Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30649.Seq
         (528 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   180   1e-45
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   180   1e-45
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    29   3.9  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    29   3.9  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    28   9.0  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  180 bits (437), Expect = 1e-45
 Identities = 94/148 (63%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
 Frame = +1

Query: 1   EARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGPPIGLG*XQTAAVQTSGTYPFARQ 180
           + RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNG P+     +   +Q     P    
Sbjct: 3   QKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQ--IEPKVLQYKLQEPLLLL 60

Query: 181 GKILYG*XXXXXXXXXXXXXXLRY--QQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 354
           GK  +                  Y  +QAISKAL+AFYQKYVDEASKKEIKDILVQYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 355 LLVADPRRCEPKKFGGPGARARYQKSYR 438
           LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 121 LLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  180 bits (437), Expect = 1e-45
 Identities = 94/148 (63%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
 Frame = +1

Query: 1   EARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGPPIGLG*XQTAAVQTSGTYPFARQ 180
           + RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNG P+     +   +Q     P    
Sbjct: 3   QKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQ--IEPKVLQYKLQEPLLLL 60

Query: 181 GKILYG*XXXXXXXXXXXXXXLRY--QQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 354
           GK  +                  Y  +QAISKAL+AFYQKYVDEASKKEIKDILVQYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 355 LLVADPRRCEPKKFGGPGARARYQKSYR 438
           LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 121 LLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +1

Query: 355 LLVADPRRCEPKKFGGPGARARY 423
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +1

Query: 355 LLVADPRRCEPKKFGGPGARARY 423
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
           protein.
          Length = 1734

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 340 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR*AFKK 453
           ++D+ LLVA P  C PKK   P    + Q+  +   KK
Sbjct: 233 RFDQRLLVAIPPNCPPKKQNKPQQNKQQQQQNKQQQKK 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,106,633
Number of Sequences: 53049
Number of extensions: 487990
Number of successful extensions: 1453
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)