Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30607.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 140 1e-32
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 134 1e-30
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 120 1e-26
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 119 4e-26
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 118 1e-25
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 117 2e-25
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 6e-16
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 82 6e-15
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 77 2e-13
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 74 2e-12
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 68 1e-10
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 65 1e-09
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 64 2e-09
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 59 6e-08
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 54 2e-06
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 53 4e-06
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 44 0.003
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 42 0.008
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.88
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 1.2
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 34 1.5
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 34 1.5
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 33 2.7
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 33 3.6
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 140 bits (340), Expect = 1e-32
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 286 IVVNLTGRLN 257
IVVNLTGRLN
Sbjct: 61 IVVNLTGRLN 70
Score = 84.2 bits (199), Expect = 1e-15
Identities = 37/48 (77%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 117
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 134 bits (324), Expect = 1e-30
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 286 IVVNLTGRLN 257
IVVNLTGRLN
Sbjct: 184 IVVNLTGRLN 193
Score = 72.5 bits (170), Expect = 5e-12
Identities = 32/48 (66%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 117
+CGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARR
Sbjct: 194 KCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARR 241
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 120 bits (290), Expect = 1e-26
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = -1
Query: 445 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 266
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 265 RLN 257
RLN
Sbjct: 234 RLN 236
Score = 71.3 bits (167), Expect = 1e-11
Identities = 32/48 (66%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 117
+CGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+
Sbjct: 237 KCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQ 284
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 119 bits (286), Expect = 4e-26
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 286 IVVNLTGRLN 257
IVV L GRLN
Sbjct: 61 IVVELNGRLN 70
Score = 81.4 bits (192), Expect = 1e-14
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARR 117
+CGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 71 KCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 118 bits (283), Expect = 1e-25
Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 4/83 (4%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 286 IVVNLTGRLN--NVVS--FHLVL 230
+VV LT RLN V+S FH+ L
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQL 82
Score = 72.5 bits (170), Expect = 5e-12
Identities = 32/48 (66%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 117
+CGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARR
Sbjct: 70 KCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARR 117
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 117 bits (281), Expect = 2e-25
Identities = 56/72 (77%), Positives = 62/72 (86%)
Frame = -1
Query: 472 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 293
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 292 GKIVVNLTGRLN 257
GK+VVNLTGRLN
Sbjct: 157 GKMVVNLTGRLN 168
Score = 74.1 bits (174), Expect = 2e-12
Identities = 32/48 (66%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 117
+CGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+
Sbjct: 169 KCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 6e-16
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1
Query: 472 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 335
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 48.8 bits (111), Expect(2) = 6e-16
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1
Query: 334 GYIGEFEIVDDHRAGKIVVNLTGRLN 257
GYI EFE +DDHRAGKIVV L GR+N
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRIN 132
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 82.2 bits (194), Expect = 6e-15
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 286 IVVNLTGRLN 257
I+V L GR+N
Sbjct: 61 IIVQLLGRIN 70
Score = 37.9 bits (84), Expect = 0.13
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARR 117
+CG ISPR+ + N + R + LPS++ G ++++T G+M H + R
Sbjct: 71 KCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIR 121
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/70 (52%), Positives = 50/70 (71%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 286 IVVNLTGRLN 257
V L GR+N
Sbjct: 61 YRVQLLGRIN 70
Score = 49.6 bits (113), Expect = 4e-05
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 123
+ G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEA 116
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 73.7 bits (173), Expect = 2e-12
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = -1
Query: 451 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 272
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 271 TGRLNN 254
GR+N+
Sbjct: 65 QGRVND 70
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -3
Query: 266 QTKQCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 123
+ C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA
Sbjct: 67 RVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEA 115
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 68.1 bits (159), Expect = 1e-10
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 286 IVVNLTGRLN 257
V L GR+N
Sbjct: 61 YSVTLVGRIN 70
Score = 52.4 bits (120), Expect = 5e-06
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 120
+CG I PR+ V ERW LP++ FG L+LTTS G+M EAR
Sbjct: 71 KCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEAR 117
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/68 (44%), Positives = 47/68 (69%)
Frame = -1
Query: 457 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 278
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 277 NLTGRLNN 254
L+G +N+
Sbjct: 63 ELSGNIND 70
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -3
Query: 254 CGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARR 117
CG I PRF + + E + LP+R FG L+++T+ G+M ++AR+
Sbjct: 71 CGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARK 117
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/64 (43%), Positives = 45/64 (70%)
Frame = -1
Query: 448 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 269
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 268 GRLN 257
GRLN
Sbjct: 65 GRLN 68
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEE 126
+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E
Sbjct: 69 RCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKE 113
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 58.8 bits (136), Expect = 6e-08
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = -1
Query: 448 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 269
L+D + +I NA + GK +V+I P S +I + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 268 GRLNN 254
+NN
Sbjct: 66 DTINN 70
Score = 52.4 bits (120), Expect = 5e-06
Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 254 CGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 117
CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+
Sbjct: 71 CGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 286 IVVNLTGRL 260
V+L ++
Sbjct: 61 FSVHLLAKI 69
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 123
+CG ISPRF V + W LPS G LV+TT+ G+M H EA
Sbjct: 71 KCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEA 116
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 52.8 bits (121), Expect = 4e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -1
Query: 472 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 293
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 292 GKIVVNLTGRLN 257
GK V L G +N
Sbjct: 76 GKFEVELKGAIN 87
Score = 51.6 bits (118), Expect = 1e-05
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 120
+CG + PR+ ++ E+W LP+R +G L++TTS G+M H EAR
Sbjct: 88 ECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAR 134
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = -1
Query: 454 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 281
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R GKI+
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKII 60
Score = 38.3 bits (85), Expect = 0.095
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -3
Query: 257 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 120
+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAK 116
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 41.9 bits (94), Expect = 0.008
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -1
Query: 328 IGEFEIVDDHRAGKIVVNLTGRLNNVVS 245
IG+FE++DDHRAGKIV NL+ ++ V S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.88
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -1
Query: 454 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 311
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -1
Query: 448 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 317
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 34.3 bits (75), Expect = 1.5
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = -1
Query: 448 LSDALKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIVDDHRAGKIV 281
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 280 VNLTGRLNNVVSFHLVLMFPSTILKDGLIC 191
+ +N L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 34.3 bits (75), Expect = 1.5
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -1
Query: 358 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLN 257
F+TV MK G+FEIVD+ G+I V+L G LN
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLN 33
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 33.5 bits (73), Expect = 2.7
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -1
Query: 448 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 269
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 268 GRLNNVVSFHLVLM-FPSTILK 206
N VV+ + L+ PS I K
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKK 85
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 463 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 293
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = -1
Query: 466 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 287
MV + ++D L I NA + + L P SK+ + ++ + G+I + E ++D++ G
Sbjct: 1 MVMTDPIADMLTRIRNANMV-RHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGI 59
Query: 286 IVVNLTGRLNN 254
+ + L NN
Sbjct: 60 LRIFLKYGANN 70
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,602,376
Number of Sequences: 1657284
Number of extensions: 6801957
Number of successful extensions: 14144
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 13888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14130
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -