Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30642.Seq
(698 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 3.2
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 3.2
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 3.2
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 22 5.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 9.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 9.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 9.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 9.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 9.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 9.7
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 21 9.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 9.7
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.6 bits (46), Expect = 3.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 182 TGPRELFT-MFAIAAAGHYILCSHWVSAGSCPCYRQRCSYSRHFLLYF*HKIHFKIAVT 9
TG R+++ M + AG S+ A RQR +Y+RH +L + H+ +T
Sbjct: 205 TGDRQIYPWMRKVHVAG----ASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 22.6 bits (46), Expect = 3.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 182 TGPRELFT-MFAIAAAGHYILCSHWVSAGSCPCYRQRCSYSRHFLLYF*HKIHFKIAVT 9
TG R+++ M + AG S+ A RQR +Y+RH +L + H+ +T
Sbjct: 205 TGDRQIYPWMRKVHVAG----ASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 22.6 bits (46), Expect = 3.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 182 TGPRELFT-MFAIAAAGHYILCSHWVSAGSCPCYRQRCSYSRHFLLYF*HKIHFKIAVT 9
TG R+++ M + AG S+ A RQR +Y+RH +L + H+ +T
Sbjct: 205 TGDRQIYPWMRKVHVAG----ASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 21.8 bits (44), Expect = 5.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 54 KMSTIAAPLSVAGTRSCGDPVRTQNV 131
K+STIA L V TRS P T+ +
Sbjct: 36 KLSTIALALGVERTRSELIPFLTETI 61
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
RQR SY+R+ L + HF +T
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLT 246
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
RQR SY+R+ L + HF +T
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLT 246
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
RQR SY+R+ L + HF +T
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLT 246
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
RQR SY+R+ L + HF +T
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLT 246
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
RQR SY+R+ L + HF +T
Sbjct: 178 RQRTSYTRYQTLELEKEFHFNRYLT 202
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
RQR SY+R+ L + HF +T
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLT 246
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
RQR SY+R+ L + HF +T
Sbjct: 10 RQRTSYTRYQTLELEKEFHFNRYLT 34
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 83 RQRCSYSRHFLLYF*HKIHFKIAVT 9
RQR SY+R+ L + HF +T
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLT 246
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,864
Number of Sequences: 336
Number of extensions: 3629
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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