Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30634.Seq
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051A21B Cluster: PREDICTED: similar to CG3862-PA;...    84   4e-15
UniRef50_Q16W91 Cluster: Regulator of chromosome condensation; n...    79   8e-14
UniRef50_Q9VPU0 Cluster: CG3862-PA; n=3; Sophophora|Rep: CG3862-...    78   2e-13
UniRef50_UPI0000D56F40 Cluster: PREDICTED: similar to CG3862-PA;...    76   1e-12
UniRef50_UPI0000E46979 Cluster: PREDICTED: hypothetical protein;...    72   2e-11
UniRef50_Q96I51 Cluster: Williams-Beuren syndrome chromosome reg...    63   7e-09
UniRef50_Q5C3M7 Cluster: SJCHGC05517 protein; n=1; Schistosoma j...    47   4e-04
UniRef50_UPI000150A161 Cluster: hypothetical protein TTHERM_0047...    34   3.9  
UniRef50_A7AXP9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_A4SDW6 Cluster: HipA domain protein; n=6; Bacteroidetes...    33   6.7  
UniRef50_A4YED5 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ...    33   6.7  

>UniRef50_UPI000051A21B Cluster: PREDICTED: similar to CG3862-PA;
           n=2; Apocrita|Rep: PREDICTED: similar to CG3862-PA -
           Apis mellifera
          Length = 443

 Score = 83.8 bits (198), Expect = 4e-15
 Identities = 40/93 (43%), Positives = 61/93 (65%)
 Frame = +2

Query: 218 PVSNKQKYRQTSHVWGFAETGALGIHLPRGKKGXKSYKNNFKLVWHPMRSSFAERFDITN 397
           P+SN++ +R   +VWG A+ GALG            Y+     +  P R SF ER D+TN
Sbjct: 41  PISNERDHRV--YVWGMADHGALGT------LKSTVYEKGISYIPKPKRLSFGERHDVTN 92

Query: 398 IACGYGFTVASIKTSEQHKVFGTGINTDSQIGY 496
           IACGYGFT  ++++++++ +FG+GINTDSQ+G+
Sbjct: 93  IACGYGFTAFAVRSNDKNILFGSGINTDSQLGF 125


>UniRef50_Q16W91 Cluster: Regulator of chromosome condensation; n=2;
           Culicidae|Rep: Regulator of chromosome condensation -
           Aedes aegypti (Yellowfever mosquito)
          Length = 456

 Score = 79.4 bits (187), Expect = 8e-14
 Identities = 40/82 (48%), Positives = 54/82 (65%)
 Frame = +2

Query: 254 HVWGFAETGALGIHLPRGKKGXKSYKNNFKLVWHPMRSSFAERFDITNIACGYGFTVASI 433
           +VWG A TGALG+     KK  K++ +   +V HP R +FAE  DI ++A GYGF+V + 
Sbjct: 52  YVWGLAATGALGLQTSV-KKQAKAHTD---VVQHPSRLNFAENRDIVDVAAGYGFSVFAA 107

Query: 434 KTSEQHKVFGTGINTDSQIGYH 499
           K      ++GTGINTD+QIGYH
Sbjct: 108 KCRHGKSLWGTGINTDAQIGYH 129


>UniRef50_Q9VPU0 Cluster: CG3862-PA; n=3; Sophophora|Rep: CG3862-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 454

 Score = 77.8 bits (183), Expect = 2e-13
 Identities = 36/81 (44%), Positives = 53/81 (65%)
 Frame = +2

Query: 254 HVWGFAETGALGIHLPRGKKGXKSYKNNFKLVWHPMRSSFAERFDITNIACGYGFTVASI 433
           +VWGF ETGALG+     KK  + Y    ++V HP R  F+   +IT++A GYGFTV ++
Sbjct: 47  YVWGFQETGALGLQT-NVKKAKERYT---EMVHHPTRLQFSNNNEITDVAAGYGFTVYAV 102

Query: 434 KTSEQHKVFGTGINTDSQIGY 496
              +   +FG+G+NTDSQ+G+
Sbjct: 103 NRDDGETLFGSGLNTDSQLGF 123


>UniRef50_UPI0000D56F40 Cluster: PREDICTED: similar to CG3862-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG3862-PA - Tribolium castaneum
          Length = 477

 Score = 75.8 bits (178), Expect = 1e-12
 Identities = 39/96 (40%), Positives = 56/96 (58%)
 Frame = +2

Query: 224 SNKQKYRQTSHVWGFAETGALGIHLPRGKKGXKSYKNNFKLVWHPMRSSFAERFDITNIA 403
           ++K+ Y++   VWG   +GALGI   R  +     +     V  P R  FAE+F +T  A
Sbjct: 74  TSKKSYKRV-FVWGNLMSGALGIPYLRRNENVMHRET----VDIPKRLGFAEKFPVTTAA 128

Query: 404 CGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPRE 511
           CG+GFT   + T  + K++GTG+NTDSQIG H  R+
Sbjct: 129 CGFGFTAFGVDTESEDKLYGTGLNTDSQIGRHEVRQ 164


>UniRef50_UPI0000E46979 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 455

 Score = 71.7 bits (168), Expect = 2e-11
 Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
 Frame = +2

Query: 215 IPVSNKQKYRQTS-HVWGFAETGALGI---HLPRGKKGXKSYKNNFKLVWHPMRSSFAER 382
           + +  K + R TS +VWGF  TGALG+     P  +K        F+ +  P +  F E+
Sbjct: 13  VQMVGKHRKRYTSVYVWGFTYTGALGVPSYFFPSQRKNPIRKPKKFQPI--PYKLKFDEK 70

Query: 383 FDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYH 499
             IT  ACGYGF++    T +  KV+G GINT+SQIGYH
Sbjct: 71  --ITTAACGYGFSLIGSHTQDTSKVWGMGINTNSQIGYH 107


>UniRef50_Q96I51 Cluster: Williams-Beuren syndrome chromosome region
           16 protein; n=30; Deuterostomia|Rep: Williams-Beuren
           syndrome chromosome region 16 protein - Homo sapiens
           (Human)
          Length = 464

 Score = 62.9 bits (146), Expect = 7e-09
 Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
 Frame = +2

Query: 257 VWGFAETGALGIH---LPRGKKGXKSYKNNFKLVWH-PMRSSFAERFDITNIACGYGFTV 424
           VWGF+ +GALG+    +P    G ++     + +   P R    ++  I++ ACGYGFT+
Sbjct: 63  VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120

Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHSPRE 511
            S KT++  KV+G G+N DSQ+G+H  R+
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRK 149


>UniRef50_Q5C3M7 Cluster: SJCHGC05517 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05517 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 279

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +2

Query: 203 AFTNIPVSNKQKYRQTSHVWGFAETGALGIHLPRGKKGXKSYKNNFKLVWHPMRSSFAER 382
           A  N+   +  K +Q  +V+GF  TGALG     G++G    K     V HP+       
Sbjct: 36  AVYNVHSRDSLKSKQV-YVFGFTATGALGNKTYLGQRG----KPGIVGVSHPVPLKCLSS 90

Query: 383 FDIT-NIACGYGFTVASIKTSE-QHKVFGTGINTDSQIGYHS 502
             I    ACGYGFT    + S     V+G GIN+D Q+G  S
Sbjct: 91  LGIPIKAACGYGFTTYICEGSNGDFGVYGCGINSDGQLGSQS 132


>UniRef50_UPI000150A161 Cluster: hypothetical protein
           TTHERM_00473300; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00473300 - Tetrahymena
           thermophila SB210
          Length = 298

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +3

Query: 96  NMYAAKFLIHRRSPV--FLLNRVSITTKKKVHDPSEEELLPIFQYPISKS 239
           N++ +  LI + S +  FLLN + +TTK K+ D S E+    +  PISK+
Sbjct: 20  NIFISLALIPQTSFIHSFLLNTIPLTTKMKIQDDSFEQSPQSYSKPISKT 69


>UniRef50_A7AXP9 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus gnavus ATCC 29149|Rep: Putative
           uncharacterized protein - Ruminococcus gnavus ATCC 29149
          Length = 160

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 311 KGXKSYKNNFKLVWHPMRSSFAERFDITNIACGYGFTVASIKTSEQHKV 457
           K    YK   K +WHPM  +  ++ ++ +  CG   TV  ++T ++ KV
Sbjct: 84  KDGLEYKEGMKFIWHPMNRA-TKQVEVEHPHCGKIVTVIGLETMDRVKV 131


>UniRef50_A4SDW6 Cluster: HipA domain protein; n=6;
           Bacteroidetes/Chlorobi group|Rep: HipA domain protein -
           Prosthecochloris vibrioformis DSM 265
          Length = 318

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 535 SYAPIYIPYKSLECEIXAVAAGRAHTIIPGPTKKVSIH 648
           S  P  +PY   E E  A+   R H  IPG   K+S+H
Sbjct: 30  SVTPPILPYDETELEALALTVVRNHVTIPGVQPKLSLH 67


>UniRef50_A4YED5 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
           domain protein; n=1; Metallosphaera sedula DSM 5348|Rep:
           4Fe-4S ferredoxin, iron-sulfur binding domain protein -
           Metallosphaera sedula DSM 5348
          Length = 752

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +2

Query: 275 TGALGIHLPRGKKGXKSYKNNFKLVWHPMRSSFAERFDITNIACGYGFTVASIKTSEQHK 454
           TG +G  +     G  SYK  F + +  +   F ++F ++ +   YG  V   +TSE+ K
Sbjct: 106 TGTVGGFVATNGSGFGSYKFGF-VNYKKIVHEFKDKFTVSLLTVNYGELV---ETSEESK 161

Query: 455 VFGTGINTDSQIGYHSP 505
              TGI  D +  Y+ P
Sbjct: 162 FSWTGIFRDGKEVYYVP 178


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,819,024
Number of Sequences: 1657284
Number of extensions: 14271421
Number of successful extensions: 33696
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 32558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33675
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)