Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30642.Seq
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 108 3e-28
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 89 2e-18
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 82 5e-16
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 80 2e-15
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 74 1e-13
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 73 2e-13
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 73 2e-13
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 69 5e-12
10_08_0620 - 19321612-19323237 58 5e-09
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 58 9e-09
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 55 6e-08
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 36 0.023
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 36 0.023
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 36 0.031
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 35 0.071
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 34 0.12
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 30 1.5
07_03_1475 + 26791214-26791490,26793507-26793706,26793866-267945... 30 2.0
04_01_0006 - 112476-114182,114627-114676,115289-115463 28 6.2
03_03_0113 + 14550435-14550822,14550831-14551660,14552105-145522... 28 6.2
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 108 bits (260), Expect(2) = 3e-28
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++MLEVEHPAAKVLVELA+LQD EVGDGTTSVVIIAAELLK ++LV+ KIHPTSIISGY
Sbjct: 19 LRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVRNKIHPTSIISGY 78
Query: 429 RL 434
RL
Sbjct: 79 RL 80
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/58 (65%), Positives = 46/58 (79%)
Frame = +2
Query: 509 INTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGPECK 682
IN AKT+MSSKLI +D+DFF+ +VVDA QA+KT N +G YPIK+INILKAHG K
Sbjct: 134 INCAKTSMSSKLINSDSDFFANLVVDAVQAVKTTNAKGEVKYPIKSINILKAHGKSAK 191
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 196 MLVDDIGDVTVTNDGATILK 255
MLVDDIGDVT+TNDGATIL+
Sbjct: 1 MLVDDIGDVTITNDGATILR 20
Score = 34.7 bits (76), Expect(2) = 3e-28
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 426 YRLACKEAVKYIQDNLTVTVESLGRPSL 509
Y+LA +EA KY+++ L V V+ LG+ SL
Sbjct: 106 YQLAMREACKYVEEKLAVKVDKLGKDSL 133
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/63 (60%), Positives = 56/63 (88%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K L +++PAAKVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV KIHP +II+GY
Sbjct: 64 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGY 123
Query: 429 RLA 437
R+A
Sbjct: 124 RMA 126
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILK 255
A AIA++VK++LGP G+DK+L G VTVTNDGATILK
Sbjct: 25 AMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILK 65
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +2
Query: 509 INTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGPECK 682
+N A TT+SSK++ D ++F+E+ VDA +K G+T ++AI ILK G K
Sbjct: 153 MNIAMTTLSSKILSQDKEYFAELAVDAVLRLK-----GST--NLEAIQILKIPGGSLK 203
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 81.8 bits (193), Expect = 5e-16
Identities = 37/80 (46%), Positives = 59/80 (73%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+++L++ HPAAK+LV++A+ QD EVGDGTT+VV++AAE LK A ++ +HP S+I Y
Sbjct: 69 MRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSY 128
Query: 429 RLACKEAVKYIQDNLTVTVE 488
R A A++ ++D L ++E
Sbjct: 129 RTAGHLAIEKVKD-LATSIE 147
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/36 (50%), Positives = 30/36 (83%)
Frame = +1
Query: 148 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
+A+ V+++LGP G+DK++ DD G T++NDGATI++
Sbjct: 35 VADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMR 70
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 518 AKTTMSSKLIGADADFFSEMVVDAAQAI 601
A TT+SSKLIG + +FF+ MVVDA AI
Sbjct: 162 AATTLSSKLIGGEKEFFASMVVDAVLAI 189
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/58 (58%), Positives = 51/58 (87%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIIS 422
+K L +++PAAKVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV KIHP +II+
Sbjct: 65 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 122
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Frame = +1
Query: 145 AIANIVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILK 255
AI+++VK++LGP G+DK+L G VTVTNDGATILK
Sbjct: 28 AISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILK 66
Score = 35.9 bits (79), Expect = 0.031
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 509 INTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGPECK 682
+N A TT+SSK++ D ++F+ + VDA +K G+T ++AI ILK G K
Sbjct: 130 MNIAMTTLSSKILSQDKEYFAGLAVDAVLRLK-----GST--NLEAIQILKKTGGSLK 180
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+ LEV+HPAAK+LV + Q EE+GDG + A ELL+ A+EL++ +HP+ II GY
Sbjct: 68 VNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGY 127
Query: 429 RLACKEAVKYIQD 467
A + V+ ++D
Sbjct: 128 TKAINKTVEILED 140
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = +1
Query: 148 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 252
++ I ++SLGP G++KM+++ + + VTND ATI+
Sbjct: 34 LSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 68
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/87 (37%), Positives = 57/87 (65%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++ +++ HPAAK ++EL++ QDEEVGDGTTSV+++A E+L A+ + HPT I Y
Sbjct: 67 LREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAY 126
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSL 509
A ++A+ + D + + V+ R ++
Sbjct: 127 TKALEDALA-VLDKIAMHVDVNDRAAM 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
A A+A+I++++LGP + KML+D G + VTNDG IL+
Sbjct: 30 AKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILR 68
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/80 (41%), Positives = 52/80 (65%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++ L++ HPAAK ++EL++ QDEEVGDGTTSV+++A E+L A + HPT I Y
Sbjct: 67 LRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAY 126
Query: 429 RLACKEAVKYIQDNLTVTVE 488
A +A+ + D + + V+
Sbjct: 127 TKALDDALS-VLDKIAIPVD 145
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
A A+A+I++++LGP + KML+D G + VTNDG IL+
Sbjct: 30 AKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILR 68
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/72 (41%), Positives = 51/72 (70%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++ ++V++ AK++VEL+ QD E+GDGTT VV++A LL+ A++L++ IHP I GY
Sbjct: 74 LEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGY 133
Query: 429 RLACKEAVKYIQ 464
LA + A +++
Sbjct: 134 ELASRIAFDHLE 145
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 145 AIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
A+A I+++SLGP G+DKML GDVT+TNDGATIL+
Sbjct: 39 AVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE 75
>10_08_0620 - 19321612-19323237
Length = 541
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +3
Query: 273 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 452
PAA++L +L++ QD GDGTT+VV++A LL+ A L+ HPT+ L AV
Sbjct: 84 PAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAV 143
Query: 453 KYIQDNLTVTVESLGRPSL 509
+ + + + VE R +L
Sbjct: 144 EVLH-GMAIPVELSDRDAL 161
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Frame = +1
Query: 145 AIANIVKSSLGPVGLDKMLVDDI--GD--VTVTNDGATIL 252
A+A ++SLGP G+DKM+ GD V +TNDGATIL
Sbjct: 37 AVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATIL 76
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+ + + PAA++L EL++ QD GDGTT+VV++A LL+ A L+ HPT+
Sbjct: 72 LSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADAL 131
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSL 509
AV+ + + + +E R SL
Sbjct: 132 HRLATRAVEVLH-AMAIPIELSDRDSL 157
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKCWKWSILLP 282
A A+A+ V++SLGP G+DKM+ +V +TNDGATIL + S+L P
Sbjct: 35 ARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILS--RMSLLQP 80
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 54.8 bits (126), Expect = 6e-08
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = +3
Query: 249 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K +++++P A ++ A QD+ GDGTTS V+ EL+K ++ + HP ++ G+
Sbjct: 63 LKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGF 122
Query: 429 RLACKEAVKYIQDNLTVTV 485
+A + +++++ T V
Sbjct: 123 DVAKRATLEFLEKFKTSVV 141
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 139 AAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
A + +++K++LGP G KMLV GD+ +T DG T+LK
Sbjct: 26 AKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLK 64
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 36.3 bits (80), Expect = 0.023
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 264 VEHPAAKVLVE----LAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYR 431
VEH A +L E +A + VGDGTT+ +I+A E++ V T +P ++ G
Sbjct: 624 VEHAGAMLLQEHVNQIASKTNSSVGDGTTTAIILAREIINLGLLAVATGANPVALRKGID 683
Query: 432 LACKEAV 452
A E +
Sbjct: 684 KAVHELI 690
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 264 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 443
VE+ AK++ + A ++ GDGTT+ V++A ++ ++V +P I G K
Sbjct: 118 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAK 177
Query: 444 EAVKYIQ 464
V +Q
Sbjct: 178 ALVSELQ 184
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 148 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
+A++V +LGP G + +L G + NDG T+ K
Sbjct: 75 LADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK 110
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 264 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 443
VE+ AK++ + A ++ GDGTT+ V++A L+ ++V +P I G K
Sbjct: 122 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAK 181
Query: 444 EAVKYIQ 464
V+ ++
Sbjct: 182 ALVEELK 188
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 148 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
+A++V +LGP G + +L G + NDG T+ +
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAR 114
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 34.7 bits (76), Expect = 0.071
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 264 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISG 425
+E+ A ++ E+A ++ GDGTT+ ++A E++K V + +P SI G
Sbjct: 106 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKG 159
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 264 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISG 425
+E+ A ++ E+A ++ GDGTT+ ++A E++K V + +P S+ G
Sbjct: 101 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKG 154
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 148 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKCWKWS 270
+A+ VK ++GP G ++ G VT DG T+ K ++S
Sbjct: 92 LADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFS 132
>07_03_1475 +
26791214-26791490,26793507-26793706,26793866-26794507,
26794888-26795038,26795434-26795583,26795675-26795847,
26796088-26796195
Length = 566
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 642 LIGYIVFPLGFIVLIACAASTTISEKKSASAPISLDDMVVLAVLIETACQVTLLL 478
LIG I+ L + C + I S S+ + +DD++ + L+ T C+ LL
Sbjct: 356 LIGNILTRLALYPNLQCQLHSEIVSGHSESSELKIDDVLRMKFLLATVCESARLL 410
>04_01_0006 - 112476-114182,114627-114676,115289-115463
Length = 643
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 125 LCSHWVSAGSCPCYRQRCSYSRHF 54
+CSH V G+ + CS+S HF
Sbjct: 80 VCSHGVKTGAAAVFTAECSHSFHF 103
>03_03_0113 +
14550435-14550822,14550831-14551660,14552105-14552278,
14552350-14552517
Length = 519
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 354 AAELLKNADELVKTKIHPTSIISGYRLACK 443
AAEL + E + +++ P SI++G R ACK
Sbjct: 6 AAELPDDIVEKIISRLPPRSIVTGCRAACK 35
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,891,714
Number of Sequences: 37544
Number of extensions: 384644
Number of successful extensions: 958
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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