Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30649.Seq
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   3.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.9  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.9  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.9  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.9  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 123 KSNGRPVYTQHSMTTLAIRN 64
           KS  +P Y+ +++  +AIRN
Sbjct: 79  KSKEKPPYSYNALIMMAIRN 98


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 262 ISKALIAFYQKYVDEASKKEIKDI 333
           I K +IAFY K +   +  EIK I
Sbjct: 126 IVKPIIAFYYKPIKTLNGHEIKFI 149


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 14  SPSRPSKYSDVRKPPP 61
           SP  P +  DV+ PPP
Sbjct: 723 SPLTPHEAFDVKLPPP 738


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 14  SPSRPSKYSDVRKPPP 61
           SP  P +  DV+ PPP
Sbjct: 615 SPLTPHEAFDVKLPPP 630


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 123  KSNGRPVYTQHSMTTLAIRNCGGGFLTSE 37
            K +    YTQ+S+   A    G G L+ +
Sbjct: 1062 KISNLKTYTQYSVVVQAFNKVGAGPLSDD 1090


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 452 KPSGGIVAASCCHCDIIGWV 511
           K  G I A   CH D IG++
Sbjct: 411 KRIGNIKAPGVCHGDDIGYL 430


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 452 KPSGGIVAASCCHCDIIGWV 511
           K  G I A   CH D IG++
Sbjct: 413 KRIGNIKAPGVCHGDDIGYL 432


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 452 KPSGGIVAASCCHCDIIGWV 511
           K  G I A   CH D IG++
Sbjct: 411 KRIGNIKAPGVCHGDDIGYL 430


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 452 KPSGGIVAASCCHCDIIGWV 511
           K  G I A   CH D IG++
Sbjct: 413 KRIGNIKAPGVCHGDDIGYL 432


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 14  SPSRPSKYSDVRKPPPQLRIASV 82
           SP+R     + + P PQ R  SV
Sbjct: 684 SPTRDKSKQNEKSPSPQQRSPSV 706


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,962
Number of Sequences: 336
Number of extensions: 2543
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)