BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= psV30634.Seq (698 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 31 0.79 Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 29 2.4 U37430-2|AAL08045.2| 802|Caenorhabditis elegans Hypothetical pr... 29 4.2 U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 28 5.6 AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 28 5.6 Z82080-8|CAD92382.3| 404|Caenorhabditis elegans Hypothetical pr... 28 7.4 U00047-12|AAA50685.1| 332|Caenorhabditis elegans Nuclear hormon... 28 7.4 AL032625-7|CAN86642.1| 404|Caenorhabditis elegans Hypothetical ... 28 7.4 AL023854-1|CAH60790.2| 404|Caenorhabditis elegans Hypothetical ... 28 7.4 Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z68299-5|CAI46584.1| 111|Caenorhabditis elegans Hypothetical pr... 27 9.8 >U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein F40H6.5 protein. Length = 1288 Score = 31.1 bits (67), Expect = 0.79 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = +2 Query: 206 FTNIPVSNKQKYRQTSHVWGFAETGALGIHLP-RGKKGXKSYKNNFKLVWHPMRSSFAER 382 + N SN Y + ++G T A+ +H+ R + NNF W P E Sbjct: 1035 WNNATESNVNFYLGFNPLFG---TTAVPVHISQRWSSSARIIYNNFWGQWGP------EA 1085 Query: 383 FDITNIACGYGFTVASIKTSEQHKVFGTG 469 F G F ++ IKT+ H+++G G Sbjct: 1086 FSARPFTRGQPFVISLIKTANSHQIYGNG 1114 >Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein C38D4.3 protein. Length = 1784 Score = 29.5 bits (63), Expect = 2.4 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = -3 Query: 600 SRCHCXNLTLQALVRYINRCIAKQKFQRMISRGEWYPIWESVLIPVPKTL--CCSEVFIE 427 +R + +L +Q++VR +NR +F I EWYP P P L C V I Sbjct: 699 ARKNSSSLPVQSVVRKMNRQAPNAQFWNDIPHDEWYP-------PTPLDLLECLLNVSIS 751 Query: 426 ATVKP*PQAMFVISNLSAKED 364 ++K +VI +S + Sbjct: 752 ESIKRELVVQYVIDWISTSPE 772 >U37430-2|AAL08045.2| 802|Caenorhabditis elegans Hypothetical protein K09F5.6 protein. Length = 802 Score = 28.7 bits (61), Expect = 4.2 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +1 Query: 391 NKHSLWLRFHSSLNKNFRAAQSFRYRYQYRFPNWIPFTTRNHPLELLLSYAPIYI 555 N S+W ++L +++ F +YR N I + T +P L++YA IY+ Sbjct: 11 NLSSIWYTILTTLLQSYLLYLGFE---RYRLYNEIKWPTGGYPYGYLMAYATIYL 62 >U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 preproprotein protein. Length = 1042 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 660 ACYLMYRHLLCRSRNYCVSTSRCHCXN 580 AC LLC +C +T+RC C N Sbjct: 665 ACPTNNLALLCSGHGHCTTTARCVCFN 691 >AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical protein Y37D8A.13 protein. Length = 1042 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 660 ACYLMYRHLLCRSRNYCVSTSRCHCXN 580 AC LLC +C +T+RC C N Sbjct: 665 ACPTNNLALLCSGHGHCTTTARCVCFN 691 >Z82080-8|CAD92382.3| 404|Caenorhabditis elegans Hypothetical protein W09G3.7a protein. Length = 404 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +2 Query: 356 PMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIG 493 P R ++ I I+ G+GF++ + K ++++G GIN QIG Sbjct: 57 PKRIAYFNTKSIKFISSGFGFSLFASK----NRLYGAGINNRFQIG 98 >U00047-12|AAA50685.1| 332|Caenorhabditis elegans Nuclear hormone receptor familyprotein 9 protein. Length = 332 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = -3 Query: 660 ACYLMYRHL-LCRSRNYCVSTSRCHCXNLTLQALVRYINRCI 538 AC + +R L +S +C++ C NL L N+C+ Sbjct: 33 ACKMFFRRATLGKSEKFCINNDNCDTSNLILTCRQCRYNKCL 74 >AL032625-7|CAN86642.1| 404|Caenorhabditis elegans Hypothetical protein W09G3.7a protein. Length = 404 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +2 Query: 356 PMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIG 493 P R ++ I I+ G+GF++ + K ++++G GIN QIG Sbjct: 57 PKRIAYFNTKSIKFISSGFGFSLFASK----NRLYGAGINNRFQIG 98 >AL023854-1|CAH60790.2| 404|Caenorhabditis elegans Hypothetical protein W09G3.7a protein. Length = 404 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +2 Query: 356 PMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIG 493 P R ++ I I+ G+GF++ + K ++++G GIN QIG Sbjct: 57 PKRIAYFNTKSIKFISSGFGFSLFASK----NRLYGAGINNRFQIG 98 >Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical protein F10C2.3 protein. Length = 604 Score = 27.5 bits (58), Expect = 9.8 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -3 Query: 666 PYACYLMYRHLLCRSRNYCVSTSRCHCXNLTLQALVRYINRCIAKQKF 523 PY + + ++ RSRN C R H NL L L +++++ + KF Sbjct: 297 PYWLNVYWTYVHRRSRNLCYGNHRMH--NLQLNYLSQFVSKYKDQPKF 342 >Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical protein F10C2.3 protein. Length = 604 Score = 27.5 bits (58), Expect = 9.8 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -3 Query: 666 PYACYLMYRHLLCRSRNYCVSTSRCHCXNLTLQALVRYINRCIAKQKF 523 PY + + ++ RSRN C R H NL L L +++++ + KF Sbjct: 297 PYWLNVYWTYVHRRSRNLCYGNHRMH--NLQLNYLSQFVSKYKDQPKF 342 >Z68299-5|CAI46584.1| 111|Caenorhabditis elegans Hypothetical protein T04B2.8 protein. Length = 111 Score = 27.5 bits (58), Expect = 9.8 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +3 Query: 24 FALNTLDYYRYNLFFDCGMLGNLI 95 F L L+ + +NL F CG LG L+ Sbjct: 6 FGLEALNTFYFNLVFLCGFLGYLV 29 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,553,156 Number of Sequences: 27780 Number of extensions: 354721 Number of successful extensions: 978 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 978 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1613473434 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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