BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30640.Seq
(499 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding pr... 23 5.8
AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding pr... 23 5.8
AJ420785-4|CAD12784.1| 395|Anopheles gambiae serpin protein. 23 5.8
AJ420785-3|CAD12783.1| 380|Anopheles gambiae serpin protein. 23 5.8
AJ420785-2|CAD12782.1| 382|Anopheles gambiae serpin protein. 23 5.8
AJ420785-1|CAD12781.1| 379|Anopheles gambiae serpin protein. 23 5.8
AJ271353-1|CAB69785.1| 380|Anopheles gambiae putative serine pr... 23 5.8
AJ271352-1|CAB69784.1| 379|Anopheles gambiae putative serine pr... 23 5.8
AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding pr... 23 5.8
>AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding
protein AgamOBP30 protein.
Length = 289
Score = 23.0 bits (47), Expect = 5.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 325 DRPLPRRXLSHVQACKAR*TRYRCYHTAQGS 417
DRP P H +AC+ +RCY+ G+
Sbjct: 135 DRPAP-----HDEACERAYESFRCYYEHYGN 160
>AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding
protein OBPjj83c protein.
Length = 273
Score = 23.0 bits (47), Expect = 5.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 325 DRPLPRRXLSHVQACKAR*TRYRCYHTAQGS 417
DRP P H +AC+ +RCY+ G+
Sbjct: 119 DRPAP-----HDEACERAYESFRCYYEHYGN 144
>AJ420785-4|CAD12784.1| 395|Anopheles gambiae serpin protein.
Length = 395
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQL 92
+ TY G D+ +L +PNE++
Sbjct: 225 ELTYGGSDMTMMLLLPNERM 244
>AJ420785-3|CAD12783.1| 380|Anopheles gambiae serpin protein.
Length = 380
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQL 92
+ TY G D+ +L +PNE++
Sbjct: 225 ELTYGGSDMTMMLLLPNERM 244
>AJ420785-2|CAD12782.1| 382|Anopheles gambiae serpin protein.
Length = 382
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQL 92
+ TY G D+ +L +PNE++
Sbjct: 225 ELTYGGSDMTMMLLLPNERM 244
>AJ420785-1|CAD12781.1| 379|Anopheles gambiae serpin protein.
Length = 379
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQL 92
+ TY G D+ +L +PNE++
Sbjct: 225 ELTYGGSDMTMMLLLPNERM 244
>AJ271353-1|CAB69785.1| 380|Anopheles gambiae putative serine
protease inhibitor protein.
Length = 380
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQL 92
+ TY G D+ +L +PNE++
Sbjct: 225 ELTYGGSDMTMMLLLPNERM 244
>AJ271352-1|CAB69784.1| 379|Anopheles gambiae putative serine
protease inhibitor protein.
Length = 379
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQL 92
+ TY G D+ +L +PNE++
Sbjct: 225 ELTYGGSDMTMMLLLPNERM 244
>AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding
protein 1 protein.
Length = 289
Score = 23.0 bits (47), Expect = 5.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 325 DRPLPRRXLSHVQACKAR*TRYRCYHTAQGS 417
DRP P H +AC+ +RCY+ G+
Sbjct: 135 DRPAP-----HDEACERAYESFRCYYEHYGN 160
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,190
Number of Sequences: 2352
Number of extensions: 6638
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -