Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30616.Seq
(459 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 141 6e-33
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 120 2e-26
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 110 2e-23
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 109 2e-23
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 99 4e-20
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 94 1e-18
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 92 5e-18
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 88 1e-16
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 85 5e-16
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 75 6e-13
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 73 4e-12
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 70 3e-11
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 67 1e-10
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 58 7e-08
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 58 1e-07
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 48 1e-04
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 45 0.001
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 44 0.002
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 43 0.003
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.020
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 39 0.045
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 39 0.045
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 35 0.97
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 33 3.0
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 33 3.0
UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA hel... 33 3.0
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 33 3.9
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 33 3.9
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 32 5.2
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 32 6.8
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 141 bits (342), Expect = 6e-33
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +2
Query: 53 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 233 VDTRLNK 253
VDTRLNK
Sbjct: 61 VDTRLNK 67
Score = 97.9 bits (233), Expect = 9e-20
Identities = 47/60 (78%), Positives = 48/60 (80%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + LWSKGVRNVPF NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE
Sbjct: 65 LNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 120 bits (288), Expect = 2e-26
Identities = 54/68 (79%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 64 IDTRLNKA 71
Score = 68.9 bits (161), Expect = 5e-11
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 110 bits (264), Expect = 2e-23
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +2
Query: 53 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
MAK K E+K KSAINEVVTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1 MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 61 IDTRLNKA 68
Score = 71.7 bits (168), Expect = 7e-12
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + LW +G+RN PF NDDEDS +KL+TLVTYVPV++ K LQTENV+++++
Sbjct: 65 LNKALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 109 bits (263), Expect = 2e-23
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = +2
Query: 53 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 VDTRLNK 253
+DTRLNK
Sbjct: 61 IDTRLNK 67
Score = 71.3 bits (167), Expect = 9e-12
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 65 LNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 99.1 bits (236), Expect = 4e-20
Identities = 41/50 (82%), Positives = 49/50 (98%)
Frame = +2
Query: 107 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKS 256
TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK+
Sbjct: 60 TREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKA 109
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 94.3 bits (224), Expect = 1e-18
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +2
Query: 59 KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 238
K + +K +SA+N+VVTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D+R+D
Sbjct: 55 KSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLD 114
Query: 239 TRLNKSFGLRESEMFP 286
+LN+ + FP
Sbjct: 115 PKLNQEVWKYGVKNFP 130
Score = 38.7 bits (86), Expect = 0.060
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFT-LVTYVPVASIKGLQTENVD 411
L Q +W GV+N P NDDE + KL+T V + + + KGLQT +D
Sbjct: 117 LNQEVWKYGVKNFPRRLRVRLERKRNDDEGAKEKLYTYAVPVLGLGTAKGLQTTVID 173
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 92.3 bits (219), Expect = 5e-18
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +2
Query: 71 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 250
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LN
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 251 K 253
K
Sbjct: 61 K 61
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 148 CWI*KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRNVPFXXXXXXXXXXNDD 327
C K PK+ + K K G L + +WSKG+R P NDD
Sbjct: 27 CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDD 86
Query: 328 EDSAHKLFTLVTY--VPVASIKGLQTENVD 411
ED+ + F+LVT +P + GL T+ ++
Sbjct: 87 EDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 87.8 bits (208), Expect = 1e-16
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = +2
Query: 56 AKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 235
AK G++KG SAINE+VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ +
Sbjct: 4 AKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVI 63
Query: 236 DTRLNKSF 259
T LN F
Sbjct: 64 CT-LNSLF 70
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 85.4 bits (202), Expect = 5e-16
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +2
Query: 71 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 238
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 75.4 bits (177), Expect = 6e-13
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = +2
Query: 104 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLRESEMF 283
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK+ + +
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 284 PSVSV*GFHEDVMMMKI 334
V + GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
Score = 35.1 bits (77), Expect = 0.73
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 256 LWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGL 393
+W+KG NV + N + + HKL+TL+TYVPV + K L
Sbjct: 76 VWNKGTSNVSWVPICGFE---NMMKLNIHKLYTLITYVPVTTFKNL 118
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 72.5 bits (170), Expect = 4e-12
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +WSKGVRNVP+ N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 34 LNKAVWSKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 176 AIKEIRKFAEKQMGTPDIRVDTRLNKS 256
A IRKFA K+MGTPD+R+DTRLNK+
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKA 37
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 69.7 bits (163), Expect = 3e-11
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 118 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
Score = 52.4 bits (120), Expect = 5e-06
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = +2
Query: 158 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKS 256
+K RA+K+IRKFA K++GTPD+R+DTRLNK+
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKA 121
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 67.3 bits (157), Expect = 1e-10
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +2
Query: 119 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 253
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNK
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNK 56
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +1
Query: 160 KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSA 339
K P++ + + KT G L + +WS G+RN+P N++E +
Sbjct: 26 KKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIPRRVRVRLCKRKNEEEGAQ 85
Query: 340 HKLFTLVTYVPVASIKGLQTENVDA 414
+ +TLV ++ V S GL TE A
Sbjct: 86 SQFYTLVQHLQVDSYHGLLTEKTKA 110
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -1
Query: 249 FKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVTT 100
F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVTT
Sbjct: 28 FNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVTT 77
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 58.4 bits (135), Expect = 7e-08
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = +2
Query: 44 KITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP 223
K+ KP E K K +TRE T+++HK LH FKKRAP+AIK IR A K M T
Sbjct: 28 KVGNKKPSKEIKAKEMAP--ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTH 85
Query: 224 DIRVDTRLNK 253
+++ D LN+
Sbjct: 86 NVKFDMGLNQ 95
Score = 46.0 bits (104), Expect = 4e-04
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQ 420
L Q +WS+G+R+V + E+ K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 93 LNQFIWSQGIRSVADRIRVRMARLPMEGEEG--KFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +2
Query: 107 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 253
T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNK
Sbjct: 39 TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNK 87
Score = 49.6 bits (113), Expect = 3e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 402
L + +WSKG+RN P N+DEDS +++TLV +V V S KGL E
Sbjct: 85 LNKFIWSKGIRNPPKRVRVKIERVRNEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 152 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKS 256
GF++ P +KEIRKFA K+MGTPD+ +D NK+
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKA 83
Score = 36.3 bits (80), Expect = 0.32
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 160 KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRN-VPFXXXXXXXXXXNDDEDS 336
+ACP + K K G + + ++G+RN VP +DEDS
Sbjct: 52 EACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRNNVPHRIPVRLSRKCKEDEDS 111
Query: 337 AHKLFTLVTYVPVAS 381
+KL+ LVT VPV +
Sbjct: 112 PNKLYRLVTCVPVTT 126
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +2
Query: 98 EVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 250
+ V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN
Sbjct: 82 DAVSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLN 132
Score = 43.2 bits (97), Expect = 0.003
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 241 SLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLF-TLVTYVPVASIKGLQTENVD 411
SL +W KGV+ VP E + HK F T+++ VPVAS KGL T+ V+
Sbjct: 130 SLNTYIWHKGVKGVPGRVRVLIQRKSETTEGNKHKHFYTVISNVPVASFKGLTTKTVE 187
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +1
Query: 241 SLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 402
SL + +W++G+RN+P +++D K +TL +VPV + GL+TE
Sbjct: 314 SLNEAVWARGIRNLPRRIRVRLQRKKKEEDDGKGKYYTLAQHVPVDTFDGLKTE 367
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 125 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 250
N+HKR+ G F KR AIKEI+KFA K +IR++ LN
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELN 56
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 40.3 bits (90), Expect = 0.020
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 95 NEVVTREYTVNLHKRLHG 148
+EVVTREYT+NLHKRLHG
Sbjct: 13 DEVVTREYTINLHKRLHG 30
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 39.1 bits (87), Expect = 0.045
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 104 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 250
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVN 51
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 39.1 bits (87), Expect = 0.045
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 110 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLRESEMFPS 289
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ R + P+
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPPA 68
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 34.7 bits (76), Expect = 0.97
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 116 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLRESEMFPS 289
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ R E PS
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPPS 68
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 33.1 bits (72), Expect = 3.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 325 DEDSAHKLFTLVTYVPVASIKGLQTENV 408
DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 33.1 bits (72), Expect = 3.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 113 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 253
EYTVNL K + KR +A+K +++F + +++ LNK
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNK 48
>UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA
helicase ruvA; n=6; Actinomycetales|Rep: Holliday
junction ATP-dependent DNA helicase ruvA - Streptomyces
avermitilis
Length = 203
Score = 33.1 bits (72), Expect = 3.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 38 KLKITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKR-APRAIKEIRKFAEKQM 214
+LK + +P G G AI VT + LH L G+G+ R A A+ + AE
Sbjct: 126 ELKDRLGEPLGT--GGPAIGRAVTTGWREQLHAALIGLGYATREADEAVAAVAPQAEAAG 183
Query: 215 GTPDI 229
GTP +
Sbjct: 184 GTPQV 188
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 32.7 bits (71), Expect = 3.9
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 116 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLN 250
YT+NL +RL+ RA RA++ +R+F + G D+++D +N
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVN 55
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 32.7 bits (71), Expect = 3.9
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 253
GK A + V + YT+ L + + V KRA RA+KE+R F + M T +++D +N+
Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 32.3 bits (70), Expect = 5.2
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 110 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLR 268
R YT+ L K L +RA RAI I++FA M +IR+D ++ LR
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLR 58
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 31.9 bits (69), Expect = 6.8
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 116 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLRESEMFPS 289
Y VNL +R++ +RA RA++ +R+F + ++ +D LN R E P+
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPPA 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,915,680
Number of Sequences: 1657284
Number of extensions: 7148297
Number of successful extensions: 14409
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 14140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14405
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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