Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30598.Seq
(847 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 135 4e-32
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 1e-13
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 69 4e-12
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 62 5e-10
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 58 7e-09
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 56 4e-08
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 52 8e-07
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 45 7e-05
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 44 2e-04
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 41 0.001
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.018
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 35 0.072
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 33 0.22
SB_732| Best HMM Match : AAA (HMM E-Value=0) 30 2.1
SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23) 28 8.3
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 28 8.3
SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 135 bits (327), Expect = 4e-32
Identities = 59/65 (90%), Positives = 64/65 (98%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMRAVEFKV+ETDPSP+CIVAPDTVIHC+GEP+KREEEEE+LN VGYDDIGGCRKQL
Sbjct: 108 VRGGMRAVEFKVIETDPSPYCIVAPDTVIHCEGEPVKREEEEESLNEVGYDDIGGCRKQL 167
Query: 690 AQIKE 704
AQIKE
Sbjct: 168 AQIKE 172
Score = 101 bits (241), Expect = 1e-21
Identities = 46/59 (77%), Positives = 56/59 (94%)
Frame = +2
Query: 80 DDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETV 256
D+L+TAIL+ K RPNRL+VEEAV+DDNSVV +SQAKME+LQLFRGDTVL+KGK+RK+TV
Sbjct: 5 DELATAILKNKSRPNRLLVEEAVNDDNSVVTMSQAKMEELQLFRGDTVLIKGKKRKDTV 63
Score = 58.0 bits (134), Expect = 9e-09
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +3
Query: 621 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTG 800
RE E N V +DDIGG +++E+V+ P+ HP F G+ P G+L YG G G
Sbjct: 298 RETVVEVPN-VSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCG 356
Query: 801 KTLIA 815
KTL+A
Sbjct: 357 KTLLA 361
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVV 351
L +G+ + CIVLSDD D+KIRM DVV
Sbjct: 53 LIKGKKRKDTVCIVLSDDTISDDKIRMNRVVRMNLRVRLGDVV 95
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 77.4 bits (182), Expect = 1e-14
Identities = 37/75 (49%), Positives = 50/75 (66%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGG 770
VIH G IK++ E A V + IGG + Q+ ++EM+E+PL +P LF A GV P G
Sbjct: 235 VIHPFGSVIKKDSE--AKKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRG 292
Query: 771 ILMYGAAGTGKTLIA 815
IL+YG +GTGKT+IA
Sbjct: 293 ILLYGPSGTGKTMIA 307
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V + D+GG ++KE VE PL+HP F+ +G++P GILMYG G KTLIA
Sbjct: 534 VHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIA 588
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 74.5 bits (175), Expect = 1e-13
Identities = 34/75 (45%), Positives = 48/75 (64%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGG 770
V+ D +P+ + E Y DIGG Q+ +IKE VELPL HP L++ +G+KP G
Sbjct: 357 VLSDDADPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKG 416
Query: 771 ILMYGAAGTGKTLIA 815
+++YG GTGKTL+A
Sbjct: 417 VILYGQPGTGKTLLA 431
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 70.9 bits (166), Expect = 1e-12
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
Y+ +GG KQ+ +IKE++ELP++HP LF+A+G+ G+L+YG GTGKTL+A
Sbjct: 176 YEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLA 228
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 69.3 bits (162), Expect = 4e-12
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V Y DIGGC++Q+ +++E+VE PL HP F +G++P G+L++G GTGKTL A
Sbjct: 81 VTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCA 135
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 62.1 bits (144), Expect = 5e-10
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +3
Query: 633 EEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLI 812
EE N V Y +IGG Q +I+E VELPL H L+K IG+ P G+L+YG G GKT++
Sbjct: 156 EEKPN-VSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTML 214
Query: 813 A 815
A
Sbjct: 215 A 215
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 58.4 bits (135), Expect = 7e-09
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V +D +GG KQ+ +KEM+ PL +P +F + P G+L +G GTGKTL+A
Sbjct: 881 VKFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVA 935
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 56.0 bits (129), Expect = 4e-08
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGA 788
+P+ E + Y D+GG +Q+ +++E++ELPL +P LF+ +G+ P G L++G
Sbjct: 118 DPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGP 177
Query: 789 AG 794
G
Sbjct: 178 PG 179
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
++V + DIGGC L Q+ +++ + + HP +F +GV P G L++G G GKTL+A
Sbjct: 672 SSVKFADIGGCSNTLEQVGKLL-VHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLA 727
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+ + D+GG +I + ++LPL HP LF A G++ G+L+YG GTGKTL+A
Sbjct: 809 ISWKDVGGLDSVKEEILDTIQLPLLHPELF-AAGLR-RSGVLLYGPPGTGKTLMA 861
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 666 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLI 812
+ G + +KE+V+ PL +P F +G+ GIL+ GA G GKTL+
Sbjct: 213 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 261
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 642 LNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLI 812
L +DD+GG +++ +E PL HP F +G++ G+L+YG G KT +
Sbjct: 478 LQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTL 534
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 642 LNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLI 812
L +DD+GG +++ +E PL HP F +G++ G+L+YG G KT +
Sbjct: 7 LQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTL 63
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 666 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLI 812
+ G + +KE+V+ PL +P F +G+ GIL+ GA G GKTL+
Sbjct: 43 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 91
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+G++++GG ++E + P + LF ++ GG+L+YG GTGKTL+A
Sbjct: 664 LGWENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLA 718
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +3
Query: 693 QIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+++E+VE LR+P FK +G K G+L+ G+ GTGKTL+A
Sbjct: 142 ELQEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLA 181
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGA 788
E ++R+ ++ N V + DI + ++E V LPL P F+ I +P G+LM G
Sbjct: 234 EALERDILQKNPN-VHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIR-RPWRGVLMVGP 291
Query: 789 AGTGKTLIA 815
GTGKT++A
Sbjct: 292 PGTGKTMLA 300
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 663 DIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
D+ GC + +I E V L++P + +G K G ++ G GTGKTL+A
Sbjct: 49 DVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLLA 98
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 37.1 bits (82), Expect = 0.018
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 717 PLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
P++HP F A+G+ GIL+ G G GKTL+A
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLA 34
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 37.1 bits (82), Expect = 0.018
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 717 PLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
P++HP F A+G+ GIL+ G G GKTL+A
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLA 34
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+ D+ G ++ ++ E V+ L+ + +G K G L+ G GTGKTL+A
Sbjct: 124 FKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIPKGALLVGPPGTGKTLLA 175
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGT 797
V + DI G +KE V LP++ P LF P GIL+YG T
Sbjct: 94 VKWSDIAGLESAKEALKEAVILPIKFPHLFTGKRT-PWRGILLYGVTFT 141
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 747 IGVKPHGGILMYGAAGTGKTLIA 815
+G+K GIL++G GTGKTL+A
Sbjct: 177 MGLKHVKGILLFGPPGTGKTLMA 199
>SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23)
Length = 172
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 618 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 713
KREEE E L + + C+K+L ++E++E
Sbjct: 63 KREEELELLLETRTEKLSECKKRLLDLEEIIE 94
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 618 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 713
KREEE E L + + C+K+L ++E++E
Sbjct: 664 KREEELELLLETRTEKLSECKKRLLDLEEIIE 695
>SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 603 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEM 707
D + + EEEEE +G+D+ G ++L +I+E+
Sbjct: 255 DDDETEDEEEEEEQPVMGWDEYGTSPQRLQRIREL 289
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,613,606
Number of Sequences: 59808
Number of extensions: 585370
Number of successful extensions: 1633
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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