Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30619.Seq
(797 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 4e-37
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 148 4e-36
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 140 1e-33
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 136 1e-32
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 130 1e-30
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 109 3e-24
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 103 2e-22
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 91 1e-18
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 90 2e-18
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 81 1e-15
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 4e-13
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 7e-10
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 61 9e-10
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 57 2e-08
SB_214| Best HMM Match : Arf (HMM E-Value=0) 56 3e-08
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 55 8e-08
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 41 0.001
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 37 0.016
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 37 0.022
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 36 0.038
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 36 0.038
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 31 0.82
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 31 1.4
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 30 2.5
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 30 2.5
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 29 3.3
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 29 4.4
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 4.4
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 28 7.6
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 152 bits (368), Expect = 4e-37
Identities = 70/138 (50%), Positives = 92/138 (66%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 434
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +IYVVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDS 94
Query: 435 ADRDRIGISKDELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLDALRDRTFQ 614
DR+R+ SK+EL ML+ KQD+ L+V+E+ + LGL ++RDR +
Sbjct: 95 NDRERVNESKEELNKMLQEDELKDAVVLVMANKQDLPNALSVSEITEKLGLQSIRDRQWY 154
Query: 615 IFKTSAVRGEGLDQAMDW 668
I A +G GL + +DW
Sbjct: 155 IQAACATQGTGLYEGLDW 172
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 172 SYFRGLLGAREMRILILGLDGAGKTTILINCK 267
S F L G ++MRIL++GLD AGKTTIL K
Sbjct: 7 SLFTRLFGKKQMRILMVGLDAAGKTTILYKLK 38
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 148 bits (359), Expect = 4e-36
Identities = 68/138 (49%), Positives = 90/138 (65%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 434
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 435 ADRDRIGISKDELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLDALRDRTFQ 614
DR+R+G +++EL ML KQD+ + AE+ LGL +LR+R +
Sbjct: 95 NDRERVGEAREELNRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRNRQWY 154
Query: 615 IFKTSAVRGEGLDQAMDW 668
I T A G+GL + +DW
Sbjct: 155 IQATCATSGDGLYEGLDW 172
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +1
Query: 157 MGGLFS-YFRGLLGAREMRILILGLDGAGKTTILINCK 267
MGG+F+ F GL G +EMRIL++GLD AGKTTIL K
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLK 38
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 140 bits (339), Expect = 1e-33
Identities = 65/103 (63%), Positives = 76/103 (73%)
Frame = +3
Query: 360 GQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRXXXXXXXXXXXXXXKQD 539
GQTSIRPYWRCYY NTDA+IYVVDS D+DRIGISK EL+ ML KQD
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANKQD 214
Query: 540 MAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDW 668
M G ++ +EV ALGL AL+ RT+ IFKTSAV+GEGLD+AM+W
Sbjct: 215 MEGAMSSSEVSNALGLSALKSRTWAIFKTSAVKGEGLDEAMEW 257
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 136 bits (330), Expect = 1e-32
Identities = 63/138 (45%), Positives = 88/138 (63%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 434
Y+L++ EVV+T+PT+GFNVE VTYKN+ F VWD+GGQ IR WR YY II+VVDS
Sbjct: 14 YRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDS 73
Query: 435 ADRDRIGISKDELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLDALRDRTFQ 614
ADR+R +++EL +L KQDMA +T +E+ + L L+ +R R +
Sbjct: 74 ADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIREKLKLNEIRGRPWF 133
Query: 615 IFKTSAVRGEGLDQAMDW 668
+ AV+GEGL + +DW
Sbjct: 134 VQSACAVKGEGLFEGLDW 151
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 130 bits (314), Expect = 1e-30
Identities = 61/142 (42%), Positives = 87/142 (61%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 434
Y L++ E V TIPTIGFNVE V YKN+KF VWD+GGQ IR WR Y+ T +I+VVDS
Sbjct: 108 YHLKLDEPVNTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDS 167
Query: 435 ADRDRIGISKDELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLDALRDRTFQ 614
DRDRI +K+EL +L+ KQD+ ++ E+ + L L LR R +
Sbjct: 168 NDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDLPDSMSTTELSEKLSLHTLRSRNWY 227
Query: 615 IFKTSAVRGEGLDQAMDWALER 680
I T A++G+G+ + ++W ++
Sbjct: 228 IQATCALKGQGVYEGLEWLAQQ 249
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 NKMGG-LFSYFRGLLGAREMRILILGLDGAGKTTILINCK 267
+KMG + S FR LLG E+R+L++GLD AGKTTIL + K
Sbjct: 72 SKMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLK 111
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 109 bits (261), Expect = 3e-24
Identities = 59/158 (37%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Frame = +3
Query: 195 CKGNADFDTWIGRCRKDDNSYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTS 371
C A + GR RK YKL++ E V T+PT+ FNVE ++ KN+ F VWD+GGQ
Sbjct: 107 CVVPAKYSLRSGRGRKTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDK 166
Query: 372 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRXXXXXXXXXXXXXXKQDMAGC 551
IR WR Y+ + II+VVDSAD++RI ++EL +L+ KQD+ G
Sbjct: 167 IRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDLLGA 226
Query: 552 LTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMD 665
+ ++ + L L ++I T A G+GL +AM+
Sbjct: 227 IGPDKMAEELSLYKHTKNPWRIQGTCATAGDGLYEAME 264
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 103 bits (246), Expect = 2e-22
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
YKL++ E V+TIPTIGFNVE + KN+ +WD+GGQ IRP WR Y+ T+ +++VVD
Sbjct: 37 YKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVD 96
Query: 432 SADRDRIGISKDELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLDALRDRTF 611
S+D R+ +K+EL +L KQD+ L E+ + LGL + +
Sbjct: 97 SSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDLPNALKAGEMAKHLGLLQHKRNPW 156
Query: 612 QIFKTSAVRGEGLDQAMD 665
+ + A G+GL +AMD
Sbjct: 157 HVQEACATNGDGLYEAMD 174
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +1
Query: 145 LINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTILINCK 267
L++K+ LFS F G R++RI++LGLD AGKTTIL K
Sbjct: 4 LLSKVITLFSEF----GNRQVRIVMLGLDAAGKTTILYKLK 40
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Frame = +3
Query: 255 YKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
Y+ + E V T+PT FNVE + +K ++F+VWD+GG+ RP W+ Y TDA+IYVVD
Sbjct: 39 YRNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVD 98
Query: 432 SADRDRIGISKDELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLDALRDR-T 608
S ++ ++DEL ++L KQD + E+ L L L R
Sbjct: 99 STSAGKLEEARDELFNLLNSAQLNGAPILIFANKQDCPNAIPPREITHMLSLHDLNARHL 158
Query: 609 FQIFKTSAVRGEGL 650
+ + SA+ GEGL
Sbjct: 159 WFVQPCSALLGEGL 172
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +3
Query: 231 RCRKDDNSYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTD 410
R R + K + +V+ P GFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT
Sbjct: 478 RSRYKGSRQKTHIQAMVS--PVQGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 535
Query: 411 AIIYVVDSADRDRIGISKDELVHML 485
+I+VVDS DR+R G +K+EL ML
Sbjct: 536 GLIFVVDSNDRERAGEAKEELSRML 560
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/114 (33%), Positives = 62/114 (54%)
Frame = +3
Query: 288 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 467
IPT+GFN+ +V+ N+ +VWD+GGQ R W Y + I+Y+VD+AD D++ SK+
Sbjct: 50 IPTVGFNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKN 109
Query: 468 ELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTS 629
EL ++L K+D+ L E+ + L L +++DR + S
Sbjct: 110 ELHNLLEKPQLAGIPILVLGNKKDLPNSLDEKELVERLNLTSVQDREICCYSIS 163
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 72.5 bits (170), Expect = 4e-13
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Frame = +3
Query: 273 EVVTTIPTIGFNVEQVTYKN-LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDR 449
+V+ PT GFN++ V K + VWD+GGQ IRPYW+ Y+ NTD +
Sbjct: 41 DVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRKIRPYWKNYFENTDIL----------- 89
Query: 450 IGISKDELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTS 629
EL +L KQD+ T AE+ LGL+ +R R +QI S
Sbjct: 90 ------ELDELLEEEKLIGVPLLVFANKQDLMNAATPAEISSNLGLNTIRSRGWQIQGCS 143
Query: 630 AVRGEGLDQAMDWA 671
A+ GEG+ + +++
Sbjct: 144 ALTGEGVQHSDEYS 157
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 163 GLFSYFRGLLGA--REMRILILGLDGAGKTTIL 255
GL S R L REMRIL+LGLD +GKTTIL
Sbjct: 2 GLLSLLRKLKSEKDREMRILLLGLDNSGKTTIL 34
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/103 (33%), Positives = 52/103 (50%)
Frame = +3
Query: 282 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 461
+T T GFNV +T L +W++GG R YW + +T ++YVVDS+D DR S
Sbjct: 196 STTKTEGFNVVCLTTDGLNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNES 255
Query: 462 KDELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGLD 590
+D L +L KQD+ G ++E+ LG++
Sbjct: 256 RDNLKSLLSNSLLNGVPVLLVASKQDLPGARQLSEIVSVLGIN 298
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 202 EMRILILGLDGAGKTTIL 255
E RIL+LGLDG+GK+ L
Sbjct: 166 EKRILVLGLDGSGKSVFL 183
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 61.7 bits (143), Expect = 7e-10
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +3
Query: 336 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHML 485
K +WD+GGQ S+R YWR Y+ +TD +I+VVDSAD+ R+ K EL +L
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLL 52
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 61.3 bits (142), Expect = 9e-10
Identities = 34/114 (29%), Positives = 59/114 (51%)
Frame = +3
Query: 327 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRXXXXXX 506
KN+ F VWD+GGQ ++R ++ + + +IYVVDS D R +++ +L+ +L+
Sbjct: 16 KNVHFAVWDIGGQPNLRKHY--FTDDKSGLIYVVDSTDIQR--LNEAQLLGILQEKVMVD 71
Query: 507 XXXXXXXXKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDW 668
KQD+ L ++ + LGL L+ + + A G+GL +A W
Sbjct: 72 VPVVVVANKQDLPNVLKAGDIAEHLGLLKLKRNPLHVQEAFASNGDGLCEAHKW 125
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +3
Query: 258 KLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNT 407
K+++ V + GFNVE V +++LKF +WD+GG +RP WR YY NT
Sbjct: 208 KMEMRAVALGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNT 257
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 56.4 bits (130), Expect = 3e-08
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Frame = +3
Query: 288 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 467
+PT+ E+++ ++F +DLGG R W+ Y+ + I++++D AD +R+ SK
Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKK 64
Query: 468 ELVHMLRXXXXXXXXXXXXXXKQDMAGCLTVAEVHQALGL------------DALRDRTF 611
EL +L K D+ G + + Q GL L R
Sbjct: 65 ELDSLLADEQLSSCPVLILGNKIDIPGAVGEDYIRQNFGLFGQTTGKGSVAAKDLATRPM 124
Query: 612 QIFKTSAVRGEGLDQAMDWALE 677
++F S ++ EG + W E
Sbjct: 125 ELFMCSVLKREGYGEGFRWLSE 146
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 54.8 bits (126), Expect = 8e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +3
Query: 351 DLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRXXXXXXXXXXXXXX 530
D+GGQ IRP WR Y+ + +I+VVD ADRDRI ++ EL ++
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 531 KQDM 542
KQD+
Sbjct: 203 KQDL 206
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 282 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVVDSADRDRIGI 458
T + T G T+K+L F+++D+GGQ S R W C+ G T AII+ V + D +
Sbjct: 177 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCVALSAYDLVLA 235
Query: 459 SKDELVHML 485
+E+ M+
Sbjct: 236 EDEEMNRMM 244
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 282 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 461
T + T G Q YK L F+++D+GGQ S R W + + AIIY V + D + +
Sbjct: 178 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYD-LSLE 236
Query: 462 KDE 470
+DE
Sbjct: 237 EDE 239
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 273 EVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW 386
E +TT T+G N+ ++T ++K WDLGGQ +R W
Sbjct: 55 EKITT--TVGLNIGKITISHVKLMFWDLGGQQELRTLW 90
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 142 KLINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTILINCK 267
++ + GL+ Y L E ILILGLD AGKTT+L K
Sbjct: 4 EMFTLLSGLWKY---LFQKDEYFILILGLDNAGKTTLLEQIK 42
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 282 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 461
T + T G Q YK L F+++D+GGQ S R W + + AIIY V + D + +
Sbjct: 226 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYD-LTLE 284
Query: 462 KDE 470
+DE
Sbjct: 285 EDE 287
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 297 IGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
+G V + +K Q WD GQ R + YY N DA+I V D +R
Sbjct: 48 VGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNR 96
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 291 PTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
PTIG F ++ V + +K Q+WD GQ R + YY N D +I D ++
Sbjct: 38 PTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNK 92
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +3
Query: 291 PTIG--FNVEQVTYKN---LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 446
PT+G F+V + K +K Q+WD GQ R YY NT + + D +RD
Sbjct: 44 PTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRD 100
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 270 GEVVTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 443
G +TTI + F + + + +K Q+WD GQ R YY T +I V D
Sbjct: 4 GSYITTIG-VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSA 62
Query: 444 D 446
D
Sbjct: 63 D 63
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 35.9 bits (79), Expect = 0.038
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 288 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 446
I TIG F + + K +K Q+WD GQ R YY II V D D++
Sbjct: 59 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQE 115
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 35.9 bits (79), Expect = 0.038
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 282 TTIPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
T I TIG F + +T K +K Q+WD GQ R YY + I+ + D
Sbjct: 36 TYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYD 89
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 300 GFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 446
G + V K++K Q+WD GQ R R YY + V D + R+
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRE 181
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 333 LKFQVWDLGGQTSIRPYWRC-YYGNTDAIIYVVD 431
+K Q+WD GQ R C YY N +A++++ D
Sbjct: 95 VKLQLWDTAGQERFRKSMVCHYYRNVNAVVFMYD 128
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 333 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISK 464
+KF++WD GQ YY A I V D ++D +K
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK 113
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 297 IGFNVEQVTYKN--LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 446
+ F V+ +T + K +WD GQ R YY +I V D+ R+
Sbjct: 43 VDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRE 94
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 327 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
+++K Q+WD GQ R + YY + + +I D
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYD 127
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 315 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
QV K +K QVWD GQ R YY + V D
Sbjct: 55 QVEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYD 93
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +3
Query: 297 IGFNVEQV--TYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 467
I F V+ V K +K Q+WD GQ R YY I + D + + +D
Sbjct: 56 IDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQD 114
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 402 NTDAIIYVVD-SADRDRIGISKDELVHML---RXXXXXXXXXXXXXXKQDMAGCLTVAEV 569
N DA IYVVD SA+ R+ I EL M+ + QD L+ V
Sbjct: 126 NVDAFIYVVDSSAESQRVNIGDKELQAMMNNSKSQPRQPLLVLSAVATQDTLP-LSCVRV 184
Query: 570 HQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWALER 680
L ++ L +R +Q+ +GL + M W L++
Sbjct: 185 TDMLQMNKL-NRPWQVNMMCVENLDGLLEGMTWLLKQ 220
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 327 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
K +K Q+WD GQ YY I+ V D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYD 37
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 318 VTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
V K KF +WD GQ + YY + A I V D
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYD 41
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +3
Query: 291 PTIGFNVEQVTYK-----NLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 431
PTIG + T + ++ Q+W + GQ R YY DA + + D
Sbjct: 49 PTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFD 100
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 494 RISERITRCFSQQTGHGRMSDSSRGTPGPGLGRL 595
R S R T + Q +GR D +RG P G GR+
Sbjct: 477 RSSSRRTSDYQQHDQNGRGVDENRGEPSYGRGRI 510
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,330,003
Number of Sequences: 59808
Number of extensions: 544556
Number of successful extensions: 1333
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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