Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30638.Seq
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   1.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.2  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   2.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.7  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   8.9  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 199 VGFE*RETQYLQVVNQH*TERGKEKIIFLYSTTTSITLVAAPTPSNKYYNSTST 360
           V F+ R  +  Q   QH  ++  EK   L + +  I    +PTP +   N+TST
Sbjct: 115 VWFKNRRAKCRQQQKQHNQQQSVEKSSKLKNKSAPILTKTSPTPVS-INNNTST 167


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 238 QLVDIVFLSTRNLLTPLNFINLVLLQLNIMVGKLLTH 128
           QLV I  L+T+   T  +F NL     ++M+  L T+
Sbjct: 329 QLVAIRLLNTKLQFTAKDFFNLDWTFCHMMIAALTTY 365


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -3

Query: 181 INLVLLQLNIMVGKLLTHSFTSYLMKVLISSINYYTPTLQNVCMY 47
           ++ ++ QLN   G +L   FTS+ + +++S        + N  M+
Sbjct: 222 LSKLIKQLNATYGLILLLMFTSHFIFIVVSIFYMSAYLISNPIMW 266


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 259 RGKEKIIFLYSTTTSITLVAAPTPSNKYYNSTSTKPVP 372
           R  E ++ L  +T S +  + P+PS     ST+  P P
Sbjct: 112 RSLEDLLALDESTVSSSTSSIPSPSTTDDLSTNPTPPP 149


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 479 DISKANETNVPKRSL 523
           D+SK  ETN+ K +L
Sbjct: 311 DLSKTKETNLEKSNL 325


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 479 DISKANETNVPKRSL 523
           D+SK  ETN+ K +L
Sbjct: 203 DLSKTKETNLEKSNL 217


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 328 PSNKYYNSTSTKP 366
           PS+ YYN TS  P
Sbjct: 18  PSDNYYNYTSDIP 30


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 328 PSNKYYNSTSTKP 366
           PS+ YYN TS  P
Sbjct: 18  PSDNYYNYTSDIP 30


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 328 PSNKYYNSTSTKP 366
           PS+ YYN TS  P
Sbjct: 18  PSDNYYNYTSDIP 30


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 489 KPTKRTYPSVH 521
           K T R YPSVH
Sbjct: 53  KETLRLYPSVH 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,274
Number of Sequences: 336
Number of extensions: 2263
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)