Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30649.Seq
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 165 6e-41
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 165 6e-41
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 165 6e-41
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 165 6e-41
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 78 2e-14
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 56 1e-07
BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology dom... 35 0.20
AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein. 35 0.20
AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens ... 35 0.20
AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein. 35 0.20
Y17931-1|CAA76948.1| 115|Homo sapiens immunoglobulin heavy chai... 31 3.3
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 5.8
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 5.8
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 5.8
AK090419-1|BAC03400.1| 266|Homo sapiens FLJ00327 protein protein. 30 5.8
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 165 bits (402), Expect = 6e-41
Identities = 85/143 (59%), Positives = 103/143 (72%), Gaps = 2/143 (1%)
Frame = +1
Query: 16 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGPPIGLG*XQTAAVQTSGTYPFARQGKILY 195
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNG P+ + + +Q P GK +
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEM--IEPRTLQYKLLEPVLLLGKERF 63
Query: 196 G*XXXXXXXXXXXXXXLRY--QQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 369
Y +Q+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVAD
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123
Query: 370 PRRCEPKKFGGPGARARYQKSYR 438
PRRCE KKFGGPGARARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 165 bits (402), Expect = 6e-41
Identities = 85/143 (59%), Positives = 103/143 (72%), Gaps = 2/143 (1%)
Frame = +1
Query: 16 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGPPIGLG*XQTAAVQTSGTYPFARQGKILY 195
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNG P+ + + +Q P GK +
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEM--IEPRTLQYKLLEPVLLLGKERF 63
Query: 196 G*XXXXXXXXXXXXXXLRY--QQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 369
Y +Q+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVAD
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123
Query: 370 PRRCEPKKFGGPGARARYQKSYR 438
PRRCE KKFGGPGARARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 165 bits (402), Expect = 6e-41
Identities = 85/143 (59%), Positives = 103/143 (72%), Gaps = 2/143 (1%)
Frame = +1
Query: 16 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGPPIGLG*XQTAAVQTSGTYPFARQGKILY 195
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNG P+ + + +Q P GK +
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEM--IEPRTLQYKLLEPVLLLGKERF 63
Query: 196 G*XXXXXXXXXXXXXXLRY--QQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 369
Y +Q+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVAD
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123
Query: 370 PRRCEPKKFGGPGARARYQKSYR 438
PRRCE KKFGGPGARARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 165 bits (402), Expect = 6e-41
Identities = 85/143 (59%), Positives = 103/143 (72%), Gaps = 2/143 (1%)
Frame = +1
Query: 16 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGPPIGLG*XQTAAVQTSGTYPFARQGKILY 195
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNG P+ + + +Q P GK +
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEM--IEPRTLQYKLLEPVLLLGKERF 63
Query: 196 G*XXXXXXXXXXXXXXLRY--QQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 369
Y +Q+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVAD
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123
Query: 370 PRRCEPKKFGGPGARARYQKSYR 438
PRRCE KKFGGPGARARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 78.2 bits (184), Expect = 2e-14
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = +2
Query: 107 GRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRVTVKGGGHVAQVY 247
GRPL+++ PR LQYKL EP+LLLGKE+F+ V IRV VKGGGHVAQ+Y
Sbjct: 36 GRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIY 82
Score = 62.1 bits (144), Expect = 1e-09
Identities = 25/34 (73%), Positives = 33/34 (97%)
Frame = +1
Query: 16 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGPPI 117
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNG P+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPL 39
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 281 PSTRNM*TKPQRRKSKTS*YNTIGVCW 361
P TRNM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 55.6 bits (128), Expect = 1e-07
Identities = 36/114 (31%), Positives = 49/114 (42%)
Frame = +2
Query: 113 PLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRVTVKGGGHVAQVYAINKLFQRL*SPSTR 292
PL+++ LQYKL E LLL KE+ + + I V VKG GHV Q+YA+ + + P
Sbjct: 49 PLEMIRLLTLQYKLLELGLLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYP 108
Query: 293 NM*TKPQRRKSKTS*YNTIGVCWWLTXXXXXXXXXXXXXXXXDTRNLTVKPSRK 454
+ T CWW T TRN + KP +K
Sbjct: 109 KYVDEASEEIKDT----LTRPCWWFTPVAMNPRNLQALVPVLTTRNHSSKPIKK 158
Score = 45.6 bits (103), Expect = 1e-04
Identities = 34/108 (31%), Positives = 50/108 (46%)
Frame = +1
Query: 19 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGPPIGLG*XQTAAVQTSGTYPFARQGKILYG 198
+Q+VQ+F K+ A AV C+ G G +R+N P+ + T + + ++
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 199 *XXXXXXXXXXXXXXLRYQQAISKALIAFYQKYVDEASKKEIKDILVQ 342
Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology domain
containing, family M (with RUN domain) member 1 protein.
Length = 1056
Score = 34.7 bits (76), Expect = 0.20
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -3
Query: 304 RLHISGRRRSEPLK*LVDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 137
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 914 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 967
>AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein.
Length = 628
Score = 34.7 bits (76), Expect = 0.20
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -3
Query: 304 RLHISGRRRSEPLK*LVDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 137
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 486 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 539
>AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens B2
gene partial cDNA, clone B2E. ).
Length = 926
Score = 34.7 bits (76), Expect = 0.20
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -3
Query: 304 RLHISGRRRSEPLK*LVDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 137
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 784 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 837
>AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein.
Length = 1058
Score = 34.7 bits (76), Expect = 0.20
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -3
Query: 304 RLHISGRRRSEPLK*LVDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 137
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>Y17931-1|CAA76948.1| 115|Homo sapiens immunoglobulin heavy chain
protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 58 TAVAYCKRGHGMLRVNGPPIGL 123
TAV YC RGH M+R N P G+
Sbjct: 81 TAVYYCARGHVMVRGNTPRYGM 102
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 307 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 390
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 307 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 390
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 307 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 390
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AK090419-1|BAC03400.1| 266|Homo sapiens FLJ00327 protein protein.
Length = 266
Score = 29.9 bits (64), Expect = 5.8
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 47 RKPPPQLRIASVVMECCV*TGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 196
R PPPQ R+ S ++E C G P+D L L + G +K+S+
Sbjct: 58 RHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQ---TFGDDKYSL 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,127,876
Number of Sequences: 237096
Number of extensions: 1688780
Number of successful extensions: 3781
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3772
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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