Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30641.Seq
(797 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 85 5e-17
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32) 50 2e-06
SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34) 49 5e-06
SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31) 46 5e-05
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 43 3e-04
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26) 43 3e-04
SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28) 41 0.001
SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22) 41 0.001
SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 41 0.001
SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 41 0.001
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 40 0.002
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031) 40 0.002
SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08) 40 0.002
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10) 39 0.004
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31) 37 0.022
SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021) 35 0.066
SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.088
SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24) 34 0.12
SB_18120| Best HMM Match : Colipase_C (HMM E-Value=0.87) 32 0.47
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_35037| Best HMM Match : Far-17a_AIG1 (HMM E-Value=4.6e-30) 31 0.82
SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08) 31 1.1
SB_18060| Best HMM Match : Pepsin-I3 (HMM E-Value=0.67) 31 1.4
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094) 29 5.8
SB_24670| Best HMM Match : DivIC (HMM E-Value=2) 28 7.6
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 85.4 bits (202), Expect = 5e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWEEKA 254
K + PKR MSAY+LWLN R +IKD NPG+ VTE++K AGE+W+++ DKS+WEEKA
Sbjct: 537 KDPNAPKRAMSAYMLWLNDTRQEIKDKNPGISVTEVSKVAGEMWKNLTDKSKWEEKA 593
>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQ 257
K +KPKR +SAY ++N R +K DNP ++K GE+W M DK+++++ A+
Sbjct: 97 KDPNKPKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQYQDMAK 156
Query: 258 KPK 266
K K
Sbjct: 157 KDK 159
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEKAQ 257
K +KPK SAY +L R K++ + + + +K + E W++M +K + +KA
Sbjct: 7 KDPNKPKGAKSAYNFFLQDQREKLQREEGKFSLADFSKVSAEKWKNMSEEEKETFVQKAG 66
Query: 258 KPK 266
K K
Sbjct: 67 KDK 69
>SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32)
Length = 398
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Frame = +3
Query: 60 IKIHI*GFKMTDKP--KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYD- 230
+ + + G K T KP KRPM+A+++W +AR K+ D P L E++K G++W+ + D
Sbjct: 50 LPVRVNGIK-TQKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWKLLNDS 108
Query: 231 -KSEWEEKAQK 260
K + E+A++
Sbjct: 109 EKKPFIEEAER 119
>SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQ 257
K + KRPM+A+++W R KI +NP + +EI+K+ G W+ + DK + E+A+
Sbjct: 322 KPVEHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAK 381
Query: 258 K 260
K
Sbjct: 382 K 382
>SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)
Length = 179
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQ 257
K + KRPM+A+++W R KI +NP + +EI+K+ G W+ + DK + E+A+
Sbjct: 5 KPVEHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAK 64
Query: 258 K 260
K
Sbjct: 65 K 65
>SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = +3
Query: 93 DKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 239
D+ KRPM+A+++W R K+ DNP + +EI+K+ G W+ + ++ +
Sbjct: 787 DRVKRPMNAFMVWSRERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQEK 835
>SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)
Length = 367
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEKAQK 260
KRPM+++++W R K ++NP L EI+K G+ W + DK + EKA++
Sbjct: 95 KRPMNSFMIWAKVMRRKFAEENPKLHNAEISKLLGKAWNELTTKDKRPFVEKAER 149
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQ 257
K K KRPM+++++W SAR K+ + P + E++K G++WR S +K + ++A
Sbjct: 106 KKDPKVKRPMNSFMVWAQSARRKLAEQYPHVHNAELSKMLGKLWRMLSAAEKQPYVDEAA 165
Query: 258 K 260
+
Sbjct: 166 R 166
>SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +3
Query: 90 TDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 224
T++ KRPM+A+++W R ++ D NP L E++K G WR++
Sbjct: 363 TERIKRPMNAFMVWAQVERRRLADANPELHNAELSKMLGLTWRAL 407
>SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQ 257
K D KRPM+AY++W R +I ++ P + +EI+K+ G W S+ +K + E+A+
Sbjct: 3 KPGDHIKRPMNAYMVWSRKERRRIAEECPRMLNSEISKRLGLEWNSLTLDEKQPYVEEAK 62
Query: 258 K 260
+
Sbjct: 63 R 63
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEKAQ 257
K + PK P++ Y+ +LN R K++ +NP L E+ + G +W + K + E+A+
Sbjct: 172 KDVNAPKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQLPTPQKQLFLEEAE 231
Query: 258 KPK 266
K K
Sbjct: 232 KDK 234
>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
Length = 245
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +3
Query: 90 TDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEKAQKP 263
++K KRP++A++LW R I ++NP + +I++K G W+ + +K+ + E+A+K
Sbjct: 16 SEKIKRPLNAFILWSKKRRRVIANENPQMHNFDISRKLGLEWQKLTEEEKAYYFEEAKKL 75
Query: 264 K 266
K
Sbjct: 76 K 76
>SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQ 257
KRPM+ +++W R +I +NPG+ ++K G W+ S+ +K + EKA+
Sbjct: 9 KRPMNCFMVWSREKRCQILQENPGINNARLSKLLGMAWKKLSVEEKEPYIEKAK 62
>SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28)
Length = 245
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 93 DKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 224
D KRP++++++W R + +NP ++ EI+K G+ WR M
Sbjct: 8 DHVKRPLNSFMVWAKEKRRAMNRENPKMRNAEISKILGDEWRKM 51
>SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQK 260
KRPM+A+++W R K+ +++P + EI+K+ G+ W+ S +K + E++++
Sbjct: 46 KRPMNAFMVWSQIERRKMAEEHPDMHNAEISKRLGKRWKLLSESEKRPFVEESER 100
>SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)
Length = 299
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 93 DKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQKPK 266
++PK P+++Y + R+K+ P LK TE+A K + WR M + K + E+ ++ K
Sbjct: 150 NQPKMPLTSYFRYCQKHRAKLAKKYPNLKSTELAAKLSKKWRKMSEERKKAYTEQYEEEK 209
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 108 PMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE--WEEK 251
P+SA+ LW N AR + NP + ++ KK W+ + +K + W +K
Sbjct: 230 PLSAFELWANQARKDLLVSNPDISAKKLKKKLKRKWKEIDEKGKKTWIKK 279
>SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 267
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 224
KRPM+A+++W + R ++ +NP L ++I+K G WR +
Sbjct: 8 KRPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48
>SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 494
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 224
KRPM+A+++W + R ++ +NP L ++I+K G WR +
Sbjct: 8 KRPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48
>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
Length = 1204
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 239
K+ +P +P+SAY ++ ++ I+ NP + EIAK G++W ++ ++ +
Sbjct: 920 KIEGEPPKPLSAYQIFFKETQAAIRLQNPSAQFGEIAKIVGQMWENLPEEQK 971
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Frame = +3
Query: 93 DKPKRPMSAYLLW---LNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQ 257
+KPK P++ Y+ + LNS R +K +P L EI K G+ W S+ +K ++ ++A+
Sbjct: 192 NKPKAPVTGYVHYVRFLNSRRESVKHQHPHLTFPEITKMLGQEWNSLLPEEKQKFLDEAE 251
Query: 258 KPK 266
+ K
Sbjct: 252 EDK 254
>SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031)
Length = 406
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 93 DKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEKAQ 257
D+ + + + LWL R +I+++NP + ++ K A + W+ + +K W EKA+
Sbjct: 327 DRQTKKKNGFSLWLEENRDQIEEENPDIPDEDVVKIAMKTWKGLDSVEKKVWNEKAK 383
>SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08)
Length = 324
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 99 PKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWEE 248
P++P+ Y+ + ++K+ NP K+ +I K G++WR + D + +E
Sbjct: 28 PEKPLMPYMRYSRKVWDQVKNQNPDFKLWDIGKIIGQMWRDLDDAEKQQE 77
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 96 KPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 239
K KRPM+A+++W RS I P EI+ + GEIW + + +
Sbjct: 100 KVKRPMNAFMIWARLHRSTIAKRYPQANNAEISIRLGEIWNDLSSEQQ 147
>SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10)
Length = 145
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQ 257
KR S YLL+ + R I+ ++P EI++ GE WR S K+E+E KAQ
Sbjct: 36 KRGQSGYLLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRNASAARKAEYENKAQ 89
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQ 257
KR S YLL+ + R I+ ++P EI++ GE WR S K+E+E KAQ
Sbjct: 1269 KRGQSGYLLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRNASAARKAEYENKAQ 1322
>SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQK 260
KRPM+A+++W R + P + +EI+K G W++M D K + EKA++
Sbjct: 10 KRPMNAFMVWSKERRRIKSQECPRMHNSEISKILGCEWKAMKDELKQPYIEKAKE 64
>SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31)
Length = 690
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 84 KMTDKPKRPMSAYLLWLNSARSKI--KDDNPGLKVTEIAKKAGEIWRSMYDKSE 239
K DKPKRP +AY L+L + R ++ K G K+ + AGE WR M D+ +
Sbjct: 572 KDPDKPKRPPTAYFLFLAAFRKEMAGKALEDGKKIPSL---AGERWREMSDEDK 622
Score = 34.7 bits (76), Expect = 0.088
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIK-----DDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQK 260
KR SAY+ + + R+K+K P K E+AK AGE W+ + D K + KA+
Sbjct: 497 KRASSAYIHFTSDFRAKLKAKSAKSGTPLPKANEVAKLAGEEWKKLNDEQKKPYVAKAEA 556
Query: 261 PKNNTL 278
K L
Sbjct: 557 DKQRYL 562
>SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021)
Length = 200
Score = 35.1 bits (77), Expect = 0.066
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +3
Query: 93 DKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPKNN 272
D+ + + + LWL R +I+++NP + ++ K A + W+ + E+K +K ++
Sbjct: 34 DRQTKKKNGFSLWLEENRDQIEEENPDIPDEDVVKIAMKTWKGL---DSVEKKLEKCYDD 90
Query: 273 TL 278
TL
Sbjct: 91 TL 92
>SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 34.7 bits (76), Expect = 0.088
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 96 KPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM 224
K KRP A+ + K+K++NP LK EI K + W ++
Sbjct: 305 KHKRPTPAFFRFRQDYADKVKEENPHLKDAEIRKHLSDQWANL 347
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 99 PKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPKN 269
P++P + L++ +KIK +N G+ +I ++ G WR++ SE EE +K ++
Sbjct: 374 PRKPPRHFSLFMRENFAKIKAENQGMSNPDIMRELGAKWRNL-PFSEREEIRRKSED 429
>SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24)
Length = 201
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 239
KRPM+A+++W + R K+ P + EI+K G W + ++ +
Sbjct: 10 KRPMNAFMVWSRTERRKLALKYPNMLNCEISKLLGAEWSRLSEEEK 55
>SB_18120| Best HMM Match : Colipase_C (HMM E-Value=0.87)
Length = 363
Score = 32.3 bits (70), Expect = 0.47
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 310 RSRREKKENPKTREESETGAKNKESETGRRG 402
+SRREK+ NP+ R+++ G + K+S R+G
Sbjct: 284 QSRREKRSNPEERDKAIPGRETKQSRGERQG 314
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 301 KWRRSRR-EKKENPKTREESETGAKNKESETGRRG 402
KW R E+++ PKT EE E ++N GRRG
Sbjct: 236 KWLHDRYVEEEQAPKTAEELEESSRNLRRNAGRRG 270
>SB_35037| Best HMM Match : Far-17a_AIG1 (HMM E-Value=4.6e-30)
Length = 227
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 271 LFFGFCAFSSHSLLSYMDLQISPAFLAISVTFNPGLSSFIFDLALFNH 128
LF+G C H++ S DL+ P +L + PGL S I + LF H
Sbjct: 98 LFWGLCIIDPHAIQSKEDLEQIPLWLNHYMHSFPGL-SVILETFLFKH 144
>SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08)
Length = 271
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 102 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 266
K PM+A+++ R NPG+ +E +K G W+ M E + +PK
Sbjct: 10 KSPMNAFMVCSRGKRKHYASINPGMHNSEFSKSLGPEWK-MLTSEEKDPFIAEPK 63
>SB_18060| Best HMM Match : Pepsin-I3 (HMM E-Value=0.67)
Length = 328
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 193 PKKQAKSGGPCMTKANGKKRRKSQ-RTIHCRFRII*CKWRRSRREKKENPKTREESETGA 369
PKK+ S + + +KRR + R + ++ +W R + EKKE + ++E
Sbjct: 257 PKKKKPSNQQILRSSEVRKRRDDELRKLELAKQL---EWDRKQEEKKERKQKKKEERMRK 313
Query: 370 KNKESE 387
K +E E
Sbjct: 314 KEQEKE 319
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 301 KWRRSRREKKENPKTREESETGAKNKESETGRRGR 405
K R+ +++KK+ K EE E +N+E E R+ R
Sbjct: 15 KKRKKKKQKKQKKKKEEEEEEEEENEEEERRRKRR 49
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 244 KKRRKSQRTIHCRFRII*CKWRRSRREKKENPKTREESETGAKNKESE 387
++RR+ +R R R + R+ ++KKE + EE ET A N+E E
Sbjct: 42 EERRRKRRRRRRRRR----RRRKKEKKKKEEEEEEEEEETEAVNEEEE 85
>SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094)
Length = 332
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 153 IKDDNPGL-KVTEIAKKAGEIWRSMYDKSEWEEKAQK 260
IK D L K TE AKKA E W+ + + W+E+ ++
Sbjct: 232 IKKDLKKLPKTTEEAKKAEERWQRLKTELNWDERYEE 268
>SB_24670| Best HMM Match : DivIC (HMM E-Value=2)
Length = 152
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 117 AYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQK 260
AY +W ++ ++ K +K TE+A K ++ ++ + EWE+K +K
Sbjct: 9 AYSVWQHAQQTLTKKREALVK-TELAGKNEKLPQAQEEVKEWEQKVEK 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,061,659
Number of Sequences: 59808
Number of extensions: 332453
Number of successful extensions: 1085
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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