Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30606.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.99 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   4.0  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   7.0  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    23   9.2  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 355 KLNDDFGTGPDEDLSFPSLFS 417
           +L DDF TGPD + + P++FS
Sbjct: 609 ELRDDFPTGPDPNFN-PNIFS 628


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 468 AMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKV 367
           A+  +N+L+ +      A+KR + Q L+R C K+
Sbjct: 598 ALRTLNLLNRSTDHALLAQKRQEHQRLVRECDKI 631


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -2

Query: 286 DCCKSHRQTKQCGVISPRFDVPINDIER 203
           D C  + + ++CG   P+    +ND+ +
Sbjct: 33  DLCGPNEEFQECGTACPKTCADLNDLPK 60


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 226 VPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 92
           V +ND+ERW + +        VL  SG  +  +E R   + G ++
Sbjct: 304 VSVNDLERWRDRIHEAIDQGFVLDKSGNRIMLDEQRGIDILGDVV 348


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,266
Number of Sequences: 2352
Number of extensions: 13834
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)