Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30640.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p pro...   137   9e-33
AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB...   137   9e-33
AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA...   137   9e-33

>AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p
           protein.
          Length = 148

 Score =  137 bits (331), Expect = 9e-33
 Identities = 75/142 (52%), Positives = 81/142 (57%)
 Frame = +3

Query: 3   ETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRA 182
           E LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+ KLR+A
Sbjct: 7   ENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKA 66

Query: 183 KKEAPPNEKPEIVKTHLXXMIIVPXWSVQLSAFXXXXXXXXXXXXXXXXAIXXXXXXXXX 362
           KKEAPPNEKPEIVKTHL  MIIVP  +  +                              
Sbjct: 67  KKEAPPNEKPEIVKTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTY 126

Query: 363 XXXXXVDPVSVLPHSSRFIPLK 428
                  P     HSSRFIPLK
Sbjct: 127 KPVKHGRPGIGATHSSRFIPLK 148



 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = +2

Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
           M GSI+G+YNGK F QVE+KPEMIGHYLG F++TYKPVKHGRPGIGAT
Sbjct: 92  MTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGAT 139


>AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB,
           isoform B protein.
          Length = 147

 Score =  137 bits (331), Expect = 9e-33
 Identities = 75/142 (52%), Positives = 81/142 (57%)
 Frame = +3

Query: 3   ETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRA 182
           E LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+ KLR+A
Sbjct: 6   ENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKA 65

Query: 183 KKEAPPNEKPEIVKTHLXXMIIVPXWSVQLSAFXXXXXXXXXXXXXXXXAIXXXXXXXXX 362
           KKEAPPNEKPEIVKTHL  MIIVP  +  +                              
Sbjct: 66  KKEAPPNEKPEIVKTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTY 125

Query: 363 XXXXXVDPVSVLPHSSRFIPLK 428
                  P     HSSRFIPLK
Sbjct: 126 KPVKHGRPGIGATHSSRFIPLK 147



 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = +2

Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
           M GSI+G+YNGK F QVE+KPEMIGHYLG F++TYKPVKHGRPGIGAT
Sbjct: 91  MTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGAT 138


>AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA,
           isoform A protein.
          Length = 148

 Score =  137 bits (331), Expect = 9e-33
 Identities = 75/142 (52%), Positives = 81/142 (57%)
 Frame = +3

Query: 3   ETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRA 182
           E LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+ KLR+A
Sbjct: 7   ENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKA 66

Query: 183 KKEAPPNEKPEIVKTHLXXMIIVPXWSVQLSAFXXXXXXXXXXXXXXXXAIXXXXXXXXX 362
           KKEAPPNEKPEIVKTHL  MIIVP  +  +                              
Sbjct: 67  KKEAPPNEKPEIVKTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTY 126

Query: 363 XXXXXVDPVSVLPHSSRFIPLK 428
                  P     HSSRFIPLK
Sbjct: 127 KPVKHGRPGIGATHSSRFIPLK 148



 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = +2

Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGXFSVTYKPVKHGRPGIGAT 400
           M GSI+G+YNGK F QVE+KPEMIGHYLG F++TYKPVKHGRPGIGAT
Sbjct: 92  MTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGAT 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,781,838
Number of Sequences: 53049
Number of extensions: 319471
Number of successful extensions: 754
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)