Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30626.Seq
(587 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 143 2e-33
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 141 1e-32
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 120 3e-26
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 113 4e-24
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 102 5e-21
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 97 2e-19
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 96 5e-19
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 95 1e-18
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 89 5e-17
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 64 3e-09
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 61 2e-08
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 58 2e-07
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 56 5e-07
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 54 2e-06
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 38 0.13
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 36 0.53
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 36 0.53
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 35 1.6
UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein DKFZp4... 34 2.1
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 34 2.1
UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole geno... 33 3.7
UniRef50_Q9CUU3 Cluster: Synaptonemal complex protein 2; n=5; Mu... 33 6.5
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 33 6.5
UniRef50_Q8IDE2 Cluster: Putative uncharacterized protein PF13_0... 32 8.6
UniRef50_A7RHP9 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 32 8.6
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 143 bits (347), Expect = 2e-33
Identities = 65/74 (87%), Positives = 72/74 (97%)
Frame = +2
Query: 248 QGCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 427
+G GHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKF
Sbjct: 73 KGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKF 132
Query: 428 GGPGARARYQKSYR 469
GGPGARARYQKSYR
Sbjct: 133 GGPGARARYQKSYR 146
Score = 116 bits (278), Expect = 5e-25
Identities = 51/69 (73%), Positives = 64/69 (92%)
Frame = +3
Query: 48 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 227
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 228 VXIRVTVKG 254
V IRV VKG
Sbjct: 66 VDIRVRVKG 74
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 141 bits (341), Expect = 1e-32
Identities = 64/74 (86%), Positives = 71/74 (95%)
Frame = +2
Query: 248 QGCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 427
+G G+VAQ+YAIRQAISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKF
Sbjct: 75 KGGGNVAQIYAIRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKF 134
Query: 428 GGPGARARYQKSYR 469
GGPGARARYQKSYR
Sbjct: 135 GGPGARARYQKSYR 148
Score = 111 bits (267), Expect = 1e-23
Identities = 52/73 (71%), Positives = 63/73 (86%)
Frame = +3
Query: 36 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 215
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 216 KFSMVXIRVTVKG 254
+F+ V IR+ VKG
Sbjct: 64 RFAGVDIRIRVKG 76
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 120 bits (288), Expect = 3e-26
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +2
Query: 251 GCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 430
G GH +QVYAIRQAI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFG
Sbjct: 83 GGGHTSQVYAIRQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFG 142
Query: 431 GPGARARYQKSYR 469
G GARARYQKSYR
Sbjct: 143 GRGARARYQKSYR 155
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 113 bits (271), Expect = 4e-24
Identities = 51/73 (69%), Positives = 61/73 (83%)
Frame = +2
Query: 251 GCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 430
G GHV+QVYAIRQAI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFG
Sbjct: 71 GGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFG 130
Query: 431 GPGARARYQKSYR 469
G GAR+R+QKSYR
Sbjct: 131 GKGARSRFQKSYR 143
Score = 85.8 bits (203), Expect = 7e-16
Identities = 37/68 (54%), Positives = 54/68 (79%)
Frame = +3
Query: 51 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 230
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 231 XIRVTVKG 254
IRV V G
Sbjct: 64 DIRVRVTG 71
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 102 bits (245), Expect = 5e-21
Identities = 47/73 (64%), Positives = 58/73 (79%)
Frame = +2
Query: 251 GCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 430
G G +Q+YAIRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFG
Sbjct: 127 GGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFG 186
Query: 431 GPGARARYQKSYR 469
G GARAR QKSYR
Sbjct: 187 GHGARARRQKSYR 199
Score = 79.4 bits (187), Expect = 6e-14
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +3
Query: 57 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 224
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 97.5 bits (232), Expect = 2e-19
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +2
Query: 257 GHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGP 436
G V++VYA+R A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGP
Sbjct: 75 GDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGP 134
Query: 437 GARARYQKSYR 469
GARARYQKSYR
Sbjct: 135 GARARYQKSYR 145
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 96.3 bits (229), Expect = 5e-19
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = +2
Query: 251 GCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 430
G G V+Q YA RQAI+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 431 GPGARARYQKSYR 469
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 227
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 228 VXIRVTVKG 254
+ I V V G
Sbjct: 69 LRIDVAVHG 77
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 95.1 bits (226), Expect = 1e-18
Identities = 45/73 (61%), Positives = 58/73 (79%)
Frame = +2
Query: 251 GCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 430
G GHV+Q+YA+RQAIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFG
Sbjct: 89 GGGHVSQIYAVRQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFG 145
Query: 431 GPGARARYQKSYR 469
G GARAR QKSYR
Sbjct: 146 GRGARARRQKSYR 158
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +3
Query: 33 EARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK 212
E R V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 213 EKFSMVXIRVTVKG 254
F + + + V G
Sbjct: 76 SLFKGLDMNIKVAG 89
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 89.4 bits (212), Expect = 5e-17
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 245 SQGCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 424
S+G G V+Q+YAIRQ+ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 425 FGGPGARARYQKSYR 469
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +3
Query: 60 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIR 239
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 240 VTVKG 254
+ KG
Sbjct: 63 IFSKG 67
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 63.7 bits (148), Expect = 3e-09
Identities = 25/68 (36%), Positives = 48/68 (70%)
Frame = +3
Query: 51 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 230
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 231 XIRVTVKG 254
I V V+G
Sbjct: 61 DIDVKVQG 68
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +2
Query: 248 QGCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK- 424
QG G + Q A R AI++AL+ + +K+ ++YDR++LV DPRR EP K
Sbjct: 67 QGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHKP 119
Query: 425 -FGGPGARARYQKSYR 469
G RA+ QKSYR
Sbjct: 120 NRSTKGPRAKRQKSYR 135
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +3
Query: 51 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 230
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 231 XIRVTVKG 254
I V VKG
Sbjct: 78 DIHVRVKG 85
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +2
Query: 248 QGCGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 373
+G GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 84 KGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
Frame = +2
Query: 248 QGCGHVAQVYAIRQAISKALIAFYQ---------KYVDEASKKEIKDILVQYDRSLLVAD 400
+G G + Q A+R AI++ L+ F++ + +D+ S+ +++ +++DR++LV D
Sbjct: 70 EGGGVMGQADAVRMAIARGLVEFFRCEESDDELCRMMDKISR-DLRTAFLEHDRTMLVGD 128
Query: 401 PRRCEPKKFGGPGARARYQKSYR 469
PRR EP+K+ AR R+QKSYR
Sbjct: 129 PRRTEPEKYMRYSARRRWQKSYR 151
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 72 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 251
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+V IRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 252 G 254
G
Sbjct: 71 G 71
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 56.4 bits (130), Expect = 5e-07
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Frame = +2
Query: 248 QGCGHVAQVYAIRQAISKALIAFYQKY-------VDEASKKEIKDILVQYDRSLLVADPR 406
+G G + Q A IS+ALI + + + + ++++++ + +D+ L+ D R
Sbjct: 69 KGGGFMGQAGASATGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDAR 128
Query: 407 RCEPKKFGGPGARARYQKSYR 469
R EPKKFGGPGAR R QKSYR
Sbjct: 129 RKEPKKFGGPGARRRKQKSYR 149
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 48 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 224
P+Q+ QVFG KK A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 225 MVXIRVTVKGV 257
V I V V GV
Sbjct: 83 RVGIWVRVNGV 93
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 42 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 134
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 38.3 bits (85), Expect = 0.13
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 60 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVXI 236
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + I
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFDFYI 67
Query: 237 RVTVKGV 257
+V+ G+
Sbjct: 68 KVSGGGI 74
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 36.3 bits (80), Expect = 0.53
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 72 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVXIRV 242
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E + ++V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQEGNFDIEVKV 69
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 36.3 bits (80), Expect = 0.53
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVXIRVTV 248
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + I TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 249 KG 254
KG
Sbjct: 66 KG 67
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 34.7 bits (76), Expect = 1.6
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 248
GR+KT+ A G G + VNG P L+ L L++P++ G EK I VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 249 KG 254
KG
Sbjct: 69 KG 70
>UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein
DKFZp469B0933; n=7; Theria|Rep: Putative uncharacterized
protein DKFZp469B0933 - Pongo pygmaeus (Orangutan)
Length = 300
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 260 HVAQVYAIRQAISKALIAFYQKYVD--EASKKEIKDILVQYDRSLLVADPRRCEPKKF 427
H++QV++ ++ + LIAFY+ + E + +E + LV D+ L V E KKF
Sbjct: 73 HISQVWSFQKKQTDLLIAFYKHRITKLETAMQETQQALVSQDKELSVLRKENGELKKF 130
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 34.3 bits (75), Expect = 2.1
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 36 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILL 203
ARR P+ + VF R ++ V K G G+ + G LD +P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 651
Score = 33.5 bits (73), Expect = 3.7
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 145 HWTWLSPDC--CSTNFRNLSFCSARKNSLWLXSE*QSRVWSCSTSLRYQT 288
H T L DC C N LS C R +LW S S++ S LR+QT
Sbjct: 182 HLTSLQKDCFACMPNLMRLSMCETRVANLWTTSAVLSKIPSL-VELRFQT 230
>UniRef50_Q9CUU3 Cluster: Synaptonemal complex protein 2; n=5; Mus
musculus|Rep: Synaptonemal complex protein 2 - Mus
musculus (Mouse)
Length = 1500
Score = 32.7 bits (71), Expect = 6.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 269 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 433
Q+Y I SK L+ K + + SKKE K++L +D SL + + + K FGG
Sbjct: 339 QMYNIEVRESKKLLTLTLKNIVKISKKEGKELLFYFDESLEITNVTK---KVFGG 390
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 32.7 bits (71), Expect = 6.5
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 42 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 218
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLGDVN 62
Query: 219 FSMVXIRVTVKGV 257
+ IRV+ GV
Sbjct: 63 SFDLIIRVSGGGV 75
>UniRef50_Q8IDE2 Cluster: Putative uncharacterized protein PF13_0298;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0298 - Plasmodium falciparum
(isolate 3D7)
Length = 1398
Score = 32.3 bits (70), Expect = 8.6
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 275 YAIRQAISKALIAFYQKYVDEASK-KEIKDILVQYDRSLLVADPRRCEPKKFGGPGARAR 451
Y I++ I FY+KY+D+ K K++K+I+ +Y + L ++ + E K+
Sbjct: 1023 YKIKKKIYTTNSIFYKKYIDKEKKIKKLKNIIEKYKKELQLS-RTQVEKLKYNNHNTSIL 1081
Query: 452 YQKSYR 469
Y+ Y+
Sbjct: 1082 YKVFYK 1087
>UniRef50_A7RHP9 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 539
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 253 VWSCSTSLRYQTSYFK-GSDRLLPEICR 333
+WSCSTS+R +TS FK GS LL + R
Sbjct: 108 LWSCSTSMRNRTSIFKAGSVPLLARLIR 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,168,002
Number of Sequences: 1657284
Number of extensions: 12996347
Number of successful extensions: 35087
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 33978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35079
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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