Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30598.Seq
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 177 1e-44
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 177 1e-44
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 71 1e-12
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 70 2e-12
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 70 2e-12
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 69 6e-12
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 68 1e-11
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 68 1e-11
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 64 1e-10
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 64 1e-10
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 58 1e-08
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 58 1e-08
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 50 2e-06
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 44 1e-04
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 44 1e-04
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 41 0.001
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 41 0.001
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 38 0.009
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 38 0.009
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 34 0.15
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 34 0.15
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 34 0.15
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 5.5
Z83221-5|CAB05706.2| 578|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 9.6
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 9.6
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 177 bits (430), Expect = 1e-44
Identities = 83/102 (81%), Positives = 90/102 (88%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG RKQL
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQL 218
Query: 690 AQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
AQIKEMVELPLRHP LFKAIGVKP GIL++G GTGKTLIA
Sbjct: 219 AQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIA 260
Score = 105 bits (253), Expect = 3e-23
Identities = 47/95 (49%), Positives = 67/95 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIF 157
Score = 89.0 bits (211), Expect = 4e-18
Identities = 40/63 (63%), Positives = 56/63 (88%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 251 TVA 259
TV+
Sbjct: 73 TVS 75
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +3
Query: 621 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTG 800
RE E N + DIGG + +++E+V+ P+ HP + G++P G+L YG G G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 801 KTLIA 815
KTL+A
Sbjct: 529 KTLLA 533
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 177 bits (430), Expect = 1e-44
Identities = 83/102 (81%), Positives = 90/102 (88%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG RKQL
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQL 218
Query: 690 AQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
AQIKEMVELPLRHP LFKAIGVKP GIL++G GTGKTLIA
Sbjct: 219 AQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIA 260
Score = 105 bits (253), Expect = 3e-23
Identities = 47/95 (49%), Positives = 67/95 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIF 157
Score = 89.0 bits (211), Expect = 4e-18
Identities = 40/63 (63%), Positives = 56/63 (88%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 251 TVA 259
TV+
Sbjct: 73 TVS 75
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +3
Query: 621 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTG 800
RE E N + DIGG + +++E+V+ P+ HP + G++P G+L YG G G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 801 KTLIA 815
KTL+A
Sbjct: 529 KTLLA 533
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 169 bits (412), Expect = 2e-42
Identities = 76/102 (74%), Positives = 90/102 (88%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
V+ MR VEFKVVET+P+P CIV+PDT+IH +G+PIKREEEEE++N +GYDD+GG RKQL
Sbjct: 160 VQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQL 219
Query: 690 AQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
AQIKEMVELPLRHP LFKAIG+KP GIL++G GTGKTLIA
Sbjct: 220 AQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIA 261
Score = 118 bits (284), Expect = 5e-27
Identities = 48/95 (50%), Positives = 70/95 (73%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + + I++SD++CP+EK+RM DVVSI P P++ YG R+H+L
Sbjct: 64 ILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVL 123
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+LKPYF+EAYRP+H+ D F
Sbjct: 124 PIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIF 158
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/63 (66%), Positives = 55/63 (87%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 251 TVA 259
+VA
Sbjct: 73 SVA 75
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +3
Query: 621 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTG 800
RE E N + DIGG + +++E+V+ P+ HP + G++P G+L YG G G
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529
Query: 801 KTLIA 815
KTL+A
Sbjct: 530 KTLLA 534
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/75 (41%), Positives = 48/75 (64%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGG 770
V+ D +P+ + E Y D+GG +Q+ +IKE VELPL HP ++ +G++P G
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKG 224
Query: 771 ILMYGAAGTGKTLIA 815
+++YG GTGKTL+A
Sbjct: 225 VILYGCPGTGKTLLA 239
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 70.1 bits (164), Expect = 2e-12
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+DDIGGC Q+ ++KE VELPL HP ++ +G+ G+++YG GTGKTL+A
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLA 234
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGA 788
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ P G L++G
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 184
Query: 789 AGTGKTLIA 815
GTGKTL+A
Sbjct: 185 PGTGKTLLA 193
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGA 788
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ P G L++G
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 192
Query: 789 AGTGKTLIA 815
GTGKTL+A
Sbjct: 193 PGTGKTLLA 201
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 68.9 bits (161), Expect = 4e-12
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V Y D+GGC+ Q+ +++E+VE PL HP + +G++P G+L+YG GTGKTL A
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCA 228
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 68.5 bits (160), Expect = 6e-12
Identities = 27/53 (50%), Positives = 41/53 (77%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ G+L++G GTGKTL+A
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 67.7 bits (158), Expect = 1e-11
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ G+L+YG GTGKTL+A
Sbjct: 153 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 205
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 67.7 bits (158), Expect = 1e-11
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ G+L+YG GTGKTL+A
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 226
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+ Y DIGG Q +++E VELPL H L++ IG+ P G+LMYG G GKT++A
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLA 212
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
Y DIGGC KQ+ ++ E V LP+ H F +G+ P G+LMYG GTGKT++A
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMA 228
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
++VG+D +GG + +KE+V P+ +P +F+ + P G++ YG GTGKTL+A
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVA 442
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
++VG+D +GG + +KE+V P+ +P +F+ + P G++ YG GTGKTL+A
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVA 440
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
++VG+D +GG + +KE+V P+ +P +F+ + P G++ YG GTGKTL+A
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVA 442
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
++VG+D +GG + +KE+V P+ +P +F+ + P G++ YG GTGKTL+A
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVA 442
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
++VG+D +GG + +KE+V P+ +P +F+ + P G++ YG GTGKTL+A
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVA 440
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
++VG+D +GG + +KE+V P+ +P +F+ + P G++ YG GTGKTL+A
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVA 442
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
++VG+D +GG + +KE+V P+ +P +F+ + P G++ YG GTGKTL+A
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVA 442
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V ++DIGG + +I++ V P +HP F+ G+ P GIL+YG G KTLIA
Sbjct: 456 VSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIA 510
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 579 APDTVIHCDGEPIKREEEE--EALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIG 752
A T+ H D I E E N +G+ D+ G ++E+V LP + P +F I
Sbjct: 287 AEPTLKHFDENIISLIESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVFTGIR 346
Query: 753 VKPHGGILMYGAAGTGKTLIAPC 821
P G +L++G GTGKT+I C
Sbjct: 347 APPKG-VLLFGPPGTGKTMIGRC 368
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+D+IGGC + +A++K+ + LPLR S + + P GIL+YG G GKTL+A
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLA 131
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+D+IGGC + +A++K+ + LPLR S + + P GIL+YG G GKTL+A
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLA 134
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 633 EEALNAVGY--DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKT 806
+E L+ G DD+ GC A ++E V LP +P+LFK + +P GIL++G G GKT
Sbjct: 167 DEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLR-QPVKGILLFGPPGNGKT 225
Query: 807 LIA 815
L+A
Sbjct: 226 LLA 228
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/52 (38%), Positives = 37/52 (71%)
Frame = +3
Query: 660 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+D+GG +Q +++++ P ++P LF+++GV GIL++G +G GKTL+A
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLA 53
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/52 (38%), Positives = 37/52 (71%)
Frame = +3
Query: 660 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+D+GG +Q +++++ P ++P LF+++GV GIL++G +G GKTL+A
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLA 779
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/52 (38%), Positives = 37/52 (71%)
Frame = +3
Query: 660 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+D+GG +Q +++++ P ++P LF+++GV GIL++G +G GKTL+A
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLA 779
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V + DI G +KE V LP++ P LF KP GIL++G GTGK+ IA
Sbjct: 115 VKWTDIAGLEGAKEALKEAVILPIKFPQLFTG-NRKPWQGILLFGPPGTGKSYIA 168
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V + D+ GC + +I E V L++P +K +G K G ++ G GTGKTL+A
Sbjct: 290 VKFADVAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLA 343
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V ++ IGG +Q ++ + + L+ P F +GV P G +++G G GKT+ A
Sbjct: 203 VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFA 256
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGV--KPHGGILMY 782
+P + E + V +DDIG + Q++ + P++ F A+G+ +P GIL+
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQ-GILLC 574
Query: 783 GAAGTGKTLIA 815
G G GKTL+A
Sbjct: 575 GPPGCGKTLLA 585
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V ++ IGG +Q ++ + + L+ P F +GV P G +++G G GKT+ A
Sbjct: 203 VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFA 256
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGV--KPHGGILMY 782
+P + E + V +DDIG + Q++ + P++ F A+G+ +P GIL+
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQ-GILLC 574
Query: 783 GAAGTGKTLIA 815
G G GKTL+A
Sbjct: 575 GPPGCGKTLLA 585
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
N + DDI G + E V LPL P F+ + P +++ G GTGKTLIA
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIA 243
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
N + DDI G + E V LPL P F+ + P +++ G GTGKTLIA
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIA 243
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
N + DDI G + E V LPL P F+ + P +++ G GTGKTLIA
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIA 243
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V ++D+GG L + K+ V +R +LF + +K GI++YG+ G GKTLIA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALK-RSGIILYGSPGCGKTLIA 510
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V ++D+GG L + K+ V +R +LF + +K GI++YG+ G GKTLIA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALK-RSGIILYGSPGCGKTLIA 510
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
V ++D+GG L + K+ V +R +LF + +K GI++YG+ G GKTLIA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALK-RSGIILYGSPGCGKTLIA 510
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 729 PSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
P + +G+K GIL++G GTGKTL+A
Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 729 PSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
P + +G+K GIL++G GTGKTL+A
Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 729 PSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
P + +G+K GIL++G GTGKTL+A
Sbjct: 253 PEFIEQLGMKHVRGILLFGPPGTGKTLMA 281
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 693 QIKEMVELPLRHPSLFKAIGVKPHGGILMYGAAGTGKTLIA 815
+++E+V+ L+ P + +G + G+L+ G GTGKTL+A
Sbjct: 212 EVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLA 251
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 552 TDPSPFCIVAPDTVIHCDGEPIKREEEEE--ALNAVGYD 662
++P+P VAP+ + E + E+EE A+ +GYD
Sbjct: 153 SNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYD 191
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 85 IIRAFIICHFIQNLLLESKNYYNFY 11
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>Z83221-5|CAB05706.2| 578|Caenorhabditis elegans Hypothetical
protein C49A1.9 protein.
Length = 578
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHGGILM 779
VG DD GG + K ++PLRH +F I KP+ L+
Sbjct: 300 VGIDDNGGLEPRSFDWKP-AKIPLRHLDMFLKIIGKPYSDALL 341
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 50 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 199
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 50 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 199
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,098,261
Number of Sequences: 27780
Number of extensions: 430030
Number of successful extensions: 1272
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -