Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30606.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 140 2e-32
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 134 2e-30
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 120 3e-26
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 119 8e-26
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 118 2e-25
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 117 3e-25
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 1e-15
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 82 1e-14
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 77 4e-13
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 73 5e-12
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 68 2e-10
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 67 3e-10
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 64 2e-09
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 63 7e-09
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 61 2e-08
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 54 3e-06
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 50 7e-05
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 48 2e-04
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 48 2e-04
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 47 5e-04
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 47 5e-04
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 42 0.015
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 40 0.078
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 38 0.18
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.55
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 36 1.3
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 1.7
UniRef50_Q6AJ50 Cluster: Probable murein precusor biosynthesis b... 35 2.2
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 2.2
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 34 2.9
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 2.9
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 3.9
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 33 5.1
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 33 6.7
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 8.9
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 33 8.9
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 8.9
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 140 bits (340), Expect = 2e-32
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = -3
Query: 465 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 286
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 285 IVVNLTGRLN 256
IVVNLTGRLN
Sbjct: 61 IVVNLTGRLN 70
Score = 108 bits (260), Expect = 1e-22
Identities = 48/60 (80%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 134 bits (324), Expect = 2e-30
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = -3
Query: 465 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 286
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 285 IVVNLTGRLN 256
IVVNLTGRLN
Sbjct: 184 IVVNLTGRLN 193
Score = 97.1 bits (231), Expect = 4e-19
Identities = 43/60 (71%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+CGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRKH GGKILGFFF
Sbjct: 194 KCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 120 bits (290), Expect = 3e-26
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = -3
Query: 444 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 265
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 264 RLN 256
RLN
Sbjct: 234 RLN 236
Score = 79.4 bits (187), Expect = 8e-14
Identities = 35/54 (64%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 98
+CGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 237 KCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 119 bits (286), Expect = 8e-26
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = -3
Query: 465 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 286
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 285 IVVNLTGRLN 256
IVV L GRLN
Sbjct: 61 IVVELNGRLN 70
Score = 102 bits (244), Expect = 1e-20
Identities = 45/60 (75%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+CGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARRK++GGK+LGFF+
Sbjct: 71 KCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 118 bits (283), Expect = 2e-25
Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 4/83 (4%)
Frame = -3
Query: 465 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 286
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 285 IVVNLTGRLN--SVVS--FHLVL 229
+VV LT RLN V+S FH+ L
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQL 82
Score = 97.1 bits (231), Expect = 4e-19
Identities = 43/60 (71%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+CGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRKH GGKILGFFF
Sbjct: 70 KCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 117 bits (281), Expect = 3e-25
Identities = 56/72 (77%), Positives = 62/72 (86%)
Frame = -3
Query: 471 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 292
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 291 GKIVVNLTGRLN 256
GK+VVNLTGRLN
Sbjct: 157 GKMVVNLTGRLN 168
Score = 94.7 bits (225), Expect = 2e-18
Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 83
+CGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+KH GG+ILGFF
Sbjct: 169 KCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 1e-15
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -3
Query: 471 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 334
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 48.8 bits (111), Expect(2) = 1e-15
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -3
Query: 333 GYIGEFEIVDDHRAGKIVVNLTGRLN 256
GYI EFE +DDHRAGKIVV L GR+N
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRIN 132
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = -3
Query: 465 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 286
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 285 IVVNLTGRLN 256
I+V L GR+N
Sbjct: 61 IIVQLLGRIN 70
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 89
+CG ISPR+ + N + R + LPS++ G ++++T G+M H + R+ +GG LG
Sbjct: 71 KCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLG 130
Query: 88 FFF 80
+ +
Sbjct: 131 YVY 133
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/70 (52%), Positives = 50/70 (71%)
Frame = -3
Query: 465 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 286
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 285 IVVNLTGRLN 256
V L GR+N
Sbjct: 61 YRVQLLGRIN 70
Score = 59.7 bits (138), Expect = 7e-08
Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+ G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K +GG+++ + +
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = -3
Query: 450 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 271
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 270 TGRLN 256
GR+N
Sbjct: 65 QGRVN 69
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = -2
Query: 265 QTKQCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 89
+ C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++++GG++LG
Sbjct: 67 RVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLG 126
Query: 88 FFF 80
FF+
Sbjct: 127 FFY 129
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = -3
Query: 465 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 286
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 285 IVVNLTGRLN 256
V L GR+N
Sbjct: 61 YSVTLVGRIN 70
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+CG I PR+ V ERW LP++ FG L+LTTS G+M EAR K +GG++L + +
Sbjct: 71 KCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E +++GGKILG+F+
Sbjct: 69 RCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/64 (43%), Positives = 45/64 (70%)
Frame = -3
Query: 447 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 268
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 267 GRLN 256
GRLN
Sbjct: 65 GRLN 68
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -3
Query: 456 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 277
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 276 NLTGRLN 256
L+G +N
Sbjct: 63 ELSGNIN 69
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -2
Query: 253 CGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
CG I PRF + + E + LP+R FG L+++T+ G+M ++AR++ LGG +L + +
Sbjct: 71 CGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -2
Query: 253 CGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+ +GGK+L + +
Sbjct: 71 CGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 61.3 bits (142), Expect = 2e-08
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+CG + PR+ ++ E+W LP+R +G L++TTS G+M H EAR + +GG+++ + +
Sbjct: 88 ECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
Score = 52.8 bits (121), Expect = 8e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -3
Query: 471 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 292
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 291 GKIVVNLTGRLN 256
GK V L G +N
Sbjct: 76 GKFEVELKGAIN 87
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+CG ISPRF V + W LPS G LV+TT+ G+M H EA + +GG ++G+ +
Sbjct: 71 KCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = -3
Query: 465 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 286
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 285 IVVNLTGRL 259
V+L ++
Sbjct: 61 FSVHLLAKI 69
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 49.6 bits (113), Expect = 7e-05
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = +2
Query: 518 YPIRPIVSRITIHWAVVLQRRDWENPGRYPT*SPCSTSPFRPAGVIAKRARTDRPSQQLR 697
YP+ +S AVVLQRRDWENPG + PF + ++ ARTDRPSQQLR
Sbjct: 55 YPLVKALSESYYGLAVVLQRRDWENPGVTQLNRLAAHPPF-ASWRNSEEARTDRPSQQLR 113
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = +2
Query: 536 VSRITIHWAVVLQRRDWENPGRYPT*SPCSTSPFRPAGVIAKRARTDRPSQQLR 697
++ IT AVVLQRRDWENPG + PF + ++ ARTDRPSQQLR
Sbjct: 1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPF-ASWRNSEEARTDRPSQQLR 53
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +2
Query: 521 PIRPIVSRITIHWAVVLQRRDWENPGRYPT*SPCSTSPFRPAGVIAKRARTDRPSQQLR 697
P+ ++ AVVLQRRDWENPG + PF + ++ ARTDRPSQQLR
Sbjct: 14 PLESTCRHASLALAVVLQRRDWENPGVTQLNRLAAHPPF-ASWRNSEEARTDRPSQQLR 71
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = +2
Query: 560 AVVLQRRDWENPGRYPT*SPCSTSPFRPAGVIAKRARTDRPSQQLR 697
AVVLQRRDWENPG + PF + ++ ARTDRPSQQLR
Sbjct: 23 AVVLQRRDWENPGVTQLNRLAAHPPF-ASWRNSEEARTDRPSQQLR 67
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 597 GVTQLNRLAAHPPF 638
GVTQLNRLAAHPPF
Sbjct: 35 GVTQLNRLAAHPPF 48
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -2
Query: 256 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+ + +GG ++ + +
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = -3
Query: 453 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 280
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R GKI+
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKII 60
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 41.9 bits (94), Expect = 0.015
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -3
Query: 327 IGEFEIVDDHRAGKIVVNLTGRLNSVVS 244
IG+FE++DDHRAGKIV NL+ ++ V S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 39.5 bits (88), Expect = 0.078
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 632 PFRPAGVIAKRARTDRPSQQLR 697
P PAGVI++ ARTDRPSQQLR
Sbjct: 30 PLSPAGVISEEARTDRPSQQLR 51
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1
Query: 586 GKPWALPNLIALQHIPLSASWRNSEE 663
GK ALPNLIALQHIPLS + SEE
Sbjct: 15 GKTLALPNLIALQHIPLSPAGVISEE 40
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 38.3 bits (85), Expect = 0.18
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 386 MRTCLFPRFSALCIDFKASLN-TFIRTMAKI*LALRSEPN*RGARYPIRPIVSRITIHWA 562
M++ LF ++ + ++ ++ T R+++K +++ S P GAR PI P I A
Sbjct: 1 MKSVLFADWTCMTRNYNLPVHSTPNRSVSKY-ISILSNPG--GARDPISPKGGPNKISGA 57
Query: 563 VVLQRRDWENPGRYPT*SPCSTSPFRPAGVIAKRARTDRPSQ 688
L+RR+ +NPG P +P P P G K+A +R S+
Sbjct: 58 AFLKRREGKNPG-CPQLNPLEALPLFPGGEKTKKAPPNRLSK 98
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 36.7 bits (81), Expect = 0.55
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -2
Query: 235 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
R VP + + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 35.5 bits (78), Expect = 1.3
Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = -3
Query: 447 LSDALKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIVDDHRAGKIV 280
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 279 VNLTGRLNSVVSFHLVLMFPSTILKDGLIC 190
+ +N+ L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -3
Query: 453 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 310
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q6AJ50 Cluster: Probable murein precusor biosynthesis
bifunctional protein; n=1; Desulfotalea psychrophila|Rep:
Probable murein precusor biosynthesis bifunctional
protein - Desulfotalea psychrophila
Length = 1014
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = -3
Query: 540 LTIGRIGYRAPRQFGSLRSAS*ILAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIV 361
L +G A RQ GSL + ++ + + L+ GK QVL+ P + I+
Sbjct: 919 LELGEFAEEAHRQIGSLAGELSLDYLLIVGEFASFLQQAALNSGMGKEQVLVFPSKEAII 978
Query: 360 KFLTVMMKHGYIGEFEIV 307
+L G +GE +IV
Sbjct: 979 DWLQAYQADGGLGEKDIV 996
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -3
Query: 447 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 316
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -3
Query: 357 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLN 256
F+TV MK G+FEIVD+ G+I V+L G LN
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLN 33
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2
Query: 172 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 172 GYLVLTTSGGIMDHEEARRKHLGGKIL 92
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 33.5 bits (73), Expect = 5.1
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -3
Query: 447 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 268
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 267 GRLNSVVSFHLVLM-FPSTILK 205
N VV+ + L+ PS I K
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKK 85
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 6.7
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 390 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 506
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 462 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 292
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 172 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
G ++L+TS G+M +EARR +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 32.7 bits (71), Expect = 8.9
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = -2
Query: 253 CGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 83
C +++P D IN + + +L +GY+V+TT G++DHEE G +LG+F
Sbjct: 140 CNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLLGYF 185
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 32.7 bits (71), Expect = 8.9
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 509 GARYPIRPIVSRIT 550
GARYPIRPIVSRIT
Sbjct: 262 GARYPIRPIVSRIT 275
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 8.9
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 172 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 80
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,096,147
Number of Sequences: 1657284
Number of extensions: 13208320
Number of successful extensions: 28348
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 27611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28323
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -