Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30640.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 109 4e-23
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 85 6e-16
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 83 3e-15
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 81 1e-14
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 70 3e-11
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 69 4e-11
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 66 4e-10
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 66 5e-10
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 64 2e-09
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 63 4e-09
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 61 2e-08
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 61 2e-08
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 60 3e-08
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 59 6e-08
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 58 1e-07
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 57 3e-07
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 54 2e-06
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 52 5e-06
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 43 0.003
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 43 0.003
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 42 0.010
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 41 0.013
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 40 0.023
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 40 0.031
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 40 0.041
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 39 0.054
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 38 0.095
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 38 0.095
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 38 0.17
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 38 0.17
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 37 0.22
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 37 0.29
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 37 0.29
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 36 0.67
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.88
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 34 1.5
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 34 2.0
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 33 2.7
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 33 2.7
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 33 2.7
UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Re... 33 3.6
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 33 4.7
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 32 6.2
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 32 6.2
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 32 8.2
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 109 bits (261), Expect = 4e-23
Identities = 53/81 (65%), Positives = 61/81 (75%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+ +LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLXXMIIVP 254
APP EKPE+VKTHL MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
Score = 102 bits (245), Expect = 4e-21
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
MVGS+VG+YNGKTFNQVEIKPEMIGHYLG FS+TYKPVKHGRPGIGAT
Sbjct: 89 MVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGAT 136
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 85.4 bits (202), Expect = 6e-16
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATT 403
M+GS+VGIYNGK FNQVEI+PEM+GHYLG FS+TY PV+HGR GATT
Sbjct: 89 MIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGR--AGATT 135
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKEA 194
KKR+F+ +YRGVDL++LL+M E ++L G+ KP + KLR AK A
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAA 67
Query: 195 PPNEKPEIVKTHLXXMIIVP 254
P NEKP V+TH+ MIIVP
Sbjct: 68 PENEKPAPVRTHMRNMIIVP 87
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 83.0 bits (196), Expect = 3e-15
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKEA 194
KKR F+KF++RG ++D LL M N L +L + GLK++P+ L+ KLRRAKKEA
Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEA 76
Query: 195 PPNE--KPEIVKTHLXXMIIVP 254
KPE+VKTHL MIIVP
Sbjct: 77 SDENKMKPEVVKTHLRNMIIVP 98
Score = 69.7 bits (163), Expect = 3e-11
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGI 391
M+GS+VG++NGK FN++ IKPEMIGHYL FS+T K V H RP I
Sbjct: 100 MIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRI 144
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 81.0 bits (191), Expect = 1e-14
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXX------GLKRKPMALVXKL 173
+KK+ FR FT RGVDLDQLLDM +EQ M+L GL RK +L+ +L
Sbjct: 20 QKKQTFRNFTQRGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQRSLLKRL 79
Query: 174 RRAKKEAPPNEKPEIVKTHLXXMIIVP 254
R+AKK APP EKPE+VKTH ++++P
Sbjct: 80 RKAKKGAPPTEKPEVVKTHPRDVLLLP 106
Score = 34.7 bits (76), Expect = 1.2
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEI 313
MVGS VG+Y+GKTF QVE+
Sbjct: 108 MVGSTVGVYDGKTFKQVEM 126
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 70.1 bits (164), Expect = 3e-11
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATTQLK 412
VG IV +YNG ++ + EIKPEMIGHYLG F +T K VKH PG+GAT K
Sbjct: 96 VGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSK 146
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 69.3 bits (162), Expect = 4e-11
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
MVG V +YNGK + V+IKPEMIGHYLG FS T K KH PGIGAT
Sbjct: 84 MVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGAT 131
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 66.1 bits (154), Expect = 4e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
MVG +YNGK F + ++ PEMIGHYLG FS+T K V+HG PG+ AT
Sbjct: 83 MVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKAT 130
Score = 49.2 bits (112), Expect = 5e-05
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +3
Query: 27 FRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKEAPPNE 206
++KF YRG LD+LL+MP ++ ++L+ G K L+ K+R+ +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVRE---GK 65
Query: 207 KPEIVKTHLXXMIIVP 254
+ +KTH+ MII+P
Sbjct: 66 YSKTIKTHVRDMIILP 81
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 65.7 bits (153), Expect = 5e-10
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Frame = +2
Query: 212 RDREDSLEXHDHRXXMVGSIVG----IYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHG 379
R D L+ H + S++ +YNG +++ +E++ M+G +LG FS+TYKPVKHG
Sbjct: 76 RKTNDKLKTHVRNCIITPSMINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHG 135
Query: 380 RPGIGAT 400
PGIGAT
Sbjct: 136 NPGIGAT 142
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATTQLK 412
VG +Y G+ F +VE++PEMIGHYLG F +T V+HG+ GIGAT K
Sbjct: 85 VGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSK 135
Score = 40.3 bits (90), Expect = 0.023
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKEAPPNEKP 212
+FTYRG DLD+L +M E + EL+ GL + ++ + R + E N
Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP- 70
Query: 213 EIVKTHLXXMIIVP 254
++THL M ++P
Sbjct: 71 --IRTHLRDMPVLP 82
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 62.9 bits (146), Expect = 4e-09
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPG 388
+VG IVG+YNGK F VE+K +MIG YL F++TYKP HG+ G
Sbjct: 94 LVGGIVGVYNGKEFVNVEVKFDMIGKYLAEFAMTYKPTTHGKTG 137
Score = 49.2 bits (112), Expect = 5e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +3
Query: 18 KRIFRKFTYRGVDLDQLLDMPN---------EQLMELMHXXXXXXXXXGLKRKPMALVXK 170
K+ +KFT+RG L++L + + ++L L G+ K V K
Sbjct: 5 KKSIKKFTFRGKGLEELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 171 LRRAKKEAPPNEKPEIVKTHLXXMIIVP 254
+RR+K++ P EKP VKTH MI++P
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIP 92
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATTQLK 412
M+G V +YNG+ F VEIKP M+G L +S++YK V HG+ GIGAT K
Sbjct: 89 MIGMTVSVYNGRQFIPVEIKPPMVGRALREYSMSYKIVSHGKVGIGATRSSK 140
Score = 46.0 bits (104), Expect = 5e-04
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMP-NEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKE 191
++R + +RGV++++L M + L +L GL K + V KLR ++
Sbjct: 8 RRRGLAQPNFRGVEVEKLATMKITDILPKLNARCRRRIGKHGLSMKHLRFVNKLR-LRRA 66
Query: 192 APPNEKPEIVKTHLXXMIIVP 254
A P++KP+IV+THL MII P
Sbjct: 67 AQPSQKPKIVRTHLRDMIIFP 87
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATTQLK 412
MVG +G+++G+ F VEI PEMIGH LG ++ T + V H PG+GAT K
Sbjct: 117 MVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHTGPGVGATRSSK 168
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 60.1 bits (139), Expect = 3e-08
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
V +++GIY+G F +V+IKPEMIGH L F+ + K VKH + G+GAT
Sbjct: 89 VDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSKAGVGAT 135
Score = 48.0 bits (109), Expect = 1e-04
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +3
Query: 30 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKK--EAPPN 203
R +TYRG LD L M + +EL+ K + L+ KL++A++ E
Sbjct: 10 RNYTYRGKTLDDLRAMELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAG 69
Query: 204 EKPEIVKTHLXXMIIVP 254
+P +VKTHL M+I+P
Sbjct: 70 VRPPVVKTHLRHMVILP 86
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 58.8 bits (136), Expect = 6e-08
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATTQLK 412
M+G++VG++ G + VEIKPEM+G L F+ T KHGRPGIGA++ K
Sbjct: 93 MIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSK 144
Score = 53.6 bits (123), Expect = 2e-06
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRA 182
E KKKR FR++TYRGV +++L MP ++ +L GL + + L+ A
Sbjct: 7 EVSKKKRTFRRYTYRGVPVEELEKMPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIAA 66
Query: 183 KKE-APPNEKPEIVKTHLXXMIIVP 254
K + KPE+V+TH II P
Sbjct: 67 KAACVSSSSKPEMVRTHARSAIIWP 91
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 58.0 bits (134), Expect = 1e-07
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATTQLK 412
M+G + ++NGK F VE++PEMIGH G F+ T V HG G+GAT K
Sbjct: 80 MIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGATRSSK 131
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
MVG + +YNG T+ V I P IGHYLG F++T K V+HG PG+ AT
Sbjct: 102 MVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKAT 149
Score = 48.4 bits (110), Expect = 9e-05
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +3
Query: 36 FTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKEAPPNEKPE 215
F YRG L++LL+M ++ ++L+ GLK + L+ K+R+AK+ A +K
Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKK-V 87
Query: 216 IVKTHLXXMIIVP 254
+++TH MII+P
Sbjct: 88 VIRTHCRDMIILP 100
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 54.0 bits (124), Expect = 2e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
M+G GIYNGK F ++++ E +G +LG + T V+HG PG+GAT
Sbjct: 105 MIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGAT 152
Score = 45.2 bits (102), Expect = 8e-04
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKEAPPNEKP 212
+F Y+G L++L +MP ++ ME++ G+ K LV K+++A++ +
Sbjct: 30 EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDA 89
Query: 213 EIVKTHLXXMIIVP 254
+++TH +I P
Sbjct: 90 RVIRTHCRDFVITP 103
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 52.4 bits (120), Expect = 5e-06
Identities = 27/43 (62%), Positives = 27/43 (62%)
Frame = -2
Query: 387 PGLPCFTGLYVTEXSPR*WPIISGLISTWLKVFPL*MPTIEPT 259
P PC TG YV SPR PIISGLIST L PL PT EPT
Sbjct: 22 PARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPT 64
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVK 373
VG+IV +YNGK F ++I EM+GH G F+ T K K
Sbjct: 63 VGNIVSVYNGKNFVNLKITDEMVGHKYGEFASTRKIAK 100
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/33 (63%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEI-KPEMIGHYLGXFS 352
M+G IVG+YNGKT NQV I KP+ I HYL S
Sbjct: 40 MIGYIVGVYNGKTLNQVGILKPKKICHYLTSLS 72
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 41.5 bits (93), Expect = 0.010
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATTQLK 412
VG IYNGK F ++I EM+GH G F+ T K G+ + + T++K
Sbjct: 37 VGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGKRALPSKTKIK 87
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 41.1 bits (92), Expect = 0.013
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYK 364
VG I+NGK +N+V I +M+GH LG FS T K
Sbjct: 49 VGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 40.3 bits (90), Expect = 0.023
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGR 382
M+G + ++NGK FN+V I EMIG+ LG FS T H +
Sbjct: 37 MIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 39.9 bits (89), Expect = 0.031
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
V + ++NGKTF + I PEM+GH LG F+ T
Sbjct: 104 VNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 39.5 bits (88), Expect = 0.041
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYK 364
VG + IYNGK +IKPEM+GH LG F T K
Sbjct: 40 VGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRK 74
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 39.1 bits (87), Expect = 0.054
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
MV + +YNGKTF + I +++GH LG FS T
Sbjct: 44 MVSLTISVYNGKTFIPIYITEDLVGHKLGEFSPT 77
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 38.3 bits (85), Expect = 0.095
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYK 364
MVG+ ++NGK++ V+I +MIGH LG F+ T K
Sbjct: 63 MVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 38.3 bits (85), Expect = 0.095
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
VG + ++NGKTF V I +M+GH LG F+ T
Sbjct: 170 VGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPT 202
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 37.5 bits (83), Expect = 0.17
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKH 376
+G V IYNG + ++IK +MIGH G F+ T K H
Sbjct: 40 IGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 37.5 bits (83), Expect = 0.17
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHG 379
MVG + ++NGK V + M+GH LG F+VT HG
Sbjct: 42 MVGITIAVHNGKNHIPVLVNENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 37.1 bits (82), Expect = 0.22
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGR 382
V S V IYNGKT + +I +GH G F+ T K KH +
Sbjct: 170 VDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 36.7 bits (81), Expect = 0.29
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKH 376
VG ++NGK F V I EMIGH G F+ T K H
Sbjct: 85 VGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 36.7 bits (81), Expect = 0.29
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFS 352
VG ++NGKT+N+V I EM+G LG FS
Sbjct: 24 VGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 35.5 bits (78), Expect = 0.67
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYK 364
VG I+NGK + +EI +M+GH LG F+ T K
Sbjct: 47 VGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 35.1 bits (77), Expect = 0.88
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFS 352
VG ++NGK ++ V I EM+GH LG FS
Sbjct: 92 VGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 34.3 bits (75), Expect = 1.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
M+G I+ ++NG+ V I EM+G LG F+ T
Sbjct: 61 MIGEIIAVHNGREHIPVYITEEMVGFKLGEFATT 94
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 272 VGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
V IYNG F ++I MIGH G FS+T
Sbjct: 42 VKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 33.5 bits (73), Expect = 2.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
M+G + ++NGK + I EM+GH LG F T
Sbjct: 44 MIGMTISVHNGKQHIPIFIGDEMVGHKLGEFVPT 77
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 33.5 bits (73), Expect = 2.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
M+G + ++NG+ V + EM+GH LG F+ T
Sbjct: 44 MIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPT 77
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 33.5 bits (73), Expect = 2.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
VG + +YNG+ V I M+GH LG FS T
Sbjct: 45 VGHKIAVYNGREHIPVYITENMVGHKLGEFSPT 77
>UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Rep:
AAA ATPase - Bacillus sp. B14905
Length = 569
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 266 SIVGIYNGKT-----FNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGATTQLKV 415
S+VG+ N K N ++I+ + H L F +TY V G PG G TT ++
Sbjct: 302 SLVGLPNAKKELHNLINFIKIQSLRVDHGLTSFPITYHLVFFGNPGTGKTTVARI 356
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 32.7 bits (71), Expect = 4.7
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKH 376
VG ++NGK + V + +M+G LG ++ T KP ++
Sbjct: 46 VGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 32.3 bits (70), Expect = 6.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
M+G +G+++G+ V + M+GH LG F+ T
Sbjct: 44 MIGHTIGVHDGRKHVPVFVTESMVGHKLGEFAPT 77
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 32.3 bits (70), Expect = 6.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
M+G + I+NG+ V I M+GH LG FS T
Sbjct: 44 MIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPT 77
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 31.9 bits (69), Expect = 8.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVT 358
+G + +Y+G+ V I+ +M+GH LG F+ T
Sbjct: 45 IGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPT 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,130,364
Number of Sequences: 1657284
Number of extensions: 6793859
Number of successful extensions: 13722
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 13417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13713
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -