BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30643.Seq
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p pro... 141 1e-33
BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p pro... 141 1e-33
AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-P... 141 1e-33
AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-P... 141 1e-33
AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation ... 140 2e-33
AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation ... 101 1e-21
AY118917-1|AAM50777.1| 226|Drosophila melanogaster LD22317p pro... 38 0.019
AE013599-799|AAF58982.1| 226|Drosophila melanogaster CG11784-PA... 38 0.019
AY122149-1|AAM52661.1| 229|Drosophila melanogaster LD04004p pro... 31 1.7
AY070667-1|AAL48138.1| 243|Drosophila melanogaster RH04924p pro... 31 1.7
AE014296-1469|AAF50405.1| 243|Drosophila melanogaster CG6781-PA... 31 1.7
AE013599-2682|AAF57695.1| 223|Drosophila melanogaster CG17531-P... 31 1.7
AE014297-602|AAN13352.1| 166|Drosophila melanogaster CG17944-PA... 29 6.7
BT022146-1|AAY51541.1| 302|Drosophila melanogaster IP01459p pro... 29 8.9
AE014297-3849|AAF56506.2| 302|Drosophila melanogaster CG4956-PA... 29 8.9
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P... 29 8.9
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 29 8.9
>BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p
protein.
Length = 341
Score = 141 bits (341), Expect = 1e-33
Identities = 90/180 (50%), Positives = 115/180 (63%), Gaps = 7/180 (3%)
Frame = +1
Query: 1 YTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVL 180
YTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE+A+G+
Sbjct: 27 YTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQ-Y 85
Query: 181 LTESNAIAYYVANESLRGGDL------ATQAVSGSGHHGLTANYC-LLPALGSSLTLVSC 339
L+ESNAIAY +ANE LRGG Q +S + + + A+ + P LG +
Sbjct: 86 LSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLG--ILPQQK 143
Query: 340 NSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESLADVIVFSTLLHAFQHVLDPTSVR 519
NST + +++ K F R +LAD++VFS+LLH +++VL+P SVR
Sbjct: 144 NSTAKQ-EAEAVLQQLNQKLQDATFLAG----ERITLADIVVFSSLLHLYEYVLEP-SVR 197
Score = 101 bits (242), Expect = 1e-21
Identities = 56/131 (42%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 252 SRVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 431
++V QW S++D+E++PASCAWVFP LGI+ K + AK + A L+ L+ L TFL
Sbjct: 111 AQVQQWISFADNEIVPASCAWVFPLLGILPQQKNST--AKQEAEAVLQQLNQKLQDATFL 168
Query: 432 VTERITCR-CHCLQYTAACFPARARPDVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAA 608
ERIT + P VRS+ NV RWF+T+ +Q QV AVV LC
Sbjct: 169 AGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCEK 228
Query: 609 PPTYDPKKYQE 641
+DPKKY E
Sbjct: 229 ALVFDPKKYAE 239
>BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p
protein.
Length = 460
Score = 141 bits (341), Expect = 1e-33
Identities = 90/180 (50%), Positives = 115/180 (63%), Gaps = 7/180 (3%)
Frame = +1
Query: 1 YTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVL 180
YTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE+A+G+
Sbjct: 36 YTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQ-Y 94
Query: 181 LTESNAIAYYVANESLRGGDL------ATQAVSGSGHHGLTANYC-LLPALGSSLTLVSC 339
L+ESNAIAY +ANE LRGG Q +S + + + A+ + P LG +
Sbjct: 95 LSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLG--ILPQQK 152
Query: 340 NSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESLADVIVFSTLLHAFQHVLDPTSVR 519
NST + +++ K F R +LAD++VFS+LLH +++VL+P SVR
Sbjct: 153 NSTAKQ-EAEAVLQQLNQKLQDATFLAG----ERITLADIVVFSSLLHLYEYVLEP-SVR 206
Score = 101 bits (242), Expect = 1e-21
Identities = 56/131 (42%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 252 SRVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 431
++V QW S++D+E++PASCAWVFP LGI+ K + AK + A L+ L+ L TFL
Sbjct: 120 AQVQQWISFADNEIVPASCAWVFPLLGILPQQKNST--AKQEAEAVLQQLNQKLQDATFL 177
Query: 432 VTERITCR-CHCLQYTAACFPARARPDVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAA 608
ERIT + P VRS+ NV RWF+T+ +Q QV AVV LC
Sbjct: 178 AGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCEK 237
Query: 609 PPTYDPKKYQE 641
+DPKKY E
Sbjct: 238 ALVFDPKKYAE 248
>AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-PB,
isoform B protein.
Length = 431
Score = 141 bits (341), Expect = 1e-33
Identities = 90/180 (50%), Positives = 115/180 (63%), Gaps = 7/180 (3%)
Frame = +1
Query: 1 YTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVL 180
YTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE+A+G+
Sbjct: 7 YTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQ-Y 65
Query: 181 LTESNAIAYYVANESLRGGDL------ATQAVSGSGHHGLTANYC-LLPALGSSLTLVSC 339
L+ESNAIAY +ANE LRGG Q +S + + + A+ + P LG +
Sbjct: 66 LSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLG--ILPQQK 123
Query: 340 NSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESLADVIVFSTLLHAFQHVLDPTSVR 519
NST + +++ K F R +LAD++VFS+LLH +++VL+P SVR
Sbjct: 124 NSTAKQ-EAEAVLQQLNQKLQDATFLAG----ERITLADIVVFSSLLHLYEYVLEP-SVR 177
Score = 101 bits (242), Expect = 1e-21
Identities = 56/131 (42%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 252 SRVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 431
++V QW S++D+E++PASCAWVFP LGI+ K + AK + A L+ L+ L TFL
Sbjct: 91 AQVQQWISFADNEIVPASCAWVFPLLGILPQQKNST--AKQEAEAVLQQLNQKLQDATFL 148
Query: 432 VTERITCR-CHCLQYTAACFPARARPDVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAA 608
ERIT + P VRS+ NV RWF+T+ +Q QV AVV LC
Sbjct: 149 AGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCEK 208
Query: 609 PPTYDPKKYQE 641
+DPKKY E
Sbjct: 209 ALVFDPKKYAE 219
>AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-PA,
isoform A protein.
Length = 431
Score = 141 bits (341), Expect = 1e-33
Identities = 90/180 (50%), Positives = 115/180 (63%), Gaps = 7/180 (3%)
Frame = +1
Query: 1 YTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVL 180
YTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE+A+G+
Sbjct: 7 YTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQ-Y 65
Query: 181 LTESNAIAYYVANESLRGGDL------ATQAVSGSGHHGLTANYC-LLPALGSSLTLVSC 339
L+ESNAIAY +ANE LRGG Q +S + + + A+ + P LG +
Sbjct: 66 LSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLG--ILPQQK 123
Query: 340 NSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESLADVIVFSTLLHAFQHVLDPTSVR 519
NST + +++ K F R +LAD++VFS+LLH +++VL+P SVR
Sbjct: 124 NSTAKQ-EAEAVLQQLNQKLQDATFLAG----ERITLADIVVFSSLLHLYEYVLEP-SVR 177
Score = 101 bits (242), Expect = 1e-21
Identities = 56/131 (42%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 252 SRVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 431
++V QW S++D+E++PASCAWVFP LGI+ K + AK + A L+ L+ L TFL
Sbjct: 91 AQVQQWISFADNEIVPASCAWVFPLLGILPQQKNST--AKQEAEAVLQQLNQKLQDATFL 148
Query: 432 VTERITCR-CHCLQYTAACFPARARPDVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAA 608
ERIT + P VRS+ NV RWF+T+ +Q QV AVV LC
Sbjct: 149 AGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCEK 208
Query: 609 PPTYDPKKYQE 641
+DPKKY E
Sbjct: 209 ALVFDPKKYAE 219
>AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 431
Score = 140 bits (338), Expect = 2e-33
Identities = 90/180 (50%), Positives = 114/180 (63%), Gaps = 7/180 (3%)
Frame = +1
Query: 1 YTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVL 180
YTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE+A+G+
Sbjct: 7 YTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQ-Y 65
Query: 181 LTESNAIAYYVANESLRGGDL------ATQAVSGSGHHGLTANYCL-LPALGSSLTLVSC 339
L+ESNAIAY +ANE LRGG Q +S + + + A+ P LG +
Sbjct: 66 LSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWDFPLLG--ILPQQK 123
Query: 340 NSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESLADVIVFSTLLHAFQHVLDPTSVR 519
NST + +++ K F R +LAD++VFS+LLH +++VL+P SVR
Sbjct: 124 NSTAKQ-EAEAVLQQLNQKLQDATFLAG----ERITLADIVVFSSLLHLYEYVLEP-SVR 177
Score = 98.7 bits (235), Expect = 7e-21
Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = +3
Query: 252 SRVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 431
++V QW S++D+E++PASCAW FP LGI+ K + AK + A L+ L+ L TFL
Sbjct: 91 AQVQQWISFADNEIVPASCAWDFPLLGILPQQKNST--AKQEAEAVLQQLNQKLQDATFL 148
Query: 432 VTERITCR-CHCLQYTAACFPARARPDVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAA 608
ERIT + P VRS+ NV RWF+T+ +Q QV AVV LC
Sbjct: 149 AGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCEK 208
Query: 609 PPTYDPKKYQE 641
+DPKKY E
Sbjct: 209 ALVFDPKKYAE 219
>AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 360
Score = 101 bits (242), Expect = 1e-21
Identities = 56/131 (42%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 252 SRVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 431
++V QW S++D+E++PASCAWVFP LGI+ K + AK + A L+ L+ L TFL
Sbjct: 20 AQVQQWISFADNEIVPASCAWVFPLLGILPQQKNST--AKQEAEAVLQQLNQKLQDATFL 77
Query: 432 VTERITCR-CHCLQYTAACFPARARPDVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAA 608
ERIT + P VRS+ NV RWF+T+ +Q QV AVV LC
Sbjct: 78 AGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCEK 137
Query: 609 PPTYDPKKYQE 641
+DPKKY E
Sbjct: 138 ALVFDPKKYAE 148
>AY118917-1|AAM50777.1| 226|Drosophila melanogaster LD22317p
protein.
Length = 226
Score = 37.5 bits (83), Expect = 0.019
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +1
Query: 25 AYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAI- 201
A ++ A+ G D+++ P + + SE+F+K P ++P F +DG+V + +S+AI
Sbjct: 15 ARACILVAKLIGLDLELKPVDFAKKEHLSEEFVKLNPQHQIPVFVDSDGEVYV-DSHAIV 73
Query: 202 ----AYYVANESLRGGDLATQA 255
A Y N+ L DL +A
Sbjct: 74 CFLVAKYAGNDQLYPRDLKRRA 95
>AE013599-799|AAF58982.1| 226|Drosophila melanogaster CG11784-PA
protein.
Length = 226
Score = 37.5 bits (83), Expect = 0.019
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +1
Query: 25 AYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAI- 201
A ++ A+ G D+++ P + + SE+F+K P ++P F +DG+V + +S+AI
Sbjct: 15 ARACILVAKLIGLDLELKPVDFAKKEHLSEEFVKLNPQHQIPVFVDSDGEVYV-DSHAIV 73
Query: 202 ----AYYVANESLRGGDLATQA 255
A Y N+ L DL +A
Sbjct: 74 CFLVAKYAGNDQLYPRDLKRRA 95
>AY122149-1|AAM52661.1| 229|Drosophila melanogaster LD04004p
protein.
Length = 229
Score = 31.1 bits (67), Expect = 1.7
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 103 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA----NESLRGGDLATQAV 258
N SE+FLKK P VP E DG + IAY V+ +SL DL +AV
Sbjct: 47 NFSEEFLKKNPQHTVPTLED-DGHYIWDSHAIIAYLVSKYGKTDSLYPKDLLQRAV 101
>AY070667-1|AAL48138.1| 243|Drosophila melanogaster RH04924p
protein.
Length = 243
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 100 TNKSEDFLKKFPAGKVPAFE--SADGKVLLTESNAIAYYV 213
T+K E L+K P GKVPA E G +LTES I Y+
Sbjct: 55 TDKPEWLLEKNPQGKVPALEIVREPGPPVLTESLLICEYL 94
>AE014296-1469|AAF50405.1| 243|Drosophila melanogaster CG6781-PA
protein.
Length = 243
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 100 TNKSEDFLKKFPAGKVPAFE--SADGKVLLTESNAIAYYV 213
T+K E L+K P GKVPA E G +LTES I Y+
Sbjct: 55 TDKPEWLLEKNPQGKVPALEIVREPGPPVLTESLLICEYL 94
>AE013599-2682|AAF57695.1| 223|Drosophila melanogaster CG17531-PA
protein.
Length = 223
Score = 31.1 bits (67), Expect = 1.7
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 103 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA----NESLRGGDLATQAV 258
N SE+FLKK P VP E DG + IAY V+ +SL DL +AV
Sbjct: 41 NFSEEFLKKNPQHTVPTLED-DGHYIWDSHAIIAYLVSKYGKTDSLYPKDLLQRAV 95
>AE014297-602|AAN13352.1| 166|Drosophila melanogaster CG17944-PA,
isoform A protein.
Length = 166
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 235 LRGDFHWQRSKRWHCFQLEAPFHRH 161
LRGDFHW + W F HRH
Sbjct: 97 LRGDFHWPMIESWLEFPTYNNEHRH 121
>BT022146-1|AAY51541.1| 302|Drosophila melanogaster IP01459p
protein.
Length = 302
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 238 LLRGDFHWQRSKRWHCFQLEAPFHRHFRMQAL 143
LLR W R CF+ E FHRHF++ +
Sbjct: 7 LLRSTCGWSRRM---CFRAEEGFHRHFQLHRI 35
>AE014297-3849|AAF56506.2| 302|Drosophila melanogaster CG4956-PA
protein.
Length = 302
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 238 LLRGDFHWQRSKRWHCFQLEAPFHRHFRMQAL 143
LLR W R CF+ E FHRHF++ +
Sbjct: 7 LLRSTCGWSRRM---CFRAEEGFHRHFQLHRI 35
>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
isoform D protein.
Length = 7210
Score = 28.7 bits (61), Expect = 8.9
Identities = 28/94 (29%), Positives = 42/94 (44%)
Frame = +3
Query: 351 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITCRCHCLQYTAACFPARARPDVRSSLIN 530
+NVE A D+L +L +L+ L F E+ + A C RP+ ++
Sbjct: 1956 ENVESAFEDILLSLPILESQLAEEMFAKIEKAFA-----NFVAYC----ERPEA----VD 2002
Query: 531 VQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKK 632
Q+ L QP + +VGS+ AA PT D K
Sbjct: 2003 YQK--LKTLKQP-IENLVGSIGAVAAQPTVDVDK 2033
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 28.7 bits (61), Expect = 8.9
Identities = 28/94 (29%), Positives = 42/94 (44%)
Frame = +3
Query: 351 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITCRCHCLQYTAACFPARARPDVRSSLIN 530
+NVE A D+L +L +L+ L F E+ + A C RP+ ++
Sbjct: 1956 ENVESAFEDILLSLPILESQLAEEMFAKIEKAFA-----NFVAYC----ERPEA----VD 2002
Query: 531 VQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKK 632
Q+ L QP + +VGS+ AA PT D K
Sbjct: 2003 YQK--LKTLKQP-IENLVGSIGAVAAQPTVDVDK 2033
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,064,398
Number of Sequences: 53049
Number of extensions: 778730
Number of successful extensions: 2142
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2119
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -