Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30618.Seq
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    31   0.054
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.7  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   6.3  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   8.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   8.3  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    23   8.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   8.3  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 30.7 bits (66), Expect = 0.054
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +3

Query: 552 KNHGKEGTIVVTKVEEPSKYGVVVYDDNGQIESFIEKPQEFISNKINAGMYL 707
           K+H K  T + TKV    K     YD++G +E+ + +  E  S+ +NAG  L
Sbjct: 86  KHHQK--TTMSTKVSLLKKLCKAEYDESGDMEAHLFRMDELFSSLMNAGQEL 135


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 639 DHYHHKQPHH 610
           DH+HH+Q HH
Sbjct: 650 DHHHHQQHHH 659



 Score = 23.4 bits (48), Expect = 8.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 636 HYHHKQPHH 610
           H+HH  PHH
Sbjct: 157 HHHHHHPHH 165


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 233 SKVLNEFRSRRPRSGPVSLLISY 165
           S V+  FRSRR R   VSL+I +
Sbjct: 96  SVVITLFRSRRHRRSRVSLMICH 118


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 407 HFLMRLNHWEQQDH 448
           +FL RLNHW   DH
Sbjct: 80  NFLFRLNHW-HDDH 92


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 636 HYHHKQPHH 610
           H+HH  PHH
Sbjct: 186 HHHHHHPHH 194


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 492 EWFRTGAEQFPGKCQW 445
           EWFR   E++PG   W
Sbjct: 166 EWFRYDLERYPGIRGW 181


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +3

Query: 549 HKNHGKEGTIVVTKVEEPS---KYGVVVYDDNGQIESFIEKPQEFISNKINA 695
           HK H K   +  T   E +   KY  VV DD  + +S +E+  + +   INA
Sbjct: 745 HKVHQKASIMAGTVQVESTRSLKYLGVVIDDRLKFKSHLEEACKKVMKAINA 796


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,795
Number of Sequences: 2352
Number of extensions: 15468
Number of successful extensions: 73
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)