Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30604.Seq
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82010-1|AAC51330.1| 443|Homo sapiens heme A: farnesyltransfera... 67 8e-11
U09466-1|AAA21148.1| 443|Homo sapiens heme A:farnesyltransferas... 67 8e-11
BT006985-1|AAP35631.1| 443|Homo sapiens COX10 homolog, cytochro... 67 8e-11
BC006394-1|AAH06394.1| 443|Homo sapiens COX10 homolog, cytochro... 67 8e-11
BC000060-1|AAH00060.1| 443|Homo sapiens COX10 homolog, cytochro... 67 8e-11
L25851-1|AAB59359.2| 1179|Homo sapiens integrin alpha E precurso... 31 4.6
BC117207-1|AAI17208.1| 1179|Homo sapiens integrin, alpha E (anti... 31 4.6
BC113436-1|AAI13437.1| 1179|Homo sapiens integrin, alpha E (anti... 31 4.6
AF168787-6|AAF43107.1| 1127|Homo sapiens HUMINAE protein. 31 4.6
BC044246-1|AAH44246.1| 491|Homo sapiens KIAA1913 protein protein. 30 8.1
AL137251-1|CAI19564.1| 491|Homo sapiens KIAA1913 protein. 30 8.1
AB067500-1|BAB67806.1| 509|Homo sapiens KIAA1913 protein protein. 30 8.1
AB052099-1|BAD05135.1| 491|Homo sapiens HBE61 protein. 30 8.1
>U82010-1|AAC51330.1| 443|Homo sapiens heme A: farnesyltransferase
protein.
Length = 443
Score = 66.9 bits (156), Expect = 8e-11
Identities = 40/91 (43%), Positives = 51/91 (56%)
Frame = +2
Query: 503 ILAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLG 682
+ +VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ F + + G+
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFATC-CAVPGVA 249
Query: 683 RFVFWGQPLDSCTREQETSFLYTSVYTQ*KR 775
PL FLYT YT KR
Sbjct: 250 ILTLGVNPLTGAL-GLFNIFLYTCCYTPLKR 279
Score = 52.0 bits (119), Expect = 2e-06
Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Frame = +3
Query: 246 PASARISTAQNWRSKVPLKTQTTATVK---NKVTQDTRVWKETPS--YDRKSNTGQYCLM 410
P S +S N + + L+ + K T++ + WKE YD Q
Sbjct: 104 PPSLSLSRKPNEKELIELEPDSVIEDSIDVGKETKEEKRWKEMKLQVYDLPGILAQ---- 159
Query: 411 LSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFXXXXXXXXXXXXTL*ISIMKYHLMPKCR 590
LSK +LT+LVV T+ AG+ALAP PF F +
Sbjct: 160 LSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSVGTGLASCAANSINQFFEVPFDSNMN 219
Query: 591 GQRTGCLSKVY*SPSMAIGFAALDQAA*ALGVLYFGVNPLTAALG 725
+ L + SP +A+ FA A + +L GVNPLT ALG
Sbjct: 220 RTKNRPLVRGQISPLLAVSFATC-CAVPGVAILTLGVNPLTGALG 263
>U09466-1|AAA21148.1| 443|Homo sapiens heme A:farnesyltransferase
protein.
Length = 443
Score = 66.9 bits (156), Expect = 8e-11
Identities = 40/91 (43%), Positives = 51/91 (56%)
Frame = +2
Query: 503 ILAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLG 682
+ +VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ F + + G+
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFATC-CAVPGVA 249
Query: 683 RFVFWGQPLDSCTREQETSFLYTSVYTQ*KR 775
PL FLYT YT KR
Sbjct: 250 ILTLGVNPLTGAL-GLFNIFLYTCCYTPLKR 279
Score = 52.0 bits (119), Expect = 2e-06
Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Frame = +3
Query: 246 PASARISTAQNWRSKVPLKTQTTATVK---NKVTQDTRVWKETPS--YDRKSNTGQYCLM 410
P S +S N + + L+ + K T++ + WKE YD Q
Sbjct: 104 PPSLSLSRKPNEKELIELEPDSVIEDSIDVGKETKEEKRWKEMKLQVYDLPGILAQ---- 159
Query: 411 LSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFXXXXXXXXXXXXTL*ISIMKYHLMPKCR 590
LSK +LT+LVV T+ AG+ALAP PF F +
Sbjct: 160 LSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSVGTGLASCAANSINQFFEVPFDSNMN 219
Query: 591 GQRTGCLSKVY*SPSMAIGFAALDQAA*ALGVLYFGVNPLTAALG 725
+ L + SP +A+ FA A + +L GVNPLT ALG
Sbjct: 220 RTKNRPLVRGQISPLLAVSFATC-CAVPGVAILTLGVNPLTGALG 263
>BT006985-1|AAP35631.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 66.9 bits (156), Expect = 8e-11
Identities = 40/91 (43%), Positives = 51/91 (56%)
Frame = +2
Query: 503 ILAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLG 682
+ +VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ F + + G+
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFATC-CAVPGVA 249
Query: 683 RFVFWGQPLDSCTREQETSFLYTSVYTQ*KR 775
PL FLYT YT KR
Sbjct: 250 ILTLGVNPLTGAL-GLFNIFLYTCCYTPLKR 279
Score = 52.0 bits (119), Expect = 2e-06
Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Frame = +3
Query: 246 PASARISTAQNWRSKVPLKTQTTATVK---NKVTQDTRVWKETPS--YDRKSNTGQYCLM 410
P S +S N + + L+ + K T++ + WKE YD Q
Sbjct: 104 PPSLSLSRKPNEKELIELEPDSVIEDSIDVGKETKEEKRWKEMKLQVYDLPGILAQ---- 159
Query: 411 LSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFXXXXXXXXXXXXTL*ISIMKYHLMPKCR 590
LSK +LT+LVV T+ AG+ALAP PF F +
Sbjct: 160 LSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSVGTGLASCAANSINQFFEVPFDSNMN 219
Query: 591 GQRTGCLSKVY*SPSMAIGFAALDQAA*ALGVLYFGVNPLTAALG 725
+ L + SP +A+ FA A + +L GVNPLT ALG
Sbjct: 220 RTKNRPLVRGQISPLLAVSFATC-CAVPGVAILTLGVNPLTGALG 263
>BC006394-1|AAH06394.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 66.9 bits (156), Expect = 8e-11
Identities = 40/91 (43%), Positives = 51/91 (56%)
Frame = +2
Query: 503 ILAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLG 682
+ +VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ F + + G+
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFATC-CAVPGVA 249
Query: 683 RFVFWGQPLDSCTREQETSFLYTSVYTQ*KR 775
PL FLYT YT KR
Sbjct: 250 ILTLGVNPLTGAL-GLFNIFLYTCCYTPLKR 279
Score = 52.0 bits (119), Expect = 2e-06
Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Frame = +3
Query: 246 PASARISTAQNWRSKVPLKTQTTATVK---NKVTQDTRVWKETPS--YDRKSNTGQYCLM 410
P S +S N + + L+ + K T++ + WKE YD Q
Sbjct: 104 PPSLSLSRKPNEKELIELEPDSVIEDSIDVGKETKEEKRWKEMKLQVYDLPGILAQ---- 159
Query: 411 LSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFXXXXXXXXXXXXTL*ISIMKYHLMPKCR 590
LSK +LT+LVV T+ AG+ALAP PF F +
Sbjct: 160 LSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSVGTGLASCAANSINQFFEVPFDSNMN 219
Query: 591 GQRTGCLSKVY*SPSMAIGFAALDQAA*ALGVLYFGVNPLTAALG 725
+ L + SP +A+ FA A + +L GVNPLT ALG
Sbjct: 220 RTKNRPLVRGQISPLLAVSFATC-CAVPGVAILTLGVNPLTGALG 263
>BC000060-1|AAH00060.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 66.9 bits (156), Expect = 8e-11
Identities = 40/91 (43%), Positives = 51/91 (56%)
Frame = +2
Query: 503 ILAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLG 682
+ +VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ F + + G+
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFATC-CAVPGVA 249
Query: 683 RFVFWGQPLDSCTREQETSFLYTSVYTQ*KR 775
PL FLYT YT KR
Sbjct: 250 ILTLGVNPLTGAL-GLFNIFLYTCCYTPLKR 279
Score = 52.0 bits (119), Expect = 2e-06
Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Frame = +3
Query: 246 PASARISTAQNWRSKVPLKTQTTATVK---NKVTQDTRVWKETPS--YDRKSNTGQYCLM 410
P S +S N + + L+ + K T++ + WKE YD Q
Sbjct: 104 PPSLSLSRKPNEKELIELEPDSVIEDSIDVGKETKEEKRWKEMKLQVYDLPGILAQ---- 159
Query: 411 LSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFXXXXXXXXXXXXTL*ISIMKYHLMPKCR 590
LSK +LT+LVV T+ AG+ALAP PF F +
Sbjct: 160 LSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSVGTGLASCAANSINQFFEVPFDSNMN 219
Query: 591 GQRTGCLSKVY*SPSMAIGFAALDQAA*ALGVLYFGVNPLTAALG 725
+ L + SP +A+ FA A + +L GVNPLT ALG
Sbjct: 220 RTKNRPLVRGQISPLLAVSFATC-CAVPGVAILTLGVNPLTGALG 263
>L25851-1|AAB59359.2| 1179|Homo sapiens integrin alpha E precursor
protein.
Length = 1179
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 169 TLCLKHGYVGVYSKPVLFKITNNTLFQHLPEYQQHKTGEVKF 294
TL +HG+V V SKP + + H E+ H GE F
Sbjct: 958 TLQFRHGFVAVLSKPSIMYVNTGQGLSHHKEFLFHVHGENLF 999
>BC117207-1|AAI17208.1| 1179|Homo sapiens integrin, alpha E (antigen
CD103, human mucosal lymphocyte antigen 1; alpha pol
protein.
Length = 1179
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 169 TLCLKHGYVGVYSKPVLFKITNNTLFQHLPEYQQHKTGEVKF 294
TL +HG+V V SKP + + H E+ H GE F
Sbjct: 958 TLQFRHGFVAVLSKPSIMYVNTGQGLSHHKEFLFHVHGENLF 999
>BC113436-1|AAI13437.1| 1179|Homo sapiens integrin, alpha E (antigen
CD103, human mucosal lymphocyte antigen 1; alpha pol
protein.
Length = 1179
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 169 TLCLKHGYVGVYSKPVLFKITNNTLFQHLPEYQQHKTGEVKF 294
TL +HG+V V SKP + + H E+ H GE F
Sbjct: 958 TLQFRHGFVAVLSKPSIMYVNTGQGLSHHKEFLFHVHGENLF 999
>AF168787-6|AAF43107.1| 1127|Homo sapiens HUMINAE protein.
Length = 1127
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 169 TLCLKHGYVGVYSKPVLFKITNNTLFQHLPEYQQHKTGEVKF 294
TL +HG+V V SKP + + H E+ H GE F
Sbjct: 906 TLQFRHGFVAVLSKPSIMYVNTGQGLSHHKEFLFHVHGENLF 947
>BC044246-1|AAH44246.1| 491|Homo sapiens KIAA1913 protein protein.
Length = 491
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 575 DAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLGRFVF-WGQPLDSCTREQETSFLY 748
+ Q+ R + V+V+ + +H ++ +GP ++G+G F+F + R++ET ++
Sbjct: 101 ETQVIRNEGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHENRDKETKIIH 159
>AL137251-1|CAI19564.1| 491|Homo sapiens KIAA1913 protein.
Length = 491
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 575 DAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLGRFVF-WGQPLDSCTREQETSFLY 748
+ Q+ R + V+V+ + +H ++ +GP ++G+G F+F + R++ET ++
Sbjct: 101 ETQVIRNEGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHENRDKETKIIH 159
>AB067500-1|BAB67806.1| 509|Homo sapiens KIAA1913 protein protein.
Length = 509
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 575 DAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLGRFVF-WGQPLDSCTREQETSFLY 748
+ Q+ R + V+V+ + +H ++ +GP ++G+G F+F + R++ET ++
Sbjct: 119 ETQVIRNEGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHENRDKETKIIH 177
>AB052099-1|BAD05135.1| 491|Homo sapiens HBE61 protein.
Length = 491
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 575 DAQMSRTKNRVLVKGLLEPVHGNRFCSIGPSSVGLGRFVF-WGQPLDSCTREQETSFLY 748
+ Q+ R + V+V+ + +H ++ +GP ++G+G F+F + R++ET ++
Sbjct: 101 ETQVIRNEGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHENRDKETKIIH 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,394,557
Number of Sequences: 237096
Number of extensions: 2660129
Number of successful extensions: 8753
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8744
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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