Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30626.Seq
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    27   0.12 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    25   0.63 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.9  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.8  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   5.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 215 KILYG*XQSDSQGCGHVAQVYAIRQAISKALIAF 316
           KI Y   Q+DS G G  A++Y I++  S+ +IAF
Sbjct: 599 KIFY--VQTDSSGYGLGAELYQIQEDGSRGVIAF 630


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 194 RFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIR 99
           R++K VL +SG++   +    T+H+ T+ A R
Sbjct: 268 RWIKMVLAESGVDTSIYTAHSTRHAATSAAAR 299


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 547 YCTPPNDIAMTTR 509
           YC+ PN  A+TTR
Sbjct: 482 YCSLPNSCALTTR 494


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 547 YCTPPNDIAMTTR 509
           YC+ PN  A+TTR
Sbjct: 489 YCSLPNSCALTTR 501


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 154 WLSPDCCSTNFRNLSFCSARKNSLWLXSE*QSRVWS 261
           W+ P C S  F N  +    +N  W     Q  +W+
Sbjct: 160 WI-PLCNSVTFSNFGYKQCVENRKWQNKVIQKFLWT 194


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 154 WLSPDCCSTNFRNLSFCSARKNSLWLXSE*QSRVWS 261
           W+ P C S  F N  +    +N  W     Q  +W+
Sbjct: 393 WI-PLCNSVTFSNFGYKQCVENRKWQNKVIQKFLWT 427


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 154 WLSPDCCSTNFRNLSFCSARKNSLWLXSE*QSRVWS 261
           W+ P C S  F N  +    +N  W     Q  +W+
Sbjct: 393 WI-PLCNSVTFSNFGYKQCVENRKWQNKVIQKFLWT 427


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 293 ISKALIAFYQKYVDEASKKEIKDI 364
           I K +IAFY K +   +  EIK I
Sbjct: 126 IVKPIIAFYYKPIKTLNGHEIKFI 149


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 74  SEYLDGLDGLTSCLLH 27
           S Y+DG+  +T C +H
Sbjct: 143 SPYMDGVPFVTQCPIH 158


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -1

Query: 269 VLHDHTLDCHSDXNHREFFLAEQKDRFL 186
           VLH H  D H +       L    DRFL
Sbjct: 85  VLHIHIFDLHRNAEIYPDLLKFDPDRFL 112


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 100 RIASVVMECCV*TGAHWT 153
           R+  V M+C      HWT
Sbjct: 179 RLLGVAMDCLKGNAKHWT 196


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 46  SPSRPSKYSDVRKPPP 93
           SP  P +  DV+ PPP
Sbjct: 723 SPLTPHEAFDVKLPPP 738


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 46  SPSRPSKYSDVRKPPP 93
           SP  P +  DV+ PPP
Sbjct: 615 SPLTPHEAFDVKLPPP 630


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,068
Number of Sequences: 336
Number of extensions: 2950
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)