Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30625.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B46F9 Cluster: PREDICTED: similar to importin b... 125 1e-27
UniRef50_Q14974 Cluster: Importin subunit beta-1; n=35; Eumetazo... 111 2e-23
UniRef50_UPI0000660925 Cluster: Importin beta-1 subunit (Karyoph... 110 3e-23
UniRef50_Q4SUR3 Cluster: Chromosome undetermined SCAF13844, whol... 110 4e-23
UniRef50_Q9BIB8 Cluster: Importin beta family protein 1; n=2; Ca... 85 1e-15
UniRef50_UPI000155549C Cluster: PREDICTED: similar to nuclear fa... 66 6e-10
UniRef50_Q8WPL8 Cluster: Similar to importin beta; n=1; Oikopleu... 64 4e-09
UniRef50_O13864 Cluster: Importin subunit beta-1; n=2; Dikarya|R... 52 2e-05
UniRef50_Q9FJD4 Cluster: Importin beta; n=15; Magnoliophyta|Rep:... 50 7e-05
UniRef50_Q6C9D2 Cluster: Yarrowia lipolytica chromosome D of str... 50 7e-05
UniRef50_Q06142 Cluster: Importin subunit beta-1; n=11; Saccharo... 44 0.004
UniRef50_Q5KIZ9 Cluster: Putative uncharacterized protein; n=1; ... 43 0.008
UniRef50_A2QB67 Cluster: Contig An01c0450, complete genome; n=17... 43 0.008
UniRef50_A4RTG8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 42 0.019
UniRef50_Q4Q3F9 Cluster: Importin beta-1 subunit, putative; n=5;... 42 0.019
UniRef50_Q8SR21 Cluster: IMPORTIN BETA 1 SUBUNIT; n=1; Encephali... 40 0.059
UniRef50_P52297 Cluster: Importin subunit beta; n=1; Xenopus lae... 40 0.059
UniRef50_Q1JTG0 Cluster: Importin beta-1 subunit, putative; n=1;... 38 0.31
UniRef50_A0CY26 Cluster: Chromosome undetermined scaffold_30, wh... 36 0.96
UniRef50_Q5CYB0 Cluster: Importin/karyopherin; n=3; Cryptosporid... 36 1.3
UniRef50_A5JZM7 Cluster: Importin-beta 2, putative; n=5; Plasmod... 35 2.2
UniRef50_A4A5V5 Cluster: TRNA (Uracil-5-)-methyltransferase/TrmA... 33 8.9
UniRef50_Q22CG7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_Q6FPN1 Cluster: Similar to sp|P40318 Saccharomyces cere... 33 8.9
>UniRef50_UPI00015B46F9 Cluster: PREDICTED: similar to importin
beta-1; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to importin beta-1 - Nasonia vitripennis
Length = 1170
Score = 125 bits (301), Expect = 1e-27
Identities = 67/116 (57%), Positives = 76/116 (65%)
Frame = +3
Query: 258 SQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSA 437
S VARMAAGLQLKN LTSKD LK QYQQRWLA D R YIK+NIL A+GTEN+RPSSA
Sbjct: 338 STVARMAAGLQLKNQLTSKDLALKSQYQQRWLAFPHDTREYIKKNILGALGTENNRPSSA 397
Query: 438 AQCVAYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAEV 605
AQCVAYV + P + + +EATLE IG CQ+ID+EV
Sbjct: 398 AQCVAYVAVAELPVGQWNELIPLLVNNVANPNSTEMMREATLETIGYICQEIDSEV 453
Score = 63.3 bits (147), Expect = 6e-09
Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Frame = +1
Query: 151 DRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGTVKWLGWQLVCXXXXXXXXXXXXXX 330
++NELEAA +L+ AA TN F++ LS VL+ +
Sbjct: 302 NKNELEAAQNFLEQAAQTNLHEFVQRLSGVLVTAAA-STVARMAAGLQLKNQLTSKDLAL 360
Query: 331 XXXXXDGWLW--QKMFDFI*KKIY*LL*EQRIVVQVQQHSVWRMWAVAELPVGQWE*SNT 504
WL ++I K I L + V + AVAELPVGQW
Sbjct: 361 KSQYQQRWLAFPHDTREYIKKNILGALGTENNRPSSAAQCVAYV-AVAELPVGQWNELIP 419
Query: 505 NFVENVVHVQSTELKRKRLWRLLGYIVRILMLK-FNRKKYPIPTGIIHGMRATEPSNHVR 681
V NV + STE+ R+ +GYI + + + + I T IIHGM+ + S+HVR
Sbjct: 420 LLVNNVANPNSTEMMREATLETIGYICQEIDSEVLVAQSNQILTAIIHGMKGSNTSSHVR 479
Query: 682 LSCYS 696
L+ S
Sbjct: 480 LAATS 484
>UniRef50_Q14974 Cluster: Importin subunit beta-1; n=35;
Eumetazoa|Rep: Importin subunit beta-1 - Homo sapiens
(Human)
Length = 876
Score = 111 bits (267), Expect = 2e-23
Identities = 59/116 (50%), Positives = 73/116 (62%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
NSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSS
Sbjct: 49 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSS 108
Query: 435 AAQCVAYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAE 602
A+QCVA + + P + Q + KE+TLEAIG CQDID E
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPE 164
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGG 255
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS VL G
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPG 48
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 460 AVAELPVGQWE*SNTNFVENVVHVQSTELKRKRLWRLLGYIVR-ILMLKFNRKKYPIPTG 636
A AE+PV QW V NV + STE ++ +GYI + I + K I T
Sbjct: 117 ACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTA 176
Query: 637 IIHGMRATEPSNHVRLS 687
II GMR EPSN+V+L+
Sbjct: 177 IIQGMRKEEPSNNVKLA 193
>UniRef50_UPI0000660925 Cluster: Importin beta-1 subunit
(Karyopherin beta-1 subunit) (Nuclear factor P97)
(Importin 90).; n=1; Takifugu rubripes|Rep: Importin
beta-1 subunit (Karyopherin beta-1 subunit) (Nuclear
factor P97) (Importin 90). - Takifugu rubripes
Length = 937
Score = 110 bits (265), Expect = 3e-23
Identities = 60/123 (48%), Positives = 75/123 (60%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
N+QVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R IK +L +GTE RPSS
Sbjct: 49 NTQVARVAAGLQVKNSLTSKDPDIKTQYQQRWLAIDANARREIKNYVLQTLGTETYRPSS 108
Query: 435 AAQCVAYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAEV*QK 614
A+QCVA + + P + Q KE+TLEAIG CQDID E Q+
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQLMANVTDPSSTEHMKESTLEAIGYICQDIDPEQLQE 168
Query: 615 EVS 623
+
Sbjct: 169 SAN 171
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGTVK 264
+ LI ILEKTVSPDRNELEAA ++L+ AA N F+ LS VL G +
Sbjct: 1 MELITILEKTVSPDRNELEAAQKFLEQAAIENLPMFLVELSKVLANPGNTQ 51
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 460 AVAELPVGQWE*SNTNFVENVVHVQSTELKRKRLWRLLGYIVR-ILMLKFNRKKYPIPTG 636
A AE+PV QW + NV STE ++ +GYI + I + I T
Sbjct: 117 ACAEIPVNQWPELIPQLMANVTDPSSTEHMKESTLEAIGYICQDIDPEQLQESANQILTA 176
Query: 637 IIHGMRATEPSNHVRLS 687
II GMR EPSN+V+L+
Sbjct: 177 IIQGMRKEEPSNNVKLA 193
>UniRef50_Q4SUR3 Cluster: Chromosome undetermined SCAF13844, whole
genome shotgun sequence; n=3; Bilateria|Rep: Chromosome
undetermined SCAF13844, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 985
Score = 110 bits (264), Expect = 4e-23
Identities = 60/123 (48%), Positives = 75/123 (60%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
N+QVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R IK +L +GTE RPSS
Sbjct: 49 NTQVARVAAGLQVKNSLTSKDPDVKTQYQQRWLAIDANARREIKNYVLQTLGTETYRPSS 108
Query: 435 AAQCVAYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAEV*QK 614
A+QCVA + + P + Q KE+TLEAIG CQDID E Q+
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQLMANVTDPSSTEHMKESTLEAIGYICQDIDPEQLQE 168
Query: 615 EVS 623
+
Sbjct: 169 SAN 171
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGTVK 264
+ LI ILEKTVSPDRNELEAA ++L+ AA N TF+ LS VL G +
Sbjct: 1 MELITILEKTVSPDRNELEAAQKFLEQAAIENLPTFLVELSKVLANPGNTQ 51
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 460 AVAELPVGQWE*SNTNFVENVVHVQSTELKRKRLWRLLGYIVR-ILMLKFNRKKYPIPTG 636
A AE+PV QW + NV STE ++ +GYI + I + I T
Sbjct: 117 ACAEIPVNQWPELIPQLMANVTDPSSTEHMKESTLEAIGYICQDIDPEQLQESANQILTA 176
Query: 637 IIHGMRATEPSNHVRLS 687
II GMR EPSN+V+L+
Sbjct: 177 IIQGMRKEEPSNNVKLA 193
>UniRef50_Q9BIB8 Cluster: Importin beta family protein 1; n=2;
Caenorhabditis|Rep: Importin beta family protein 1 -
Caenorhabditis elegans
Length = 896
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/112 (41%), Positives = 60/112 (53%)
Frame = +3
Query: 270 RMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCV 449
R AAGLQLKN L +K+ K Y QRWL L +VR +K+N+ +GTE SRPS AAQCV
Sbjct: 60 RQAAGLQLKNVLCAKETETKNVYLQRWLQLTAEVREQVKQNVTGTLGTEPSRPSIAAQCV 119
Query: 450 AYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAEV 605
A + + P + KE++LE +G CQDID V
Sbjct: 120 AAIACAELPQNLWPNVINLLKSNVTESQSGEMLKESSLETLGYICQDIDPRV 171
Score = 44.4 bits (100), Expect = 0.003
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 3/193 (1%)
Frame = +1
Query: 118 LIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGTVKWLGWQLVCXXX 297
++ +LEKTVS ++N+ + A+ Y+ A +F F++ LS ++L+ + Q
Sbjct: 9 MLTVLEKTVSQNQNDQKQAMDYIAAACQQDFPVFVQCLS-MILRTQQCQSFVRQAAGLQL 67
Query: 298 XXXXXXXXXXXXXXXXDGWLW--QKMFDFI*KKIY*LL*EQRIVVQVQQHSVWRMWAVAE 471
WL ++ + + + + L + + V + A AE
Sbjct: 68 KNVLCAKETETKNVYLQRWLQLTAEVREQVKQNVTGTLGTEPSRPSIAAQCVAAI-ACAE 126
Query: 472 LPVGQWE*SNTNFVENVVHVQSTELKRKRLWRLLGYIVRILMLK-FNRKKYPIPTGIIHG 648
LP W NV QS E+ ++ LGYI + + + K + T IIHG
Sbjct: 127 LPQNLWPNVINLLKSNVTESQSGEMLKESSLETLGYICQDIDPRVLETKANDVLTAIIHG 186
Query: 649 MRATEPSNHVRLS 687
MR E S +VR +
Sbjct: 187 MRPEESSANVRFA 199
>UniRef50_UPI000155549C Cluster: PREDICTED: similar to nuclear
factor p97; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to nuclear factor p97 -
Ornithorhynchus anatinus
Length = 700
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIK 386
NSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K
Sbjct: 273 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVK 316
>UniRef50_Q8WPL8 Cluster: Similar to importin beta; n=1; Oikopleura
dioica|Rep: Similar to importin beta - Oikopleura dioica
(Tunicate)
Length = 883
Score = 63.7 bits (148), Expect = 4e-09
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
N ++ R A LQLKNHL S + K +YQQRWL + + +R +K NSRPSS
Sbjct: 48 NDELCRFQAALQLKNHLVSNNSQTKLEYQQRWLMIDKGLRDQVK---------TNSRPSS 98
Query: 435 AAQCVAYVGSS*APSRTMGMI*YQFCRKCC---SCPIY*TQKEATLEAIGLHCQDIDAEV 605
Q +A + + P+ G + + + KEA++EAIG C D+ E+
Sbjct: 99 IPQVIAAIAGAELPNGHWGEVIQALATNATDEKAAARFERTKEASIEAIGYICSDVKPEL 158
>UniRef50_O13864 Cluster: Importin subunit beta-1; n=2; Dikarya|Rep:
Importin subunit beta-1 - Schizosaccharomyces pombe
(Fission yeast)
Length = 863
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 RMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIG-TENSRPSSAAQC 446
RMAAGL LKN +T+++ K +YQQ W +L +++ +K L +G +E+ SAAQ
Sbjct: 54 RMAAGLALKNAITAREEARKLEYQQLWQSLPVEIKQQVKSLALQTLGSSEHQAGQSAAQL 113
Query: 447 VAYVGS 464
VA + +
Sbjct: 114 VAAIAA 119
>UniRef50_Q9FJD4 Cluster: Importin beta; n=15; Magnoliophyta|Rep:
Importin beta - Arabidopsis thaliana (Mouse-ear cress)
Length = 870
Score = 49.6 bits (113), Expect = 7e-05
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +3
Query: 267 ARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE-NSRPSSAAQ 443
+R AGL LKN L +K+ K + QRWLAL + I+ +L + S+A+Q
Sbjct: 55 SRKLAGLVLKNALDAKEQHRKYELVQRWLALDMSTKSQIRAFLLKTLSAPVPDVRSTASQ 114
Query: 444 CVAYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAEV*QKEVS 623
+A V P + + P + K+ATLE +G C+++ +V ++E
Sbjct: 115 VIAKVAGIELPQKQWPELIVSLLSNIHQLPAH--VKQATLETLGYLCEEVSPDVVEQEHV 172
Query: 624 N 626
N
Sbjct: 173 N 173
>UniRef50_Q6C9D2 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome D
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 865
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 270 RMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAI-GTENSRPSSAAQC 446
R+ AG+ +KN+LTSKD +KQ+ +WLA V IK +L + T N S+AAQ
Sbjct: 57 RVLAGIAIKNNLTSKDQEVKQEQANKWLAADGSVTDQIKSILLEVLKSTNNQVASAAAQA 116
Query: 447 VAYV 458
VA +
Sbjct: 117 VAAI 120
>UniRef50_Q06142 Cluster: Importin subunit beta-1; n=11;
Saccharomycetales|Rep: Importin subunit beta-1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 861
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 270 RMAAGLQLKNHLTSKDPTLKQQYQQRWLA-LAEDVRLYIKENILAA-IGTENSRPSSAAQ 443
R+ A L LKN L SKD QQ+ QRW+ ++ + + IK N L A + E ++AAQ
Sbjct: 58 RILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQ 117
Query: 444 CVAYV 458
+A +
Sbjct: 118 LIAAI 122
>UniRef50_Q5KIZ9 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 865
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 RMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS-AAQC 446
R AAGL KN + ++D + +RWLAL E +K L+ +G+ R + AAQC
Sbjct: 54 RYAAGLAFKNGIAARDAINQPVLSERWLALPESATNPLKHLSLSTLGSPQLRAGAVAAQC 113
Query: 447 VAYVGS 464
V+ + +
Sbjct: 114 VSAIAA 119
Score = 36.3 bits (80), Expect = 0.72
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 460 AVAELPVGQWE*SNTNFVENVVHVQSTELKRKRLWRLLGYIVRILMLK-FNRKKYPIPTG 636
A ELPVG+W +E V + +T L+ L + +GYI ++ K I T
Sbjct: 118 AAIELPVGKWPELIPQLLEFVQNQDNTGLRVNTL-QAVGYICEVIRPDILAAKSNEILTA 176
Query: 637 IIHGMRATEPSNHVR 681
++ G R EPS+ V+
Sbjct: 177 VVQGARKEEPSHEVQ 191
>UniRef50_A2QB67 Cluster: Contig An01c0450, complete genome; n=17;
Pezizomycotina|Rep: Contig An01c0450, complete genome -
Aspergillus niger
Length = 880
Score = 42.7 bits (96), Expect = 0.008
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 270 RMAAGLQLKNHLTSKDPTLKQQYQQRWL-ALAEDVRLYIKENILAAIGTENSRP-SSAAQ 443
R AAG+ LKN T +D Q+ Q +WL + +++ +KE L + +++ R SAAQ
Sbjct: 54 RTAAGIALKNAFTYRDLAKLQEVQTKWLQQITPEIKAQVKELGLKTLNSKDGRAGQSAAQ 113
Query: 444 CVAYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAEV*QKEVS 623
+ + + P + + S K+A+L IG C+ DAE+ + +
Sbjct: 114 FIVSIAAIELPRNEWPELMNILVQNVASGSD--QLKQASLVTIGFICESQDAELRESLAA 171
Query: 624 NS 629
+S
Sbjct: 172 HS 173
>UniRef50_A4RTG8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 873
Score = 41.5 bits (93), Expect = 0.019
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +3
Query: 270 RMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGT-ENSRPSSAAQC 446
R AG+ LKN L +KD +++ ++RW+ R IK + E S AAQ
Sbjct: 55 RQLAGVILKNTLDAKDEAKRRELRERWMTRDAATREEIKRAAWGCLACGEAPVRSVAAQV 114
Query: 447 VAYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAE 602
VA + + P + + R K+A+LEA+G C+++DA+
Sbjct: 115 VAKIAGAEVPRKAWPDLIPSLQRGAQGGGDA-GAKQASLEALGYVCEEVDAD 165
>UniRef50_Q4Q3F9 Cluster: Importin beta-1 subunit, putative; n=5;
Trypanosomatidae|Rep: Importin beta-1 subunit, putative
- Leishmania major
Length = 870
Score = 41.5 bits (93), Expect = 0.019
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 267 ARMAAGLQLKNHLTS--KDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS-A 437
AR AG LKN + ++ + ++RW AL DVRL++K +L+ +G+ N + A
Sbjct: 54 ARNMAGTLLKNAVAPSFREVAARHALEERWRALPADVRLHVKNEVLSTLGSPNRDVRTVA 113
Query: 438 AQCVAYVGSS*APSRTMGMI*YQFCRKCCSCPIY*TQKEATLEAIGLHCQD 590
A V + S PS + S +EA L AIG C++
Sbjct: 114 ANIVGSLARSELPSGEWPQLMGILVGAAQSASE--QHQEAALTAIGYICEE 162
>UniRef50_Q8SR21 Cluster: IMPORTIN BETA 1 SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: IMPORTIN BETA 1 SUBUNIT -
Encephalitozoon cuniculi
Length = 854
Score = 39.9 bits (89), Expect = 0.059
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAI 407
N Q+ RM +G+ LKN L + DP L++ RWL + + R Y+K I A+
Sbjct: 79 NDQL-RMVSGIILKNSLHANDPELQKGCSSRWLGMRHESREYVKGMIKRAL 128
>UniRef50_P52297 Cluster: Importin subunit beta; n=1; Xenopus
laevis|Rep: Importin subunit beta - Xenopus laevis
(African clawed frog)
Length = 260
Score = 39.9 bits (89), Expect = 0.059
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +1
Query: 118 LIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 243
L+ ILEKTVSPDR L ++L+ AA N TF+ LS VL
Sbjct: 2 LVTILEKTVSPDRRXL----KFLEQAAVENLPTFVVELSKVL 39
>UniRef50_Q1JTG0 Cluster: Importin beta-1 subunit, putative; n=1;
Toxoplasma gondii RH|Rep: Importin beta-1 subunit,
putative - Toxoplasma gondii RH
Length = 915
Score = 37.5 bits (83), Expect = 0.31
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 264 VARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSA-A 440
+A+ A + KN +++KD L +W A+AE + ++ +LAAI TE+ + ++A
Sbjct: 75 LAKQIAAVTFKNCISAKDVVLDSAAADKWRAVAEAAKQAMRLQLLAAIKTEHIQVANAVC 134
Query: 441 QCVAYVG 461
Q ++ +G
Sbjct: 135 QVLSKIG 141
>UniRef50_A0CY26 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 853
Score = 35.9 bits (79), Expect = 0.96
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 243 SPRWNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILA-AIGTEN 419
SP+ +SQ R+AAG L+ +T Y+Q WLA+ DV+ IK+ +L+ I ++
Sbjct: 48 SPQLDSQT-RVAAGTLLQRCIT---------YEQGWLAIGLDVKRKIKDELLSQLISSDQ 97
Query: 420 SRPSSAAQCVA 452
+ SAA C++
Sbjct: 98 NIKKSAASCLS 108
>UniRef50_Q5CYB0 Cluster: Importin/karyopherin; n=3;
Cryptosporidium|Rep: Importin/karyopherin -
Cryptosporidium parvum Iowa II
Length = 882
Score = 35.5 bits (78), Expect = 1.3
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Frame = +3
Query: 261 QVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAI-GTENSRPSSA 437
+++R AGL LKN ++ +P + + + W++L ++V IK +L +I S ++
Sbjct: 51 ELSRQLAGLLLKNAVSGIEPRIDIERRGMWISLPQNVTSKIKALVLESILSPVASVRGAS 110
Query: 438 AQCVAYVGSS*AP-SRTMGMI*Y--QFCRKCCSCPIY*TQKEATLEAIGLHCQDIDAEV* 608
Q +A +G P R ++ Y + + + K ++L A+G C+ D+++
Sbjct: 111 CQVIAKLGRVELPCKRWPELLPYLIRLVQNNSDNKMSIIYKRSSLTALGYLCE--DSKIL 168
Query: 609 QKEVSN 626
+ EVS+
Sbjct: 169 ENEVSS 174
>UniRef50_A5JZM7 Cluster: Importin-beta 2, putative; n=5;
Plasmodium|Rep: Importin-beta 2, putative - Plasmodium
vivax
Length = 878
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
N R AGL +KN SKD ++ + W+ ED++ +K ++L + + +
Sbjct: 52 NDPYLRQIAGLLIKNAFASKDNYENEEKARTWVNFPEDIKNELKNSMLHLLSQQGEKVVI 111
Query: 435 AAQC 446
C
Sbjct: 112 GTAC 115
>UniRef50_A4A5V5 Cluster: TRNA (Uracil-5-)-methyltransferase/TrmA;
n=1; Congregibacter litoralis KT71|Rep: TRNA
(Uracil-5-)-methyltransferase/TrmA - Congregibacter
litoralis KT71
Length = 393
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 PSPRWNSQVARMAAGLQLKNHLTSKDPTLKQQ--YQQRWLALAEDVRLYIKENILAA 404
P+P W AR L + +H+T+ + T+ Q+ ++Q A + +R ++K +L A
Sbjct: 190 PNPAWKPDRARRWTTLDIDDHITASEVTVNQRRPFRQGNSAQNQSMRAWLKARVLEA 246
>UniRef50_Q22CG7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 665
Score = 32.7 bits (71), Expect = 8.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 35 FSKNRIESVFCNINLRIVKQCTQKQH*RLYKYLRRQFHLIEMNWKQQLDTSTMLPPQISQ 214
F+ +I+ F + I+ + + +LY L+ Q + M +QQ S P QISQ
Sbjct: 494 FTHQQIQEQFYQLQQSIIPEQQRYNQQQLYNNLQLQQQVFNMQQQQQPAISMQFPLQISQ 553
Query: 215 HS 220
H+
Sbjct: 554 HN 555
>UniRef50_Q6FPN1 Cluster: Similar to sp|P40318 Saccharomyces
cerevisiae YIL030c SSM4; n=1; Candida glabrata|Rep:
Similar to sp|P40318 Saccharomyces cerevisiae YIL030c
SSM4 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1235
Score = 32.7 bits (71), Expect = 8.9
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = -1
Query: 188 SRYLTAASNSFRSGETVFSSICISVNVVSACIVSLFLSLCCKRLTQSCFLKNRNRRTTE 12
SR+++ +S SG+ +F+S + + I S+ L L KR T S F+KN+NRRT+E
Sbjct: 1059 SRFISFLPSS--SGD-LFTSTNDKIRTIFTIINSVLLLLKGKR-TGSVFIKNKNRRTSE 1113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,431,979
Number of Sequences: 1657284
Number of extensions: 13624914
Number of successful extensions: 38694
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 37333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38667
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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