Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30595.Seq
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   7.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -1

Query: 165 INLVLLQLNIMVGKLLTHSFTSYLMKVLISSINYYTPTLQNVCMY 31
           ++ ++ QLN   G +L   FTS+ + +++S        + N  M+
Sbjct: 222 LSKLIKQLNATYGLILLLMFTSHFIFIVVSIFYMSAYLISNPIMW 266


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 222 QLVDIVXLSTRNLLTPLNFINLVLLQLNIMVGKLLTH 112
           QLV I  L+T+   T  +F NL     ++M+  L T+
Sbjct: 329 QLVAIRLLNTKLQFTAKDFFNLDWTFCHMMIAALTTY 365


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 116 VSSFPTIIFNCNKTK 160
           V+ FPT +  CNK K
Sbjct: 217 VTRFPTELTFCNKIK 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,493
Number of Sequences: 336
Number of extensions: 965
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)