Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30625.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.7  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 146 HLIEMNWKQQLDTSTMLPPQISQHSSKCCPMSFSKVEQS 262
           H  ++N  QQ     M   ++S   ++C P+S S   Q+
Sbjct: 307 HSNDLNMHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQA 345


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 146 ETVFSSICISVNVVSACIVSL 84
           E VFSS+    +V+  CI +L
Sbjct: 92  EEVFSSLLSCCSVIFGCIFAL 112


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 146 ETVFSSICISVNVVSACIVSL 84
           E VFSS+    +V+  CI +L
Sbjct: 92  EEVFSSLLSCCSVIFGCIFAL 112


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 129 YLYKR*CCFCVH 94
           YLY+  C FC++
Sbjct: 497 YLYRMTCLFCIN 508


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,376
Number of Sequences: 336
Number of extensions: 3860
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)