Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30631.Seq
(409 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 166 1e-40
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 138 4e-32
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 127 1e-28
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 125 3e-28
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 117 8e-26
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 107 8e-23
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 106 2e-22
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 91 1e-17
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 89 4e-17
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 87 2e-16
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 85 4e-16
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 79 3e-14
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 76 3e-13
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 71 9e-12
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 64 8e-10
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 62 4e-09
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 62 6e-09
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 58 5e-08
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 55 5e-07
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 50 2e-05
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 49 3e-05
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 47 1e-04
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 44 0.001
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 44 0.001
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 44 0.001
UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1; Ostreo... 40 0.015
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.015
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 40 0.015
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 40 0.015
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 40 0.019
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 40 0.025
UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1; Encepha... 38 0.059
UniRef50_Q9HM17 Cluster: 50S ribosomal protein L31e; n=3; Thermo... 34 0.96
UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA hel... 33 2.2
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 2.9
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf... 33 2.9
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 32 5.1
UniRef50_A3H875 Cluster: Ribosomal protein L31e; n=1; Caldivirga... 31 6.8
UniRef50_A2ELE1 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 166 bits (404), Expect = 1e-40
Identities = 77/78 (98%), Positives = 78/78 (100%)
Frame = +3
Query: 24 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 204 VDTRLNKFLWSKGVRNVP 257
VDTRLNKFLWSKGVRNVP
Sbjct: 61 VDTRLNKFLWSKGVRNVP 78
Score = 70.5 bits (165), Expect = 1e-11
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 293 DDEDSAHKXFTLVTYVPVASIKGLQTENVDASQE 394
DDEDSAHK FTLVTYVPVASIKGLQTENVDASQE
Sbjct: 91 DDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 138 bits (334), Expect = 4e-32
Identities = 61/78 (78%), Positives = 73/78 (93%), Gaps = 1/78 (1%)
Frame = +3
Query: 27 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 204 VDTRLNKFLWSKGVRNVP 257
+DTRLNK +W+KG+RNVP
Sbjct: 64 IDTRLNKAVWAKGIRNVP 81
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 293 DDEDSAHKXFTLVTYVPVASIKGLQTENVD 382
+DEDS +K +TLVTYVPV + K LQT NVD
Sbjct: 94 EDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 127 bits (306), Expect = 1e-28
Identities = 56/78 (71%), Positives = 68/78 (87%)
Frame = +3
Query: 24 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 204 VDTRLNKFLWSKGVRNVP 257
+DTRLNK +WSKG+R+ P
Sbjct: 61 IDTRLNKHIWSKGIRSTP 78
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +2
Query: 293 DDEDSAHKXFTLVTYVPVASIKGLQTENVDASQE 394
DDEDS +K +T VTYVPV++ K LQTENV++S +
Sbjct: 91 DDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 125 bits (302), Expect = 3e-28
Identities = 56/78 (71%), Positives = 68/78 (87%)
Frame = +3
Query: 24 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
MAK K E+K KSAINEVVTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1 MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60
Query: 204 VDTRLNKFLWSKGVRNVP 257
+DTRLNK LW +G+RN P
Sbjct: 61 IDTRLNKALWHRGIRNPP 78
Score = 50.8 bits (116), Expect = 1e-05
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = +2
Query: 293 DDEDSAHKXFTLVTYVPVASIKGLQTENVDASQE 394
DDEDS +K +TLVTYVPV++ K LQTENV+++++
Sbjct: 91 DDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 117 bits (282), Expect = 8e-26
Identities = 48/60 (80%), Positives = 58/60 (96%)
Frame = +3
Query: 78 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 257
TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP
Sbjct: 60 TREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVP 119
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 107 bits (257), Expect = 8e-23
Identities = 48/72 (66%), Positives = 59/72 (81%)
Frame = +3
Query: 42 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 221
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LN
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 222 KFLWSKGVRNVP 257
K +WSKG+R P
Sbjct: 61 KQIWSKGIRGPP 72
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 106 bits (254), Expect = 2e-22
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = +3
Query: 30 KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 209
K + +K +SA+N+VVTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D+R+D
Sbjct: 55 KSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLD 114
Query: 210 TRLNKFLWSKGVRNVP 257
+LN+ +W GV+N P
Sbjct: 115 PKLNQEVWKYGVKNFP 130
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 90.6 bits (215), Expect = 1e-17
Identities = 43/77 (55%), Positives = 57/77 (74%)
Frame = +3
Query: 75 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 254
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W+KG NV
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 255 PSVSV*GFHEDVMMMKI 305
V + GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 88.6 bits (210), Expect = 4e-17
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +3
Query: 90 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 257
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF+WS G+RN+P
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIP 67
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 86.6 bits (205), Expect = 2e-16
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +3
Query: 27 AKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 206
AK G++KG SAINE+VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ +
Sbjct: 4 AKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVI 63
Query: 207 DT 212
T
Sbjct: 64 CT 65
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 85.4 bits (202), Expect = 4e-16
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +3
Query: 42 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 209
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 79.0 bits (186), Expect = 3e-14
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +3
Query: 78 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 257
T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF+WSKG+RN P
Sbjct: 39 TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKFIWSKGIRNPP 98
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 75.8 bits (178), Expect = 3e-13
Identities = 38/80 (47%), Positives = 52/80 (65%)
Frame = +3
Query: 15 KITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP 194
K+ KP E K K +TRE T+++HK LH FKKRAP+AIK IR A K M T
Sbjct: 28 KVGNKKPSKEIKAKEMAP--ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTH 85
Query: 195 DIRVDTRLNKFLWSKGVRNV 254
+++ D LN+F+WS+G+R+V
Sbjct: 86 NVKFDMGLNQFIWSQGIRSV 105
Score = 35.9 bits (79), Expect = 0.31
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 299 EDSAHKXFTLVTYVPVASIKGLQTENVDASQ 391
E K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 119 EGEEGKFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 70.9 bits (166), Expect = 9e-12
Identities = 28/43 (65%), Positives = 38/43 (88%)
Frame = +3
Query: 129 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 257
+K RA+K+IRKFA K++GTPD+R+DTRLNK +W+KG+RNVP
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAKGIRNVP 131
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 293 DDEDSAHKXFTLVTYVPVASIKGLQTENVD 382
+DEDS +K +TLVTYVPV ++K LQT NVD
Sbjct: 144 EDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 64.5 bits (150), Expect = 8e-10
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3
Query: 147 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 257
A IRKFA K+MGTPD+R+DTRLNK +WSKGVRNVP
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKAVWSKGVRNVP 47
Score = 48.0 bits (109), Expect = 7e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2
Query: 293 DDEDSAHKXFTLVTYVPVASIKGLQTENVD 382
+DEDS +K +TLVTYVPV + KGLQT NVD
Sbjct: 60 EDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 62.1 bits (144), Expect = 4e-09
Identities = 36/61 (59%), Positives = 39/61 (63%)
Frame = -1
Query: 253 TFLTPLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVT 74
T LT L Q F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVT
Sbjct: 17 TPLTLLFQIAWFNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVT 76
Query: 73 T 71
T
Sbjct: 77 T 77
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 61.7 bits (143), Expect = 6e-09
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +3
Query: 69 EVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVR 248
+ V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN ++W KGV+
Sbjct: 82 DAVSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTYIWHKGVK 141
Query: 249 NVP 257
VP
Sbjct: 142 GVP 144
Score = 31.5 bits (68), Expect = 6.8
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 299 EDSAHKXF-TLVTYVPVASIKGLQTENVD 382
E + HK F T+++ VPVAS KGL T+ V+
Sbjct: 159 EGNKHKHFYTVISNVPVASFKGLTTKTVE 187
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 58.4 bits (135), Expect = 5e-08
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +3
Query: 75 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 254
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F+WS+G+R+V
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSRGIRHV 62
Query: 255 P 257
P
Sbjct: 63 P 63
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 55.2 bits (127), Expect = 5e-07
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +3
Query: 123 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRN 251
GF++ P +KEIRKFA K+MGTPD+ +D NK + ++G+RN
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRN 91
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/60 (35%), Positives = 38/60 (63%)
Frame = +3
Query: 81 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPS 260
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ +W +G++ P+
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPPA 68
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 49.2 bits (112), Expect = 3e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +3
Query: 96 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPS 260
N+HKR+ G F KR AIKEI+KFA K +IR++ LN + S G N P+
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPPN 69
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 84 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPS 260
EYTVNL K + KR +A+K +++F + +++ LNKF+W +G R P+
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPPT 60
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 87 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSKGVRNVPS 260
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +LWS + P+
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPPA 68
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 87 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPS 260
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ +W +G+ PS
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPPS 68
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 44.0 bits (99), Expect = 0.001
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 224
GK A + V + YT+ L + + V KRA RA+KE+R F + M T +++D +N+
Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61
Query: 225 FLWSKGVRNVP 257
LW KG P
Sbjct: 62 CLWEKGCEKPP 72
>UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1;
Ostreococcus tauri|Rep: 60S ribosomal protein L31a -
Ostreococcus tauri
Length = 95
Score = 40.3 bits (90), Expect = 0.015
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 183 MGTPDIRVDTRLNKFLWSKGVRNV 254
M T D+R+D +LNK +WSKG+RNV
Sbjct: 1 MKTSDVRIDVKLNKAVWSKGIRNV 24
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 40.3 bits (90), Expect = 0.015
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3
Query: 66 NEVVTREYTVNLHKRLHG 119
+EVVTREYT+NLHKRLHG
Sbjct: 13 DEVVTREYTINLHKRLHG 30
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 40.3 bits (90), Expect = 0.015
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 81 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 257
R YT+ L K L +RA RAI I++FA M +IR+D ++ +W +G+++ P
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLRGIKSPP 64
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
Archaeoglobus fulgidus
Length = 88
Score = 40.3 bits (90), Expect = 0.015
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 72 VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSKGV 245
VV R Y++ L ++ RA +A K +RKF + M ++++DT +N+ +W +G
Sbjct: 5 VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERGA 64
Query: 246 RNVPS 260
P+
Sbjct: 65 EKPPT 69
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 39.9 bits (89), Expect = 0.019
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 129 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 257
KKR + + A K M T D+R+D LN+ +W++G+RN+P
Sbjct: 286 KKRPQKLSLILLISARKNMLTEDVRIDPSLNEAVWARGIRNLP 328
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 39.5 bits (88), Expect = 0.025
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 87 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPS 260
Y VNL +R++ +RA RA++ +R+F + ++ +D LN ++WS+ P+
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPPA 65
>UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L31
- Encephalitozoon cuniculi
Length = 111
Score = 38.3 bits (85), Expect = 0.059
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 57 SAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP-DIRVDTRLNKFLW 233
S I E T E TVNL + + + K+A + ++ +++ +K + V LN FL+
Sbjct: 3 SKIEENQTVEMTVNLRRICSRLPWTKKASKVVRMLKREIQKHFREEIGVVVTNDLNNFLY 62
Query: 234 SKGVRNVPS 260
S+G++ +P+
Sbjct: 63 SRGIKKIPN 71
>UniRef50_Q9HM17 Cluster: 50S ribosomal protein L31e; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L31e -
Thermoplasma acidophilum
Length = 89
Score = 34.3 bits (75), Expect = 0.96
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 66 NEVVTREYTVNLHKR-LHGVGFKKRAPRAIKEIRKFAEKQMGTPD--IRVDTRLNKFLWS 236
+E V +E +N+ R K+RA A+ +R F K+M I +D ++++ +W
Sbjct: 3 DETVAQEVIINVPLRDAKASSRKRRADTAVSILRNFVSKKMKIDKGKIWIDPKVSEKIWE 62
Query: 237 KGVRNVPS 260
+G ++PS
Sbjct: 63 RGREHIPS 70
>UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA
helicase ruvA; n=6; Actinomycetales|Rep: Holliday
junction ATP-dependent DNA helicase ruvA - Streptomyces
avermitilis
Length = 203
Score = 33.1 bits (72), Expect = 2.2
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 9 KLKITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKR-APRAIKEIRKFAEKQM 185
+LK + +P G G AI VT + LH L G+G+ R A A+ + AE
Sbjct: 126 ELKDRLGEPLGT--GGPAIGRAVTTGWREQLHAALIGLGYATREADEAVAAVAPQAEAAG 183
Query: 186 GTPDI 200
GTP +
Sbjct: 184 GTPQV 188
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 32.7 bits (71), Expect = 2.9
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 87 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 236
YT + KRL G G +R + E R F E+ T D+RVD +WS
Sbjct: 31 YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81
>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L31e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 102
Score = 32.7 bits (71), Expect = 2.9
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 75 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLWSKGVRN 251
+TR V KR++ RA RA++ IRK+ + + I +D +N+++WS+
Sbjct: 7 ITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVWSRSREK 66
Query: 252 VP 257
P
Sbjct: 67 PP 68
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 31.9 bits (69), Expect = 5.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 296 DEDSAHKXFTLVTYVPVASIKGLQTENV 379
DE+ A K T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_A3H875 Cluster: Ribosomal protein L31e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L31e -
Caldivirga maquilingensis IC-167
Length = 86
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 66 NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD--IRVDTRLNKFLWSK 239
NE++ T+NL + + + RAP A + I++ + + + ++++ LN LWS+
Sbjct: 4 NEIIL---TINL-RDVKEASRRIRAPYAARFIKRIIARYVKVDEDKVKLNENLNNLLWSR 59
Query: 240 GVRNVPS 260
G++ PS
Sbjct: 60 GIQKPPS 66
>UniRef50_A2ELE1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1419
Score = 31.1 bits (67), Expect = 8.9
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +3
Query: 42 ERKGKSAIN---EVVTREYTVNLHKRLHGVGFKK----RAPRAIKEIRKFAEKQMGTPDI 200
E K KSA N + + ++ V + + G+ + + P+ EIRK + + D+
Sbjct: 842 EHKKKSAENLKISINSPQFIVLAFENMRDFGYGRYDTFKRPKENAEIRKICQNILSKMDV 901
Query: 201 RVDTRLNKFLWSKGVR 248
++DT +KFL S +R
Sbjct: 902 QIDTSHSKFLLSISLR 917
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,425,478
Number of Sequences: 1657284
Number of extensions: 6035659
Number of successful extensions: 12557
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 12403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12554
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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