 IASAVSLLTSSPFPQ--NLASSSMPSSCMTVESTSKQTQSAVLNNSGQS 246
+ S +S+ TS P + AS ++ S + STS ++ NN+ +S
Sbjct: 99 LTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 147
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 386 IASAVSLLTSSPFPQ--NLASSSMPSSCMTVESTSKQTQSAVLNNSGQS 246
+ S +S+ TS P + AS ++ S + STS ++ NN+ +S
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 386 IASAVSLLTSSPFPQ--NLASSSMPSSCMTVESTSKQTQSAVLNNSGQS 246
+ S +S+ TS P + AS ++ S + STS ++ NN+ +S
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 396 YDIPGSLEEETGHH 437
YD G E ETGH+
Sbjct: 279 YDFHGKWERETGHN 292
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +1
Query: 109 SEFDHNSFVTRRRSNRDGSLQFEKQPAVR 195
S+ DH + + ++N+DG+ +K+P ++
Sbjct: 452 SQVDHKNNLGDSKNNQDGNNGEKKKPHIK 480
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +1
Query: 109 SEFDHNSFVTRRRSNRDGSLQFEKQPAVR 195
S+ DH + + ++N+DG+ +K+P ++
Sbjct: 344 SQVDHKNNLGDSKNNQDGNNGEKKKPHIK 372
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,228
Number of Sequences: 336
Number of extensions: 3239
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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