Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30636.Seq
(748 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 268 3e-74
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 268 3e-74
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 267 9e-74
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 258 5e-71
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 36 5e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 24 1.7
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.0
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 3.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.3
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.0
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 7.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 7.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 7.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 7.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 7.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 7.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 7.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 7.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 7.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 7.0
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 9.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.3
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.3
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 268 bits (658), Expect = 3e-74
Identities = 130/164 (79%), Positives = 140/164 (85%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 16 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 75
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 616
TREHALLAFTLGVKQLIVGVNKMD + +++ +++GYNPAAVAFVP
Sbjct: 76 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 135
Query: 617 ISGWHGDNMLEPSTKMPWVQGDGQVERKEGKADGKCLIEALDAI 748
ISGWHGDNMLE S+KMPW +G VERKEGK +GKCLIEALDAI
Sbjct: 136 ISGWHGDNMLEVSSKMPWFKG-WTVERKEGKVEGKCLIEALDAI 178
Score = 27.5 bits (58), Expect = 0.14
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 214 WVLDKLKAERE 246
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 268 bits (658), Expect = 3e-74
Identities = 130/164 (79%), Positives = 140/164 (85%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 73 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 616
TREHALLAFTLGVKQLIVGVNKMD + +++ +++GYNPAAVAFVP
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 192
Query: 617 ISGWHGDNMLEPSTKMPWVQGDGQVERKEGKADGKCLIEALDAI 748
ISGWHGDNMLE S+KMPW +G VERKEGK +GKCLIEALDAI
Sbjct: 193 ISGWHGDNMLEVSSKMPWFKG-WTVERKEGKVEGKCLIEALDAI 235
Score = 145 bits (352), Expect = 3e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 267 bits (654), Expect = 9e-74
Identities = 129/163 (79%), Positives = 139/163 (85%)
Frame = +2
Query: 260 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 439
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 440 REHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVPI 619
REHALLAFTLGVKQLIVGVNKMD + +++ +++GYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 620 SGWHGDNMLEPSTKMPWVQGDGQVERKEGKADGKCLIEALDAI 748
SGWHGDNMLE S+KMPW +G VERKEGK +GKCLIEALDAI
Sbjct: 121 SGWHGDNMLEVSSKMPWFKG-WTVERKEGKVEGKCLIEALDAI 162
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 258 bits (631), Expect = 5e-71
Identities = 125/164 (76%), Positives = 138/164 (84%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQ
Sbjct: 73 IDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 616
TREHALLAFTLGVKQLIVGVNKMD + + +++ +++GYN A+VAFVP
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVP 192
Query: 617 ISGWHGDNMLEPSTKMPWVQGDGQVERKEGKADGKCLIEALDAI 748
ISGWHGDNMLEPS K PW +G +VERK+G ADGK LIEALDAI
Sbjct: 193 ISGWHGDNMLEPSPKTPWYKG-WKVERKDGNADGKTLIEALDAI 235
Score = 145 bits (352), Expect = 3e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.5 bits (78), Expect = 5e-04
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +2
Query: 299 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 478
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 479 QLIVGVNKMDPLN 517
+IV +NK+D N
Sbjct: 247 PIIVAINKIDKPN 259
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKST 108
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 64 INIVVIGHVDSGKST 108
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 632 RAIQKWARKRQQLGCSPIFLMYEDTSFLISSNLGS 528
+A +KWA + C L +DT ++ +LGS
Sbjct: 652 QAFRKWAADTFAVACETFCLDDDDTLLEVALSLGS 686
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 56 FSLPIFG*SRITNCV*Y 6
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.0 bits (47), Expect = 3.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 464 TLGVKQLIVGVNKMDPLNHHTVSPDL 541
T+ VK I V +DP+ SPDL
Sbjct: 15 TMSVKNEISTVEPVDPVKSLVCSPDL 40
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 284 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 385
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 284 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 385
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 5.3
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -1
Query: 415 SFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDWIPTHAQ 236
+F+ G + E+ I+++ + D ++SV R + + ESNI W P Q
Sbjct: 348 AFDDNGDRIFAEYDIINIQENGD----QVSVGRYFYPNGTEKMTLSVNESNITW-PGRLQ 402
Query: 235 --PLVCPIPKHI 206
P IP H+
Sbjct: 403 TKPEGFMIPTHL 414
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 478 TAHRRSKQNGSTEPPYSEPRFEEIKKEV 561
T+ R++ S PP ++PR E + + V
Sbjct: 725 TSLERTQPTMSQMPPTAQPRMERLAEAV 752
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 90 IPVPVYYGNFPPRPIMVRPWVPMRGQV 116
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 90 IPVPVYYGNFPPRPIMVRPWVPMRGQV 116
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 90 IPVPVYYGNFPPRPIMVRPWVPMRGQV 116
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 90 IPVPVYYGNFPPRPIMVRPWVPMRGQV 116
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 90 IPVPVYYGNFPPRPIMVRPWVPMRGQV 116
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 90 IPVPVYYGNFPPRPIMVRPWVPMRGQV 116
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 90 IPVPVYYGNFPPRPIMVRPWVPMRGQV 116
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 339 IPVPVYYGNFPPRPIMVRPWVPMRGQV 365
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 339 IPVPVYYGNFPPRPIMVRPWVPMRGQV 365
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 339 IPVPVYYGNFPPRPIMVRPWVPMRGQV 365
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 339 IPVPVYYGNFPPRPIMVRPWVPMRGQV 365
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 339 IPVPVYYGNFPPRPIMVRPWVPMRGQV 365
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 339 IPVPVYYGNFPPRPIMVRPWVPMRGQV 365
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 323 IPVPVYYGNFPPRPIMVRPWVPMRGQV 349
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 611 VPISGWHGDNMLEPSTKMPWVQGDGQV 691
+P+ ++G+ P PWV GQV
Sbjct: 339 IPVPVYYGNFPPRPIMVRPWVPMRGQV 365
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 298 IVLASFELPESNIDWIPTHAQPLVCPIPKHI*RILY 191
IV+ FE+ +S D A IP ++ R+L+
Sbjct: 54 IVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLH 89
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 661 FG*RLQHVVSVPSRNGHESDSSWV 590
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 193 KGSFKYAWVLDKLKAERESVS 255
KGS W LD A E +S
Sbjct: 209 KGSIARCWSLDSTAASDEDIS 229
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,227
Number of Sequences: 438
Number of extensions: 4683
Number of successful extensions: 52
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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