Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30593.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   1.7  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    25   3.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   5.3  
DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.    23   9.2  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +2

Query: 503 NSVENVVHVQSTELKKEATLEAIGYICQD---IDAEVLTERSN 622
           NS+  V H+Q+  L++ A  E   Y  QD   I  E+  +RS+
Sbjct: 81  NSIGFVAHLQTVRLQRPAEAETDKYSAQDRRHIAGEIGLDRSH 123


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 487 HCPTGSSATATYAT 446
           HC TGS ATA Y T
Sbjct: 160 HCNTGSLATAGYGT 173


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +3

Query: 222 QNVVRCPSPRWNSQVARMAAGLQLKNHLTSKDPTLKQ 332
           QN      PR  S +A   +     NH+T+  P L Q
Sbjct: 418 QNSDMLHGPRGGSAIAATGSSTTTTNHVTNNIPDLPQ 454


>DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 199 TTNFTTFIKMLSDVLLQGGTVKWLGWQLVC 288
           T + T  IK    +  Q G  +W+ WQ  C
Sbjct: 109 TDDITNAIKCSKIIQQQNGFNEWVMWQKKC 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,564
Number of Sequences: 2352
Number of extensions: 13602
Number of successful extensions: 84
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)