Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30641.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.92 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.92 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +3

Query: 78  GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEK 251
           G K     K+P++A++L++   R+K+  +    +   I +  G  W ++   +++++ E 
Sbjct: 472 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYEL 531

Query: 252 AQKPK 266
           A++ +
Sbjct: 532 ARRER 536


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +3

Query: 78  GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEK 251
           G K     K+P++A++L++   R+K+  +    +   I +  G  W ++   +++++ E 
Sbjct: 364 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYEL 423

Query: 252 AQKPK 266
           A++ +
Sbjct: 424 ARRER 428


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +1

Query: 622 YIFFNY*YNLEVYLYFYKGIILMKLHLFNVVSVSLLXPSGFIKF*VEYFH 771
           Y ++ +   L VY YFY   I+  +HL  ++ +       F    + YF+
Sbjct: 102 YFYYAFIILLCVY-YFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 610 VFSIYI-FFNY*YNLEVYLYFYKGIILMKLHLFNVVSV 720
           +F+I++ F+     L    YFY   IL  +HL  +V +
Sbjct: 221 IFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCI 258


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 18/73 (24%), Positives = 34/73 (46%)
 Frame = +2

Query: 464 YILVLKFYYLSF*ILTMK*MFFFLSGFCYLDLNNTLFCSITHNKMCFKEYFLYIFSLIIN 643
           ++L+ K Y  +   +T + +FF +  +    LN  L C+ T  +  ++   LY  S +  
Sbjct: 120 HMLIWKSYKRTQIFITCE-LFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQ 178

Query: 644 TI*KFTCIFIKVL 682
            +    C F+ VL
Sbjct: 179 VMLIQFCAFVVVL 191


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +1

Query: 451 ISLNLYFSFKVLLFIILNSDHE---MNVFFSFWLLLLRF 558
           I  N ++  K LL+ +L    E   +N  FSF  +LLRF
Sbjct: 365 IGFNCFWVMK-LLYNVLRFGAESQTINFMFSFGFILLRF 402


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 257  KAKEQYIVDLESFNANGGGPV 319
            K   QY V +++FN  G GP+
Sbjct: 1067 KTYTQYSVVVQAFNKVGAGPL 1087


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -1

Query: 599 TFYYELSNKKVYYLNLSNKSQKEKKTFISWSEFKM 495
           +FY E ++   Y+L +SN + K      + S + +
Sbjct: 86  SFYLEATDDFAYFLEVSNNNFKTYSNVTTCSYYSL 120


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 569 LFCSITHNKMCFKEYFLYIFSLII 640
           L CSI    M F E+F +   +II
Sbjct: 197 LVCSIKELNMIFNEFFGWPIIMII 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,177
Number of Sequences: 336
Number of extensions: 3582
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)